RNA–Protein interactions for RNA: ENSMUST00000092849.11

Lig3-203, Transcript of DNA ligase 3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Lig3, Length 4,560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-203ENSMUST00000092849 Ifnlr1Q8CGK5 535 aa13.17□□□□□ -0.3
Lig3-203ENSMUST00000092849 Anp32bQ9EST5 272 aaKnown RBP13.15□□□□□ -0.3
Lig3-203ENSMUST00000092849 Tnnt3Q9QZ47 272 aa13.15□□□□□ -0.3
Lig3-203ENSMUST00000092849 Lmod2Q3UHZ5 550 aa13.13□□□□□ -0.31
Lig3-203ENSMUST00000092849 Rapgef2Q8CHG7 1496 aa13.11□□□□□ -0.31
Lig3-203ENSMUST00000092849 Unc13aQ4KUS2 1712 aa13.11□□□□□ -0.31
Lig3-203ENSMUST00000092849 Kif21aQ9QXL2 1672 aa13.11□□□□□ -0.31
Lig3-203ENSMUST00000092849 Myt1Q8CFC2 1127 aa13.1□□□□□ -0.31
Lig3-203ENSMUST00000092849 Fgd6Q69ZL1 1399 aa13.1□□□□□ -0.31
Lig3-203ENSMUST00000092849 Pcgf6Q99NA9 353 aa13.09□□□□□ -0.31
Lig3-203ENSMUST00000092849 Polr1aO35134 1717 aaKnown RBP13.09□□□□□ -0.31
Lig3-203ENSMUST00000092849 Rad54l2Q99NG0 1466 aa13.09□□□□□ -0.31
Lig3-203ENSMUST00000092849 NrdcQ8BHG1 1161 aa13.07□□□□□ -0.32
Lig3-203ENSMUST00000092849 Slc24a1Q91WD8 1130 aa13.06□□□□□ -0.32
Lig3-203ENSMUST00000092849 Map3k1P53349 1493 aa13.06□□□□□ -0.32
Lig3-203ENSMUST00000092849 Fyco1Q8VDC1 1437 aa13.06□□□□□ -0.32
Lig3-203ENSMUST00000092849 NclP09405 707 aaKnown RBP13.05□□□□□ -0.32
Lig3-203ENSMUST00000092849 Plekhg3Q4VAC9 1341 aa13.05□□□□□ -0.32
Lig3-203ENSMUST00000092849 Fam50aQ9WV03 339 aaKnown RBP13.03□□□□□ -0.32
Lig3-203ENSMUST00000092849 Nop58Q6DFW4 536 aaKnown RBP13.03□□□□□ -0.32
Lig3-203ENSMUST00000092849 Kif27Q7M6Z4 1394 aa13.02□□□□□ -0.32
Lig3-203ENSMUST00000092849 Mroh2bQ7M6Y6 1581 aa13.02□□□□□ -0.33
Lig3-203ENSMUST00000092849 BlmO88700 1416 aa13.02□□□□□ -0.33
Lig3-203ENSMUST00000092849 SynmQ70IV5 1561 aa13.02□□□□□ -0.33
Lig3-203ENSMUST00000092849 Soga1E1U8D0 1418 aa13.01□□□□□ -0.33
Lig3-203ENSMUST00000092849 Mier1Q5UAK0 511 aa13.01□□□□□ -0.33
Lig3-203ENSMUST00000092849 CadpsQ80TJ1 1355 aa13□□□□□ -0.33
Lig3-203ENSMUST00000092849 Lrriq1Q0P5X1 1673 aa13□□□□□ -0.33
Lig3-203ENSMUST00000092849 Grin2aP35436 1464 aa12.99□□□□□ -0.33
Lig3-203ENSMUST00000092849 Amer1Q7TS75 1132 aa12.99□□□□□ -0.33
Lig3-203ENSMUST00000092849 Aebp1Q640N1 1128 aa12.98□□□□□ -0.33
Lig3-203ENSMUST00000092849 Plppr3Q7TPB0 716 aa12.98□□□□□ -0.33
Lig3-203ENSMUST00000092849 Dhx57Q6P5D3 1388 aaKnown RBP12.98□□□□□ -0.33
Lig3-203ENSMUST00000092849 PtprkP35822 1457 aa12.97□□□□□ -0.33
Lig3-203ENSMUST00000092849 AqrQ8CFQ3 1481 aaKnown RBP12.96□□□□□ -0.33
Lig3-203ENSMUST00000092849 TonslQ6NZL6 1363 aa12.96□□□□□ -0.33
Lig3-203ENSMUST00000092849 Arhgap35Q91YM2 1499 aa12.96□□□□□ -0.34
Lig3-203ENSMUST00000092849 CntlnA2AM05 1397 aa12.95□□□□□ -0.34
Lig3-203ENSMUST00000092849 Jph4Q80WT0 628 aa12.95□□□□□ -0.34
Lig3-203ENSMUST00000092849 Disp1Q3TDN0 1521 aa12.94□□□□□ -0.34
Lig3-203ENSMUST00000092849 Pbrm1Q8BSQ9 1634 aaKnown RBP12.94□□□□□ -0.34
Lig3-203ENSMUST00000092849 EprsQ8CGC7 1512 aaKnown RBP12.94□□□□□ -0.34
Lig3-203ENSMUST00000092849 TchhA0A0B4J1F9 1599 aa12.94□□□□□ -0.34
Lig3-203ENSMUST00000092849 Ppp1r18Q8BQ30 594 aa12.93□□□□□ -0.34
Lig3-203ENSMUST00000092849 WrnO09053 1401 aa12.93□□□□□ -0.34
Lig3-203ENSMUST00000092849 NeflP08551 543 aa12.93□□□□□ -0.34
Lig3-203ENSMUST00000092849 Eif4g3Q80XI3 1579 aaKnown RBP12.92□□□□□ -0.34
Lig3-203ENSMUST00000092849 Gm7298A0A0N4SVU1 1476 aa12.91□□□□□ -0.34
Lig3-203ENSMUST00000092849 Ncoa2Q61026 1462 aa12.91□□□□□ -0.34
Lig3-203ENSMUST00000092849 Rusc2Q80U22 1514 aa12.9□□□□□ -0.34
Lig3-203ENSMUST00000092849 Gm14025A2AP89 1413 aa12.9□□□□□ -0.34
Lig3-203ENSMUST00000092849 Nup160Q9Z0W3 1402 aaKnown RBP12.89□□□□□ -0.35
Lig3-203ENSMUST00000092849 Samd9lQ69Z37 1561 aa12.88□□□□□ -0.35
Lig3-203ENSMUST00000092849 Neurod1Q60867 357 aa12.85□□□□□ -0.35
Lig3-203ENSMUST00000092849 Hdac5Q9Z2V6 1113 aa12.84□□□□□ -0.35
Lig3-203ENSMUST00000092849 Arid3cA6PWV5 409 aa12.82□□□□□ -0.36
Lig3-203ENSMUST00000092849 Ccer2J3QPU5 274 aa12.82□□□□□ -0.36
Lig3-203ENSMUST00000092849 Rtl5Q5DTT4 599 aa12.82□□□□□ -0.36
Lig3-203ENSMUST00000092849 Os9Q8K2C7 672 aa12.81□□□□□ -0.36
Lig3-203ENSMUST00000092849 Clstn2Q9ER65 966 aa12.81□□□□□ -0.36
Lig3-203ENSMUST00000092849 Pla2r1Q62028 1487 aa12.8□□□□□ -0.36
Lig3-203ENSMUST00000092849 Supt5hO55201 1082 aaKnown RBP12.8□□□□□ -0.36
Lig3-203ENSMUST00000092849 Neo1P97798 1493 aa12.78□□□□□ -0.36
Lig3-203ENSMUST00000092849 Igf1rQ60751 1373 aa12.78□□□□□ -0.36
Lig3-203ENSMUST00000092849 Gm13697A2AK42 830 aa12.77□□□□□ -0.37
Lig3-203ENSMUST00000092849 Magi3Q9EQJ9 1476 aa12.77□□□□□ -0.37
Lig3-203ENSMUST00000092849 Hnrnpul2Q00PI9 745 aaKnown RBP12.76□□□□□ -0.37
Lig3-203ENSMUST00000092849 Arhgap31A6X8Z5 1425 aa12.76□□□□□ -0.37
Lig3-203ENSMUST00000092849 Mtus2Q3UHD3 1353 aa12.76□□□□□ -0.37
Lig3-203ENSMUST00000092849 Ccdc141E9Q8Q6 1531 aa12.75□□□□□ -0.37
Lig3-203ENSMUST00000092849 ClspnQ80YR7 1315 aa12.74□□□□□ -0.37
Lig3-203ENSMUST00000092849 Lemd3Q9WU40 921 aa12.73□□□□□ -0.37
Lig3-203ENSMUST00000092849 4930567H17RikQ3V0K5 233 aa12.72□□□□□ -0.37
Lig3-203ENSMUST00000092849 Safb2Q80YR5 991 aaKnown RBP12.72□□□□□ -0.37
Lig3-203ENSMUST00000092849 Cux1P53564 1515 aa12.72□□□□□ -0.37
Lig3-203ENSMUST00000092849 Eif5bQ05D44 1216 aaKnown RBP12.71□□□□□ -0.37
Lig3-203ENSMUST00000092849 4933416C03RikQ3V063 378 aa12.71□□□□□ -0.37
Lig3-203ENSMUST00000092849 Abcc1O35379 1528 aa12.69□□□□□ -0.38
Lig3-203ENSMUST00000092849 Gapvd1Q6PAR5 1458 aa12.69□□□□□ -0.38
Lig3-203ENSMUST00000092849 Zbtb7cQ8VCZ7 619 aa12.69□□□□□ -0.38
Lig3-203ENSMUST00000092849 Fam163aQ8CAA5 168 aa12.69□□□□□ -0.38
Lig3-203ENSMUST00000092849 WizO88286 1684 aaKnown RBP12.68□□□□□ -0.38
Lig3-203ENSMUST00000092849 Ythdc2B2RR83 1445 aaKnown RBP12.67□□□□□ -0.38
Lig3-203ENSMUST00000092849 Chic2Q9D9G3 165 aa12.67□□□□□ -0.38
Lig3-203ENSMUST00000092849 Shroom2A2ALU4 1481 aa12.66□□□□□ -0.38
Lig3-203ENSMUST00000092849 Mia2Q91ZV0 1396 aa12.65□□□□□ -0.38
Lig3-203ENSMUST00000092849 PxdnQ3UQ28 1475 aa12.65□□□□□ -0.38
Lig3-203ENSMUST00000092849 Gm156Q58A37 223 aa12.65□□□□□ -0.38
Lig3-203ENSMUST00000092849 Rsph4aQ8BYM7 716 aa12.64□□□□□ -0.39
Lig3-203ENSMUST00000092849 Ccnb3Q810T2 1396 aa12.64□□□□□ -0.39
Lig3-203ENSMUST00000092849 Rrp7aQ9D1C9 280 aaKnown RBP12.63□□□□□ -0.39
Lig3-203ENSMUST00000092849 Dnajc5P60904 198 aa12.62□□□□□ -0.39
Lig3-203ENSMUST00000092849 Ppargc1bQ8VHJ7 1014 aa12.61□□□□□ -0.39
Lig3-203ENSMUST00000092849 Arhgef5E9Q7D5 1581 aa12.61□□□□□ -0.39
Lig3-203ENSMUST00000092849 Adamts12Q811B3 1600 aa12.6□□□□□ -0.39
Lig3-203ENSMUST00000092849 Magi1Q6RHR9 1471 aa12.6□□□□□ -0.39
Lig3-203ENSMUST00000092849 Plekhh2Q8C115 1491 aa12.6□□□□□ -0.39
Lig3-203ENSMUST00000092849 Ankrd26Q811D2 1581 aa12.6□□□□□ -0.39
Lig3-203ENSMUST00000092849 Arap1Q4LDD4 1452 aa12.6□□□□□ -0.39
Lig3-203ENSMUST00000092849 Naip1Q9QWK5 1403 aa12.59□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms