RNA–Protein interactions for RNA: ENSMUST00000103571.1

Trav6-1-201, Transcript of T cell receptor alpha variable 6-1 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav6-1, Length 338 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1-201ENSMUST00000103571 Ccdc88bQ4QRL3 1481 aa10.42□□□□□ -0.74
Trav6-1-201ENSMUST00000103571 Setbp1Q9Z180 1582 aa10.41□□□□□ -0.74
Trav6-1-201ENSMUST00000103571 Ccdc136Q3TVA9 1136 aa10.41□□□□□ -0.74
Trav6-1-201ENSMUST00000103571 Brwd3A2AHJ4 1799 aa10.41□□□□□ -0.74
Trav6-1-201ENSMUST00000103571 Fgd6Q69ZL1 1399 aa10.4□□□□□ -0.74
Trav6-1-201ENSMUST00000103571 Ccdc18Q640L5 1455 aa10.37□□□□□ -0.75
Trav6-1-201ENSMUST00000103571 Cc2d2bA0A286YDU8 1405 aa10.33□□□□□ -0.76
Trav6-1-201ENSMUST00000103571 PogzQ8BZH4 1409 aaKnown RBP10.33□□□□□ -0.76
Trav6-1-201ENSMUST00000103571 Nup160Q9Z0W3 1402 aaKnown RBP10.33□□□□□ -0.76
Trav6-1-201ENSMUST00000103571 Duox2A2AQ99 1517 aa10.33□□□□□ -0.76
Trav6-1-201ENSMUST00000103571 GapdhsQ64467 440 aa10.32□□□□□ -0.76
Trav6-1-201ENSMUST00000103571 AdgbG3UZ78 1657 aa10.31□□□□□ -0.76
Trav6-1-201ENSMUST00000103571 Golga3P55937 1487 aa10.31□□□□□ -0.76
Trav6-1-201ENSMUST00000103571 Rad54l2Q99NG0 1466 aa10.3□□□□□ -0.76
Trav6-1-201ENSMUST00000103571 Arhgef11Q68FM7 1552 aa10.29□□□□□ -0.76
Trav6-1-201ENSMUST00000103571 Arid3cA6PWV5 409 aa10.28□□□□□ -0.76
Trav6-1-201ENSMUST00000103571 Samd9lQ69Z37 1561 aa10.27□□□□□ -0.76
Trav6-1-201ENSMUST00000103571 Soga1E1U8D0 1418 aa10.27□□□□□ -0.77
Trav6-1-201ENSMUST00000103571 Pbrm1Q8BSQ9 1634 aaKnown RBP10.26□□□□□ -0.77
Trav6-1-201ENSMUST00000103571 AqrQ8CFQ3 1481 aaKnown RBP10.26□□□□□ -0.77
Trav6-1-201ENSMUST00000103571 Depdc5P61460 1591 aa10.26□□□□□ -0.77
Trav6-1-201ENSMUST00000103571 Mapkbp1Q6NS57 1503 aa10.25□□□□□ -0.77
Trav6-1-201ENSMUST00000103571 Ttc37F8VPK0 1563 aa10.25□□□□□ -0.77
Trav6-1-201ENSMUST00000103571 Fndc1E9Q043 1732 aa10.24□□□□□ -0.77
Trav6-1-201ENSMUST00000103571 CadpsQ80TJ1 1355 aa10.22□□□□□ -0.77
Trav6-1-201ENSMUST00000103571 Fkbp15Q6P9Q6 1216 aaKnown RBP10.21□□□□□ -0.77
Trav6-1-201ENSMUST00000103571 AI481877A2ALV5 1481 aa10.2□□□□□ -0.78
Trav6-1-201ENSMUST00000103571 EprsQ8CGC7 1512 aaKnown RBP10.2□□□□□ -0.78
Trav6-1-201ENSMUST00000103571 Grin2aP35436 1464 aa10.19□□□□□ -0.78
Trav6-1-201ENSMUST00000103571 Arhgap27A2AB59 869 aa10.19□□□□□ -0.78
Trav6-1-201ENSMUST00000103571 Neo1P97798 1493 aa10.18□□□□□ -0.78
Trav6-1-201ENSMUST00000103571 TnnQ80Z71 1560 aa10.18□□□□□ -0.78
Trav6-1-201ENSMUST00000103571 Clasp1Q80TV8 1535 aaKnown RBP10.17□□□□□ -0.78
Trav6-1-201ENSMUST00000103571 Magi3Q9EQJ9 1476 aa10.17□□□□□ -0.78
Trav6-1-201ENSMUST00000103571 Kdm6bQ5NCY0 1641 aa10.15□□□□□ -0.78
Trav6-1-201ENSMUST00000103571 BC005561E9Q5E2 1589 aa10.15□□□□□ -0.78
Trav6-1-201ENSMUST00000103571 Dnmt1P13864 1620 aaKnown RBP10.15□□□□□ -0.79
Trav6-1-201ENSMUST00000103571 Gm14025A2AP89 1413 aa10.12□□□□□ -0.79
Trav6-1-201ENSMUST00000103571 Kif7B7ZNG0 1348 aa10.08□□□□□ -0.8
Trav6-1-201ENSMUST00000103571 Grin2bQ01097 1482 aa10.08□□□□□ -0.8
Trav6-1-201ENSMUST00000103571 Znf608Q56A10 1511 aa10.07□□□□□ -0.8
Trav6-1-201ENSMUST00000103571 Zfyve16Q80U44 1528 aa10.07□□□□□ -0.8
Trav6-1-201ENSMUST00000103571 MyclP10166 368 aa10.07□□□□□ -0.8
Trav6-1-201ENSMUST00000103571 Cngb1E1AZ71 1325 aa10.06□□□□□ -0.8
Trav6-1-201ENSMUST00000103571 Abcc2Q8VI47 1543 aa10.05□□□□□ -0.8
Trav6-1-201ENSMUST00000103571 Abca16E9PWJ7 1678 aa10.04□□□□□ -0.8
Trav6-1-201ENSMUST00000103571 Pla2r1Q62028 1487 aa10.04□□□□□ -0.8
Trav6-1-201ENSMUST00000103571 NrkQ9R0G8 1455 aa10.03□□□□□ -0.8
Trav6-1-201ENSMUST00000103571 PtprmP28828 1452 aa10.02□□□□□ -0.81
Trav6-1-201ENSMUST00000103571 Arhgef12Q8R4H2 1543 aaKnown RBP10.02□□□□□ -0.81
Trav6-1-201ENSMUST00000103571 WizO88286 1684 aaKnown RBP10.01□□□□□ -0.81
Trav6-1-201ENSMUST00000103571 PxdnQ3UQ28 1475 aa10□□□□□ -0.81
Trav6-1-201ENSMUST00000103571 Rnf17Q99MV7 1640 aa10□□□□□ -0.81
Trav6-1-201ENSMUST00000103571 Lrrc9Q8CDN9 1456 aa9.99□□□□□ -0.81
Trav6-1-201ENSMUST00000103571 Map3k4O08648 1597 aa9.98□□□□□ -0.81
Trav6-1-201ENSMUST00000103571 Jph4Q80WT0 628 aa9.97□□□□□ -0.81
Trav6-1-201ENSMUST00000103571 Efcab5A0JP43 1406 aa9.97□□□□□ -0.81
Trav6-1-201ENSMUST00000103571 Naip2Q9QUK4 1447 aa9.97□□□□□ -0.81
Trav6-1-201ENSMUST00000103571 Pip4k2bQ80XI4 416 aa9.95□□□□□ -0.82
Trav6-1-201ENSMUST00000103571 Eif4g1Q6NZJ6 1600 aaKnown RBP9.95□□□□□ -0.82
Trav6-1-201ENSMUST00000103571 Qser1A2BIE1 1698 aa9.94□□□□□ -0.82
Trav6-1-201ENSMUST00000103571 Scn4aQ9ER60 1841 aa9.93□□□□□ -0.82
Trav6-1-201ENSMUST00000103571 Ahdc1Q6PAL7 1594 aaKnown RBP9.92□□□□□ -0.82
Trav6-1-201ENSMUST00000103571 Zeb1Q64318 1117 aa9.91□□□□□ -0.82
Trav6-1-201ENSMUST00000103571 TchhA0A0B4J1F9 1599 aa9.91□□□□□ -0.82
Trav6-1-201ENSMUST00000103571 Slx4Q6P1D7 1565 aa9.91□□□□□ -0.82
Trav6-1-201ENSMUST00000103571 Fmn1Q05860 1466 aa9.91□□□□□ -0.82
Trav6-1-201ENSMUST00000103571 SphkapQ6NSW3 1687 aa9.9□□□□□ -0.82
Trav6-1-201ENSMUST00000103571 SynmQ70IV5 1561 aa9.88□□□□□ -0.83
Trav6-1-201ENSMUST00000103571 Shroom4Q1W617 1475 aa9.87□□□□□ -0.83
Trav6-1-201ENSMUST00000103571 Neurl4Q5NCX5 1563 aa9.87□□□□□ -0.83
Trav6-1-201ENSMUST00000103571 Hspa1lP16627 641 aa9.85□□□□□ -0.83
Trav6-1-201ENSMUST00000103571 Safb2Q80YR5 991 aaKnown RBP9.85□□□□□ -0.83
Trav6-1-201ENSMUST00000103571 Igf1rQ60751 1373 aa9.85□□□□□ -0.83
Trav6-1-201ENSMUST00000103571 Wdr7Q920I9 1489 aa9.85□□□□□ -0.83
Trav6-1-201ENSMUST00000103571 Rpap1Q80TE0 1409 aa9.84□□□□□ -0.83
Trav6-1-201ENSMUST00000103571 AglF8VPN4 1532 aa9.84□□□□□ -0.83
Trav6-1-201ENSMUST00000103571 Ildr2B5TVM2 661 aa9.84□□□□□ -0.83
Trav6-1-201ENSMUST00000103571 Gpatch8A2A6A1 1505 aa9.82□□□□□ -0.84
Trav6-1-201ENSMUST00000103571 Kif14L0N7N1 1674 aaKnown RBP9.82□□□□□ -0.84
Trav6-1-201ENSMUST00000103571 Adamtsl3G3UXC7 1706 aa9.81□□□□□ -0.84
Trav6-1-201ENSMUST00000103571 Cul7Q8VE73 1689 aa9.8□□□□□ -0.84
Trav6-1-201ENSMUST00000103571 Camsap2Q8C1B1 1461 aa9.8□□□□□ -0.84
Trav6-1-201ENSMUST00000103571 Supt6hQ62383 1726 aaKnown RBP9.8□□□□□ -0.84
Trav6-1-201ENSMUST00000103571 Adamts12Q811B3 1600 aa9.8□□□□□ -0.84
Trav6-1-201ENSMUST00000103571 Abca5Q8K448 1642 aa9.77□□□□□ -0.85
Trav6-1-201ENSMUST00000103571 A2mQ6GQT1 1474 aa9.77□□□□□ -0.85
Trav6-1-201ENSMUST00000103571 Atp10dQ8K2X1 1416 aa9.75□□□□□ -0.85
Trav6-1-201ENSMUST00000103571 Kdm5bQ80Y84 1544 aa9.75□□□□□ -0.85
Trav6-1-201ENSMUST00000103571 Cul9Q80TT8 1865 aa9.74□□□□□ -0.85
Trav6-1-201ENSMUST00000103571 Atp10aO54827 1508 aa9.74□□□□□ -0.85
Trav6-1-201ENSMUST00000103571 Dip2aQ8BWT5 1523 aa9.73□□□□□ -0.85
Trav6-1-201ENSMUST00000103571 NhsB1AV60 1647 aa9.72□□□□□ -0.85
Trav6-1-201ENSMUST00000103571 Fbln2P37889 1221 aa9.72□□□□□ -0.85
Trav6-1-201ENSMUST00000103571 WrnO09053 1401 aa9.72□□□□□ -0.85
Trav6-1-201ENSMUST00000103571 Abca8bQ8K440 1620 aa9.71□□□□□ -0.85
Trav6-1-201ENSMUST00000103571 Bcl11bQ99PV8 884 aa9.7□□□□□ -0.86
Trav6-1-201ENSMUST00000103571 Rrbp1Q99PL5 1605 aaKnown RBP9.7□□□□□ -0.86
Trav6-1-201ENSMUST00000103571 Ltbp4Q8K4G1 1666 aa9.68□□□□□ -0.86
Trav6-1-201ENSMUST00000103571 Gm7298A0A0N4SVU1 1476 aa9.68□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms