RNA–Protein interactions for RNA: ENSMUST00000089912.11

Casc4-202, Transcript of Protein CASC4, mousemouse

TSL 1 (best) BASIC

Gene Casc4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-202ENSMUST00000089912 Mrs2Q5NCE8 434 aa18.46■□□□□ 0.54
Casc4-202ENSMUST00000089912 Slc4a3P16283 1227 aa18.45■□□□□ 0.54
Casc4-202ENSMUST00000089912 Znf710Q3U288 666 aa18.45■□□□□ 0.54
Casc4-202ENSMUST00000089912 NrdcQ8BHG1 1161 aa18.44■□□□□ 0.54
Casc4-202ENSMUST00000089912 Top2bQ64511 1612 aa18.41■□□□□ 0.54
Casc4-202ENSMUST00000089912 Top2aQ01320 1528 aaKnown RBP18.37■□□□□ 0.53
Casc4-202ENSMUST00000089912 Cttnbp2B9EJA2 1648 aa18.37■□□□□ 0.53
Casc4-202ENSMUST00000089912 Wdr43Q6ZQL4 677 aaKnown RBP18.36■□□□□ 0.53
Casc4-202ENSMUST00000089912 Wwc2Q6NXJ0 1187 aa18.35■□□□□ 0.53
Casc4-202ENSMUST00000089912 BicraF8VPZ9 1578 aa18.34■□□□□ 0.53
Casc4-202ENSMUST00000089912 Supt16hQ920B9 1047 aa18.34■□□□□ 0.53
Casc4-202ENSMUST00000089912 Zbtb7cQ8VCZ7 619 aa18.34■□□□□ 0.53
Casc4-202ENSMUST00000089912 Arap1Q4LDD4 1452 aa18.33■□□□□ 0.53
Casc4-202ENSMUST00000089912 Rpap1Q80TE0 1409 aa18.33■□□□□ 0.52
Casc4-202ENSMUST00000089912 Baz1bQ9Z277 1479 aa18.32■□□□□ 0.52
Casc4-202ENSMUST00000089912 PtprkP35822 1457 aa18.31■□□□□ 0.52
Casc4-202ENSMUST00000089912 Kif15Q6P9L6 1387 aa18.31■□□□□ 0.52
Casc4-202ENSMUST00000089912 Amer1Q7TS75 1132 aa18.24■□□□□ 0.51
Casc4-202ENSMUST00000089912 Npm1Q61937 292 aaKnown RBP18.24■□□□□ 0.51
Casc4-202ENSMUST00000089912 Arhgap35Q91YM2 1499 aa18.24■□□□□ 0.51
Casc4-202ENSMUST00000089912 Smarca4Q3TKT4 1613 aaKnown RBP18.22■□□□□ 0.51
Casc4-202ENSMUST00000089912 Gm13697A2AK42 830 aa18.21■□□□□ 0.51
Casc4-202ENSMUST00000089912 Rtl5Q5DTT4 599 aa18.19■□□□□ 0.5
Casc4-202ENSMUST00000089912 Pak3Q61036 559 aa18.18■□□□□ 0.5
Casc4-202ENSMUST00000089912 AqrQ8CFQ3 1481 aaKnown RBP18.16■□□□□ 0.5
Casc4-202ENSMUST00000089912 Exoc6Q8R313 802 aa18.15■□□□□ 0.5
Casc4-202ENSMUST00000089912 Ccdc18Q640L5 1455 aa18.14■□□□□ 0.49
Casc4-202ENSMUST00000089912 4933416C03RikQ3V063 378 aa18.12■□□□□ 0.49
Casc4-202ENSMUST00000089912 Rad21Q61550 635 aaKnown RBP18.1■□□□□ 0.49
Casc4-202ENSMUST00000089912 Rgl3Q3UYI5 709 aa18.08■□□□□ 0.48
Casc4-202ENSMUST00000089912 Naip1Q9QWK5 1403 aa18.07■□□□□ 0.48
Casc4-202ENSMUST00000089912 Smg6P61406 1418 aaKnown RBP18.07■□□□□ 0.48
Casc4-202ENSMUST00000089912 Kcnh8P59111 1102 aa18.06■□□□□ 0.48
Casc4-202ENSMUST00000089912 Ccer2J3QPU5 274 aa18.06■□□□□ 0.48
Casc4-202ENSMUST00000089912 Arhgef5E9Q7D5 1581 aa18.05■□□□□ 0.48
Casc4-202ENSMUST00000089912 Ofd1Q80Z25 1017 aa18.04■□□□□ 0.48
Casc4-202ENSMUST00000089912 DaxxO35613 739 aa18.03■□□□□ 0.48
Casc4-202ENSMUST00000089912 Iqgap2Q3UQ44 1575 aa18.03■□□□□ 0.48
Casc4-202ENSMUST00000089912 Aebp1Q640N1 1128 aa18.01■□□□□ 0.47
Casc4-202ENSMUST00000089912 Grwd1Q810D6 446 aaKnown RBP18.01■□□□□ 0.47
Casc4-202ENSMUST00000089912 ArxO35085 564 aa18■□□□□ 0.47
Casc4-202ENSMUST00000089912 Ubl4bQ9CQ84 188 aa18■□□□□ 0.47
Casc4-202ENSMUST00000089912 Prdm10Q3UTQ7 1184 aa17.99■□□□□ 0.47
Casc4-202ENSMUST00000089912 Slc4a2P13808 1237 aaKnown RBP17.98■□□□□ 0.47
Casc4-202ENSMUST00000089912 Zfp644E9QA22 1323 aa17.97■□□□□ 0.47
Casc4-202ENSMUST00000089912 Fkbp15Q6P9Q6 1216 aaKnown RBP17.95■□□□□ 0.46
Casc4-202ENSMUST00000089912 Mphosph9A6H5Y1 991 aa17.95■□□□□ 0.46
Casc4-202ENSMUST00000089912 NeflP08551 543 aa17.93■□□□□ 0.46
Casc4-202ENSMUST00000089912 Cabp1Q9JLK7 227 aa17.93■□□□□ 0.46
Casc4-202ENSMUST00000089912 Pkd2O35245 966 aa17.93■□□□□ 0.46
Casc4-202ENSMUST00000089912 Hdac5Q9Z2V6 1113 aa17.92■□□□□ 0.46
Casc4-202ENSMUST00000089912 Dhx29Q6PGC1 1365 aaKnown RBP17.92■□□□□ 0.46
Casc4-202ENSMUST00000089912 Mia2Q91ZV0 1396 aa17.92■□□□□ 0.46
Casc4-202ENSMUST00000089912 Tiam1Q60610 1591 aa17.91■□□□□ 0.46
Casc4-202ENSMUST00000089912 ChgaP26339 463 aaKnown RBP17.89■□□□□ 0.45
Casc4-202ENSMUST00000089912 3425401B19RikD3Z1D3 1412 aa17.88■□□□□ 0.45
Casc4-202ENSMUST00000089912 Fyco1Q8VDC1 1437 aa17.88■□□□□ 0.45
Casc4-202ENSMUST00000089912 Shroom4Q1W617 1475 aa17.88■□□□□ 0.45
Casc4-202ENSMUST00000089912 Kdm5bQ80Y84 1544 aa17.88■□□□□ 0.45
Casc4-202ENSMUST00000089912 B4galnt3Q6L8S8 986 aa17.86■□□□□ 0.45
Casc4-202ENSMUST00000089912 Dbr1Q923B1 550 aa17.86■□□□□ 0.45
Casc4-202ENSMUST00000089912 Slx4Q6P1D7 1565 aa17.85■□□□□ 0.45
Casc4-202ENSMUST00000089912 Apbb1Q9QXJ1 710 aa17.85■□□□□ 0.45
Casc4-202ENSMUST00000089912 Ccnb3Q810T2 1396 aa17.84■□□□□ 0.45
Casc4-202ENSMUST00000089912 Arhgap27A2AB59 869 aa17.84■□□□□ 0.45
Casc4-202ENSMUST00000089912 Ccdc27Q3V036 639 aa17.84■□□□□ 0.45
Casc4-202ENSMUST00000089912 CntlnA2AM05 1397 aa17.84■□□□□ 0.45
Casc4-202ENSMUST00000089912 Upf2A2AT37 1269 aaKnown RBP17.82■□□□□ 0.44
Casc4-202ENSMUST00000089912 NrkQ9R0G8 1455 aa17.82■□□□□ 0.44
Casc4-202ENSMUST00000089912 Washc2Q6PGL7 1334 aa17.81■□□□□ 0.44
Casc4-202ENSMUST00000089912 Liat1Q810M6 228 aa17.8■□□□□ 0.44
Casc4-202ENSMUST00000089912 Pcf11G3X9Z4 1553 aa17.8■□□□□ 0.44
Casc4-202ENSMUST00000089912 Atad2bE9Q166 1460 aaKnown RBP17.8■□□□□ 0.44
Casc4-202ENSMUST00000089912 Rundc1Q0VDN7 615 aa17.79■□□□□ 0.44
Casc4-202ENSMUST00000089912 Usp47Q8BY87 1376 aa17.78■□□□□ 0.44
Casc4-202ENSMUST00000089912 TchhA0A0B4J1F9 1599 aa17.78■□□□□ 0.44
Casc4-202ENSMUST00000089912 UacaQ8CGB3 1411 aa17.78■□□□□ 0.44
Casc4-202ENSMUST00000089912 Fhad1A6PWD2 1420 aa17.78■□□□□ 0.44
Casc4-202ENSMUST00000089912 Card11Q8CIS0 1159 aa17.77■□□□□ 0.44
Casc4-202ENSMUST00000089912 Gm13695A2AK44 830 aa17.76■□□□□ 0.43
Casc4-202ENSMUST00000089912 Eif4g1Q6NZJ6 1600 aaKnown RBP17.76■□□□□ 0.43
Casc4-202ENSMUST00000089912 Anp32bQ9EST5 272 aaKnown RBP17.76■□□□□ 0.43
Casc4-202ENSMUST00000089912 Mroh2bQ7M6Y6 1581 aa17.74■□□□□ 0.43
Casc4-202ENSMUST00000089912 Hsp90aa1P07901 733 aaKnown RBP17.74■□□□□ 0.43
Casc4-202ENSMUST00000089912 Cux2P70298 1426 aa17.73■□□□□ 0.43
Casc4-202ENSMUST00000089912 Trak1Q6PD31 939 aa17.72■□□□□ 0.43
Casc4-202ENSMUST00000089912 Carmil1Q6EDY6 1374 aa17.72■□□□□ 0.43
Casc4-202ENSMUST00000089912 Cux1P53564 1515 aa17.71■□□□□ 0.43
Casc4-202ENSMUST00000089912 CanxP35564 591 aaKnown RBP17.71■□□□□ 0.43
Casc4-202ENSMUST00000089912 L3mbtl2P59178 703 aa17.71■□□□□ 0.42
Casc4-202ENSMUST00000089912 Ankrd36D3Z4K0 1415 aa17.71■□□□□ 0.42
Casc4-202ENSMUST00000089912 Ankrd26Q811D2 1581 aa17.7■□□□□ 0.42
Casc4-202ENSMUST00000089912 Rangap1P46061 589 aaKnown RBP17.7■□□□□ 0.42
Casc4-202ENSMUST00000089912 Vps8Q0P5W1 1427 aa17.7■□□□□ 0.42
Casc4-202ENSMUST00000089912 Erich6D3Z6S9 713 aa17.7■□□□□ 0.42
Casc4-202ENSMUST00000089912 Kif27Q7M6Z4 1394 aa17.69■□□□□ 0.42
Casc4-202ENSMUST00000089912 Tcerg1Q8CGF7 1100 aaKnown RBP17.69■□□□□ 0.42
Casc4-202ENSMUST00000089912 Os9Q8K2C7 672 aa17.69■□□□□ 0.42
Casc4-202ENSMUST00000089912 Plcd4Q8K3R3 807 aa17.69■□□□□ 0.42
Casc4-202ENSMUST00000089912 Pds5bQ4VA53 1446 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms