RNA–Protein interactions for RNA: ENSMUST00000109024.8

Lima1-202, Transcript of LIM domain and actin-binding protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Lima1, Length 4,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1-202ENSMUST00000109024 Ubl4bQ9CQ84 188 aa13.29□□□□□ -0.28
Lima1-202ENSMUST00000109024 4933416C03RikQ3V063 378 aa13.29□□□□□ -0.28
Lima1-202ENSMUST00000109024 Rapgef2Q8CHG7 1496 aa13.27□□□□□ -0.28
Lima1-202ENSMUST00000109024 Hspa5P20029 655 aaKnown RBP13.24□□□□□ -0.29
Lima1-202ENSMUST00000109024 Os9Q8K2C7 672 aa13.24□□□□□ -0.29
Lima1-202ENSMUST00000109024 Wdr43Q6ZQL4 677 aaKnown RBP13.23□□□□□ -0.29
Lima1-202ENSMUST00000109024 P3h3Q8CG70 732 aa13.19□□□□□ -0.3
Lima1-202ENSMUST00000109024 Fkbp15Q6P9Q6 1216 aaKnown RBP13.17□□□□□ -0.3
Lima1-202ENSMUST00000109024 Bcl11aQ9QYE3 773 aa13.15□□□□□ -0.31
Lima1-202ENSMUST00000109024 Gm13697A2AK42 830 aa13.13□□□□□ -0.31
Lima1-202ENSMUST00000109024 Sin3aQ60520 1274 aaKnown RBP13.13□□□□□ -0.31
Lima1-202ENSMUST00000109024 Ifnlr1Q8CGK5 535 aa13.13□□□□□ -0.31
Lima1-202ENSMUST00000109024 Ccdc18Q640L5 1455 aa13.12□□□□□ -0.31
Lima1-202ENSMUST00000109024 DaxxO35613 739 aa13.1□□□□□ -0.31
Lima1-202ENSMUST00000109024 Rgl3Q3UYI5 709 aa13.09□□□□□ -0.31
Lima1-202ENSMUST00000109024 Baz1bQ9Z277 1479 aa13.09□□□□□ -0.31
Lima1-202ENSMUST00000109024 Mia2Q91ZV0 1396 aa13.08□□□□□ -0.32
Lima1-202ENSMUST00000109024 Rad21Q61550 635 aaKnown RBP13.07□□□□□ -0.32
Lima1-202ENSMUST00000109024 Cttnbp2B9EJA2 1648 aa13.06□□□□□ -0.32
Lima1-202ENSMUST00000109024 Wwc2Q6NXJ0 1187 aa13.06□□□□□ -0.32
Lima1-202ENSMUST00000109024 PrkcshO08795 521 aa13.05□□□□□ -0.32
Lima1-202ENSMUST00000109024 Prdm10Q3UTQ7 1184 aa13.05□□□□□ -0.32
Lima1-202ENSMUST00000109024 Erich6D3Z6S9 713 aa13.05□□□□□ -0.32
Lima1-202ENSMUST00000109024 Ofd1Q80Z25 1017 aa13.03□□□□□ -0.32
Lima1-202ENSMUST00000109024 Smarca4Q3TKT4 1613 aaKnown RBP13.02□□□□□ -0.33
Lima1-202ENSMUST00000109024 Aebp1Q640N1 1128 aa13.01□□□□□ -0.33
Lima1-202ENSMUST00000109024 Ercc6F8VPZ5 1481 aa13.01□□□□□ -0.33
Lima1-202ENSMUST00000109024 Grwd1Q810D6 446 aaKnown RBP13□□□□□ -0.33
Lima1-202ENSMUST00000109024 Pds5bQ4VA53 1446 aaKnown RBP12.99□□□□□ -0.33
Lima1-202ENSMUST00000109024 Cc2d2aQ8CFW7 1633 aa12.99□□□□□ -0.33
Lima1-202ENSMUST00000109024 Nlrp6Q91WS2 869 aa12.97□□□□□ -0.33
Lima1-202ENSMUST00000109024 Slc4a3P16283 1227 aa12.96□□□□□ -0.34
Lima1-202ENSMUST00000109024 Fyco1Q8VDC1 1437 aa12.96□□□□□ -0.34
Lima1-202ENSMUST00000109024 Arhgap35Q91YM2 1499 aa12.96□□□□□ -0.34
Lima1-202ENSMUST00000109024 Top2aQ01320 1528 aaKnown RBP12.95□□□□□ -0.34
Lima1-202ENSMUST00000109024 CntlnA2AM05 1397 aa12.95□□□□□ -0.34
Lima1-202ENSMUST00000109024 Upf2A2AT37 1269 aaKnown RBP12.94□□□□□ -0.34
Lima1-202ENSMUST00000109024 ArxO35085 564 aa12.94□□□□□ -0.34
Lima1-202ENSMUST00000109024 Pkd2O35245 966 aa12.94□□□□□ -0.34
Lima1-202ENSMUST00000109024 Card11Q8CIS0 1159 aa12.93□□□□□ -0.34
Lima1-202ENSMUST00000109024 Exoc6Q8R313 802 aa12.93□□□□□ -0.34
Lima1-202ENSMUST00000109024 Supt16hQ920B9 1047 aa12.93□□□□□ -0.34
Lima1-202ENSMUST00000109024 Nolc1E9Q5C9 702 aaKnown RBP12.92□□□□□ -0.34
Lima1-202ENSMUST00000109024 Polr3glQ8R0C0 218 aa12.92□□□□□ -0.34
Lima1-202ENSMUST00000109024 Mphosph9A6H5Y1 991 aa12.91□□□□□ -0.34
Lima1-202ENSMUST00000109024 Ncapd3Q6ZQK0 1506 aa12.91□□□□□ -0.34
Lima1-202ENSMUST00000109024 Cwc22Q8C5N3 908 aaKnown RBP12.9□□□□□ -0.34
Lima1-202ENSMUST00000109024 Cabp1Q9JLK7 227 aa12.9□□□□□ -0.34
Lima1-202ENSMUST00000109024 Atad2bE9Q166 1460 aaKnown RBP12.9□□□□□ -0.34
Lima1-202ENSMUST00000109024 Kif27Q7M6Z4 1394 aa12.89□□□□□ -0.35
Lima1-202ENSMUST00000109024 Arhgap27A2AB59 869 aa12.88□□□□□ -0.35
Lima1-202ENSMUST00000109024 Mtus2Q3UHD3 1353 aa12.87□□□□□ -0.35
Lima1-202ENSMUST00000109024 Znf710Q3U288 666 aa12.87□□□□□ -0.35
Lima1-202ENSMUST00000109024 Clstn2Q9ER65 966 aa12.86□□□□□ -0.35
Lima1-202ENSMUST00000109024 Carmil1Q6EDY6 1374 aa12.85□□□□□ -0.35
Lima1-202ENSMUST00000109024 Smg6P61406 1418 aaKnown RBP12.85□□□□□ -0.35
Lima1-202ENSMUST00000109024 Iqgap2Q3UQ44 1575 aa12.85□□□□□ -0.35
Lima1-202ENSMUST00000109024 Arap1Q4LDD4 1452 aa12.85□□□□□ -0.35
Lima1-202ENSMUST00000109024 Cux2P70298 1426 aa12.84□□□□□ -0.35
Lima1-202ENSMUST00000109024 Top2bQ64511 1612 aa12.84□□□□□ -0.35
Lima1-202ENSMUST00000109024 Rundc1Q0VDN7 615 aa12.83□□□□□ -0.36
Lima1-202ENSMUST00000109024 Hsp90aa1P07901 733 aaKnown RBP12.82□□□□□ -0.36
Lima1-202ENSMUST00000109024 CanxP35564 591 aaKnown RBP12.82□□□□□ -0.36
Lima1-202ENSMUST00000109024 Ccdc27Q3V036 639 aa12.82□□□□□ -0.36
Lima1-202ENSMUST00000109024 Gm13695A2AK44 830 aa12.81□□□□□ -0.36
Lima1-202ENSMUST00000109024 Ccnb3Q810T2 1396 aa12.81□□□□□ -0.36
Lima1-202ENSMUST00000109024 Apbb1Q9QXJ1 710 aa12.8□□□□□ -0.36
Lima1-202ENSMUST00000109024 Naip1Q9QWK5 1403 aa12.79□□□□□ -0.36
Lima1-202ENSMUST00000109024 Atp1b4Q99ME6 356 aa12.79□□□□□ -0.36
Lima1-202ENSMUST00000109024 PtprkP35822 1457 aa12.79□□□□□ -0.36
Lima1-202ENSMUST00000109024 Rangap1P46061 589 aaKnown RBP12.79□□□□□ -0.36
Lima1-202ENSMUST00000109024 Trak1Q6PD31 939 aa12.79□□□□□ -0.36
Lima1-202ENSMUST00000109024 Hdac5Q9Z2V6 1113 aa12.79□□□□□ -0.36
Lima1-202ENSMUST00000109024 Kdm2aP59997 1161 aa12.78□□□□□ -0.36
Lima1-202ENSMUST00000109024 Rpap1Q80TE0 1409 aa12.77□□□□□ -0.36
Lima1-202ENSMUST00000109024 Tcerg1Q8CGF7 1100 aaKnown RBP12.77□□□□□ -0.37
Lima1-202ENSMUST00000109024 Rrp7aQ9D1C9 280 aaKnown RBP12.77□□□□□ -0.37
Lima1-202ENSMUST00000109024 BicraF8VPZ9 1578 aa12.77□□□□□ -0.37
Lima1-202ENSMUST00000109024 Shroom4Q1W617 1475 aa12.77□□□□□ -0.37
Lima1-202ENSMUST00000109024 Mroh3A0A1D5RM54 893 aa12.74□□□□□ -0.37
Lima1-202ENSMUST00000109024 Trim30dE9PWL0 497 aa12.74□□□□□ -0.37
Lima1-202ENSMUST00000109024 Dbr1Q923B1 550 aa12.74□□□□□ -0.37
Lima1-202ENSMUST00000109024 LrpprcQ6PB66 1392 aaKnown RBP12.74□□□□□ -0.37
Lima1-202ENSMUST00000109024 B4galnt3Q6L8S8 986 aa12.74□□□□□ -0.37
Lima1-202ENSMUST00000109024 Fhad1A6PWD2 1420 aa12.74□□□□□ -0.37
Lima1-202ENSMUST00000109024 Map4P27546 1125 aaKnown RBP12.74□□□□□ -0.37
Lima1-202ENSMUST00000109024 Arhgef5E9Q7D5 1581 aa12.73□□□□□ -0.37
Lima1-202ENSMUST00000109024 Usp47Q8BY87 1376 aa12.73□□□□□ -0.37
Lima1-202ENSMUST00000109024 Neurod2Q62414 383 aa12.73□□□□□ -0.37
Lima1-202ENSMUST00000109024 Ccdc9Q8VC31 543 aaKnown RBP12.72□□□□□ -0.37
Lima1-202ENSMUST00000109024 Ankrd36D3Z4K0 1415 aa12.71□□□□□ -0.37
Lima1-202ENSMUST00000109024 Trim26Q99PN3 545 aa12.71□□□□□ -0.37
Lima1-202ENSMUST00000109024 Zscan21Q07231 555 aa12.69□□□□□ -0.38
Lima1-202ENSMUST00000109024 UacaQ8CGB3 1411 aa12.69□□□□□ -0.38
Lima1-202ENSMUST00000109024 Phldb1Q6PDH0 1371 aaKnown RBP12.69□□□□□ -0.38
Lima1-202ENSMUST00000109024 Hsp90ab1P11499 724 aaKnown RBP12.67□□□□□ -0.38
Lima1-202ENSMUST00000109024 NrkQ9R0G8 1455 aa12.66□□□□□ -0.38
Lima1-202ENSMUST00000109024 Vps8Q0P5W1 1427 aa12.66□□□□□ -0.38
Lima1-202ENSMUST00000109024 Mak16Q8BGS0 296 aaKnown RBP12.66□□□□□ -0.38
Lima1-202ENSMUST00000109024 Zfp644E9QA22 1323 aa12.65□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 8.5 ms