RNA–Protein interactions for RNA: ENSMUST00000103571.1

Trav6-1-201, Transcript of T cell receptor alpha variable 6-1 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav6-1, Length 338 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1-201ENSMUST00000103571 Abcc9P70170 1546 aa13.75□□□□□ -0.21
Trav6-1-201ENSMUST00000103571 Gm35339A0A140LHH9 1649 aa13.61□□□□□ -0.23
Trav6-1-201ENSMUST00000103571 Dnajc5bQ9CQ94 199 aa13.28□□□□□ -0.28
Trav6-1-201ENSMUST00000103571 NischQ80TM9 1593 aa13.22□□□□□ -0.29
Trav6-1-201ENSMUST00000103571 ScribQ80U72 1612 aa13.04□□□□□ -0.32
Trav6-1-201ENSMUST00000103571 Abcc8B2RUS7 1588 aa12.96□□□□□ -0.33
Trav6-1-201ENSMUST00000103571 Dnajc5P60904 198 aa12.58□□□□□ -0.4
Trav6-1-201ENSMUST00000103571 NacadQ5SWP3 1504 aa12.39□□□□□ -0.43
Trav6-1-201ENSMUST00000103571 Kdm5dQ62240 1548 aa12.39□□□□□ -0.43
Trav6-1-201ENSMUST00000103571 Trim41Q5NCC3 630 aa12.32□□□□□ -0.44
Trav6-1-201ENSMUST00000103571 BicraF8VPZ9 1578 aa12.27□□□□□ -0.44
Trav6-1-201ENSMUST00000103571 Sycp2Q9CUU3 1500 aa12.21□□□□□ -0.45
Trav6-1-201ENSMUST00000103571 Thoc2B1AZI6 1594 aaKnown RBP12.18□□□□□ -0.46
Trav6-1-201ENSMUST00000103571 Cc2d2aQ8CFW7 1633 aa12.06□□□□□ -0.48
Trav6-1-201ENSMUST00000103571 Pds5bQ4VA53 1446 aaKnown RBP11.94□□□□□ -0.5
Trav6-1-201ENSMUST00000103571 Ercc6F8VPZ5 1481 aa11.71□□□□□ -0.53
Trav6-1-201ENSMUST00000103571 Fam135aQ6NS59 1506 aa11.7□□□□□ -0.54
Trav6-1-201ENSMUST00000103571 Atad2bE9Q166 1460 aaKnown RBP11.68□□□□□ -0.54
Trav6-1-201ENSMUST00000103571 Dcaf1Q80TR8 1506 aa11.66□□□□□ -0.54
Trav6-1-201ENSMUST00000103571 Ubl4bQ9CQ84 188 aa11.58□□□□□ -0.56
Trav6-1-201ENSMUST00000103571 Smarca2Q6DIC0 1577 aa11.53□□□□□ -0.56
Trav6-1-201ENSMUST00000103571 Rb1cc1Q9ESK9 1588 aa11.49□□□□□ -0.57
Trav6-1-201ENSMUST00000103571 Mrc2Q64449 1479 aa11.47□□□□□ -0.57
Trav6-1-201ENSMUST00000103571 Phldb1Q6PDH0 1371 aaKnown RBP11.47□□□□□ -0.57
Trav6-1-201ENSMUST00000103571 Pcdh10E9PXQ7 1057 aa11.46□□□□□ -0.57
Trav6-1-201ENSMUST00000103571 Col17a1Q07563 1470 aa11.44□□□□□ -0.58
Trav6-1-201ENSMUST00000103571 Frmpd1A2AKB4 1549 aa11.44□□□□□ -0.58
Trav6-1-201ENSMUST00000103571 Iqgap2Q3UQ44 1575 aa11.42□□□□□ -0.58
Trav6-1-201ENSMUST00000103571 Unc13aQ4KUS2 1712 aa11.41□□□□□ -0.58
Trav6-1-201ENSMUST00000103571 Wdr62Q3U3T8 1523 aa11.4□□□□□ -0.58
Trav6-1-201ENSMUST00000103571 Lrriq1Q0P5X1 1673 aa11.4□□□□□ -0.59
Trav6-1-201ENSMUST00000103571 Smarca4Q3TKT4 1613 aaKnown RBP11.35□□□□□ -0.59
Trav6-1-201ENSMUST00000103571 Shroom2A2ALU4 1481 aa11.33□□□□□ -0.6
Trav6-1-201ENSMUST00000103571 Zcchc6Q5BLK4 1491 aaKnown RBP11.31□□□□□ -0.6
Trav6-1-201ENSMUST00000103571 Pelp1Q9DBD5 1123 aaKnown RBP11.24□□□□□ -0.61
Trav6-1-201ENSMUST00000103571 Pabpn1Q8CCS6 302 aaKnown RBP11.23□□□□□ -0.61
Trav6-1-201ENSMUST00000103571 Rsf1E9PWW9 1441 aaKnown RBP11.23□□□□□ -0.61
Trav6-1-201ENSMUST00000103571 Cecr2E9Q2Z1 1453 aa11.23□□□□□ -0.61
Trav6-1-201ENSMUST00000103571 Baz1bQ9Z277 1479 aa11.23□□□□□ -0.61
Trav6-1-201ENSMUST00000103571 Baz1aO88379 1555 aa11.19□□□□□ -0.62
Trav6-1-201ENSMUST00000103571 Top2bQ64511 1612 aa11.18□□□□□ -0.62
Trav6-1-201ENSMUST00000103571 Kif21aQ9QXL2 1672 aa11.14□□□□□ -0.63
Trav6-1-201ENSMUST00000103571 Eif4g3Q80XI3 1579 aaKnown RBP11.12□□□□□ -0.63
Trav6-1-201ENSMUST00000103571 Ttbk1Q6PCN3 1308 aa11.09□□□□□ -0.63
Trav6-1-201ENSMUST00000103571 Crybg2B7ZCC2 1516 aa11.09□□□□□ -0.63
Trav6-1-201ENSMUST00000103571 Rhox8Q6VSS7 320 aa11.08□□□□□ -0.64
Trav6-1-201ENSMUST00000103571 Arhgef5E9Q7D5 1581 aa11.07□□□□□ -0.64
Trav6-1-201ENSMUST00000103571 Cypt1Q8CH20 168 aa11.04□□□□□ -0.64
Trav6-1-201ENSMUST00000103571 Ccdc180J3QNE4 1664 aa11.04□□□□□ -0.64
Trav6-1-201ENSMUST00000103571 Zcchc11B2RX14 1644 aaKnown RBP10.98□□□□□ -0.65
Trav6-1-201ENSMUST00000103571 Cux2P70298 1426 aa10.97□□□□□ -0.65
Trav6-1-201ENSMUST00000103571 Plekhg3Q4VAC9 1341 aa10.93□□□□□ -0.66
Trav6-1-201ENSMUST00000103571 Urb2E9Q7L1 1524 aaKnown RBP10.89□□□□□ -0.67
Trav6-1-201ENSMUST00000103571 Plb1Q3TTY0 1478 aa10.88□□□□□ -0.67
Trav6-1-201ENSMUST00000103571 Mapk8ip2Q9ERE9 830 aa10.87□□□□□ -0.67
Trav6-1-201ENSMUST00000103571 Adgrl3Q80TS3 1537 aa10.87□□□□□ -0.67
Trav6-1-201ENSMUST00000103571 Npm1Q61937 292 aaKnown RBP10.83□□□□□ -0.68
Trav6-1-201ENSMUST00000103571 Kif15Q6P9L6 1387 aa10.82□□□□□ -0.68
Trav6-1-201ENSMUST00000103571 PtprtQ99M80 1454 aa10.8□□□□□ -0.68
Trav6-1-201ENSMUST00000103571 Gm156Q58A37 223 aa10.79□□□□□ -0.68
Trav6-1-201ENSMUST00000103571 PtprkP35822 1457 aa10.74□□□□□ -0.69
Trav6-1-201ENSMUST00000103571 Cep170Q6A065 1588 aa10.73□□□□□ -0.69
Trav6-1-201ENSMUST00000103571 Plppr3Q7TPB0 716 aa10.72□□□□□ -0.69
Trav6-1-201ENSMUST00000103571 Rusc2Q80U22 1514 aa10.71□□□□□ -0.69
Trav6-1-201ENSMUST00000103571 Il27Q8K3I6 234 aa10.71□□□□□ -0.69
Trav6-1-201ENSMUST00000103571 Synj1Q8CHC4 1574 aa10.7□□□□□ -0.7
Trav6-1-201ENSMUST00000103571 Cttnbp2B9EJA2 1648 aa10.69□□□□□ -0.7
Trav6-1-201ENSMUST00000103571 CftrP26361 1476 aa10.69□□□□□ -0.7
Trav6-1-201ENSMUST00000103571 Dhx29Q6PGC1 1365 aaKnown RBP10.66□□□□□ -0.7
Trav6-1-201ENSMUST00000103571 Pprc1Q6NZN1 1644 aa10.66□□□□□ -0.7
Trav6-1-201ENSMUST00000103571 Gapvd1Q6PAR5 1458 aa10.65□□□□□ -0.7
Trav6-1-201ENSMUST00000103571 Cyb5rlB1AS42 316 aa10.64□□□□□ -0.71
Trav6-1-201ENSMUST00000103571 Esf1Q3V1V3 845 aaKnown RBP10.64□□□□□ -0.71
Trav6-1-201ENSMUST00000103571 Ppp1r18Q8BQ30 594 aa10.64□□□□□ -0.71
Trav6-1-201ENSMUST00000103571 Cep164Q5DU05 1446 aa10.64□□□□□ -0.71
Trav6-1-201ENSMUST00000103571 Setd1bQ8CFT2 1985 aa10.63□□□□□ -0.71
Trav6-1-201ENSMUST00000103571 Crocc2F6XLV1 1638 aa10.61□□□□□ -0.71
Trav6-1-201ENSMUST00000103571 Fbxo41Q6NS60 873 aa10.59□□□□□ -0.71
Trav6-1-201ENSMUST00000103571 Chic1Q8CBW7 227 aa10.58□□□□□ -0.72
Trav6-1-201ENSMUST00000103571 Alpk3Q924C5 1678 aa10.53□□□□□ -0.72
Trav6-1-201ENSMUST00000103571 Lamc3Q9R0B6 1581 aa10.53□□□□□ -0.72
Trav6-1-201ENSMUST00000103571 MlecQ6ZQI3 291 aaKnown RBP10.53□□□□□ -0.72
Trav6-1-201ENSMUST00000103571 Ift140E9PY46 1464 aa10.53□□□□□ -0.72
Trav6-1-201ENSMUST00000103571 Ifnlr1Q8CGK5 535 aa10.52□□□□□ -0.73
Trav6-1-201ENSMUST00000103571 Ecm2Q5FW85 670 aa10.5□□□□□ -0.73
Trav6-1-201ENSMUST00000103571 Camsap1A2AHC3 1581 aa10.5□□□□□ -0.73
Trav6-1-201ENSMUST00000103571 Ak9G3UYQ4 1894 aa10.5□□□□□ -0.73
Trav6-1-201ENSMUST00000103571 Rtl1Q7M732 1744 aa10.5□□□□□ -0.73
Trav6-1-201ENSMUST00000103571 Rapgef2Q8CHG7 1496 aa10.49□□□□□ -0.73
Trav6-1-201ENSMUST00000103571 Hecw2Q6I6G8 1578 aa10.49□□□□□ -0.73
Trav6-1-201ENSMUST00000103571 Dnajc5gQ8C632 165 aa10.48□□□□□ -0.73
Trav6-1-201ENSMUST00000103571 LrpprcQ6PB66 1392 aaKnown RBP10.47□□□□□ -0.73
Trav6-1-201ENSMUST00000103571 Ythdc2B2RR83 1445 aaKnown RBP10.47□□□□□ -0.73
Trav6-1-201ENSMUST00000103571 Ercc6l2Q9JIM3 1537 aa10.47□□□□□ -0.73
Trav6-1-201ENSMUST00000103571 AknaQ80VW7 1404 aa10.46□□□□□ -0.74
Trav6-1-201ENSMUST00000103571 Disp1Q3TDN0 1521 aa10.44□□□□□ -0.74
Trav6-1-201ENSMUST00000103571 Chd1P40201 1711 aa10.44□□□□□ -0.74
Trav6-1-201ENSMUST00000103571 Top2aQ01320 1528 aaKnown RBP10.43□□□□□ -0.74
Trav6-1-201ENSMUST00000103571 Brd4Q9ESU6 1400 aaKnown RBP10.42□□□□□ -0.74
Trav6-1-201ENSMUST00000103571 Abcc1O35379 1528 aa10.42□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 60.7 ms