RNA–Protein interactions for RNA: ENSMUST00000079205.13

Chpf-201, Transcript of Chondroitin sulfate synthase 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chpf, Length 2,892 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chpf-201ENSMUST00000079205 Map3k1P53349 1493 aa22.36■■□□□ 1.17
Chpf-201ENSMUST00000079205 Baz1bQ9Z277 1479 aa22.35■■□□□ 1.17
Chpf-201ENSMUST00000079205 Lamc3Q9R0B6 1581 aa22.35■■□□□ 1.17
Chpf-201ENSMUST00000079205 TchhA0A0B4J1F9 1599 aa22.34■■□□□ 1.17
Chpf-201ENSMUST00000079205 Frmpd1A2AKB4 1549 aa22.34■■□□□ 1.17
Chpf-201ENSMUST00000079205 Pds5bQ4VA53 1446 aaKnown RBP22.33■■□□□ 1.17
Chpf-201ENSMUST00000079205 Naip1Q9QWK5 1403 aa22.3■■□□□ 1.16
Chpf-201ENSMUST00000079205 AqrQ8CFQ3 1481 aaKnown RBP22.3■■□□□ 1.16
Chpf-201ENSMUST00000079205 Kif15Q6P9L6 1387 aa22.29■■□□□ 1.16
Chpf-201ENSMUST00000079205 Camsap1A2AHC3 1581 aa22.29■■□□□ 1.16
Chpf-201ENSMUST00000079205 Wdr62Q3U3T8 1523 aa22.28■■□□□ 1.16
Chpf-201ENSMUST00000079205 BlmO88700 1416 aa22.26■■□□□ 1.15
Chpf-201ENSMUST00000079205 Nolc1E9Q5C9 702 aaKnown RBP22.25■■□□□ 1.15
Chpf-201ENSMUST00000079205 Rpap1Q80TE0 1409 aa22.22■■□□□ 1.15
Chpf-201ENSMUST00000079205 Ankrd26Q811D2 1581 aa22.21■■□□□ 1.15
Chpf-201ENSMUST00000079205 Znf710Q3U288 666 aa22.21■■□□□ 1.15
Chpf-201ENSMUST00000079205 Mroh2bQ7M6Y6 1581 aa22.2■■□□□ 1.15
Chpf-201ENSMUST00000079205 Erich3F6QRE9 1637 aa22.2■■□□□ 1.14
Chpf-201ENSMUST00000079205 Slx4Q6P1D7 1565 aa22.18■■□□□ 1.14
Chpf-201ENSMUST00000079205 Fam50aQ9WV03 339 aaKnown RBP22.17■■□□□ 1.14
Chpf-201ENSMUST00000079205 Grin2bQ01097 1482 aa22.17■■□□□ 1.14
Chpf-201ENSMUST00000079205 Pcf11G3X9Z4 1553 aa22.17■■□□□ 1.14
Chpf-201ENSMUST00000079205 NclP09405 707 aaKnown RBP22.13■■□□□ 1.13
Chpf-201ENSMUST00000079205 Calr4Q3TQS0 420 aa22.12■■□□□ 1.13
Chpf-201ENSMUST00000079205 Lmod2Q3UHZ5 550 aa22.09■■□□□ 1.13
Chpf-201ENSMUST00000079205 Rtl5Q5DTT4 599 aa22.09■■□□□ 1.13
Chpf-201ENSMUST00000079205 Ttbk1Q6PCN3 1308 aa22.08■■□□□ 1.13
Chpf-201ENSMUST00000079205 3425401B19RikD3Z1D3 1412 aa22.08■■□□□ 1.12
Chpf-201ENSMUST00000079205 Unc13aQ4KUS2 1712 aa22.08■■□□□ 1.12
Chpf-201ENSMUST00000079205 UacaQ8CGB3 1411 aa22.06■■□□□ 1.12
Chpf-201ENSMUST00000079205 Stra8P70278 393 aa22.05■■□□□ 1.12
Chpf-201ENSMUST00000079205 Pelp1Q9DBD5 1123 aaKnown RBP22.05■■□□□ 1.12
Chpf-201ENSMUST00000079205 Lmo7E9PYF4 1699 aaKnown RBP22.04■■□□□ 1.12
Chpf-201ENSMUST00000079205 Supt16hQ920B9 1047 aa22.04■■□□□ 1.12
Chpf-201ENSMUST00000079205 Hspa5P20029 655 aaKnown RBP22.03■■□□□ 1.12
Chpf-201ENSMUST00000079205 Slc24a1Q91WD8 1130 aa22.02■■□□□ 1.12
Chpf-201ENSMUST00000079205 CntlnA2AM05 1397 aa22■■□□□ 1.11
Chpf-201ENSMUST00000079205 Cux1P53564 1515 aa21.99■■□□□ 1.11
Chpf-201ENSMUST00000079205 Ercc6F8VPZ5 1481 aa21.98■■□□□ 1.11
Chpf-201ENSMUST00000079205 Fhad1A6PWD2 1420 aa21.97■■□□□ 1.11
Chpf-201ENSMUST00000079205 Ankrd36D3Z4K0 1415 aa21.97■■□□□ 1.11
Chpf-201ENSMUST00000079205 Gm13697A2AK42 830 aa21.96■■□□□ 1.11
Chpf-201ENSMUST00000079205 Dhx29Q6PGC1 1365 aaKnown RBP21.96■■□□□ 1.11
Chpf-201ENSMUST00000079205 Ubl4bQ9CQ84 188 aa21.94■■□□□ 1.1
Chpf-201ENSMUST00000079205 Carmil1Q6EDY6 1374 aa21.93■■□□□ 1.1
Chpf-201ENSMUST00000079205 Fyco1Q8VDC1 1437 aa21.93■■□□□ 1.1
Chpf-201ENSMUST00000079205 Mia2Q91ZV0 1396 aa21.92■■□□□ 1.1
Chpf-201ENSMUST00000079205 Ccer2J3QPU5 274 aa21.91■■□□□ 1.1
Chpf-201ENSMUST00000079205 Ppp4r2Q0VGB7 417 aa21.91■■□□□ 1.1
Chpf-201ENSMUST00000079205 Vps8Q0P5W1 1427 aa21.9■■□□□ 1.1
Chpf-201ENSMUST00000079205 Amer1Q7TS75 1132 aa21.88■■□□□ 1.09
Chpf-201ENSMUST00000079205 Peg3Q3URU2 1571 aa21.86■■□□□ 1.09
Chpf-201ENSMUST00000079205 Hdac5Q9Z2V6 1113 aa21.86■■□□□ 1.09
Chpf-201ENSMUST00000079205 Urb2E9Q7L1 1524 aaKnown RBP21.86■■□□□ 1.09
Chpf-201ENSMUST00000079205 Naip2Q9QUK4 1447 aa21.86■■□□□ 1.09
Chpf-201ENSMUST00000079205 Dnajc5bQ9CQ94 199 aa21.85■■□□□ 1.09
Chpf-201ENSMUST00000079205 Efcab5A0JP43 1406 aa21.84■■□□□ 1.09
Chpf-201ENSMUST00000079205 Gm7298A0A0N4SVU1 1476 aa21.82■■□□□ 1.08
Chpf-201ENSMUST00000079205 Eif5bQ05D44 1216 aaKnown RBP21.82■■□□□ 1.08
Chpf-201ENSMUST00000079205 Gm1043A0A140LJC2 1431 aa21.81■■□□□ 1.08
Chpf-201ENSMUST00000079205 Cux2P70298 1426 aa21.81■■□□□ 1.08
Chpf-201ENSMUST00000079205 Sin3aQ60520 1274 aaKnown RBP21.81■■□□□ 1.08
Chpf-201ENSMUST00000079205 Crocc2F6XLV1 1638 aa21.8■■□□□ 1.08
Chpf-201ENSMUST00000079205 Aebp1Q640N1 1128 aa21.8■■□□□ 1.08
Chpf-201ENSMUST00000079205 Wdr43Q6ZQL4 677 aaKnown RBP21.78■■□□□ 1.08
Chpf-201ENSMUST00000079205 Camsap2Q8C1B1 1461 aa21.77■■□□□ 1.08
Chpf-201ENSMUST00000079205 Smg6P61406 1418 aaKnown RBP21.76■■□□□ 1.07
Chpf-201ENSMUST00000079205 Npm1Q61937 292 aaKnown RBP21.75■■□□□ 1.07
Chpf-201ENSMUST00000079205 Naip5Q9R016 1403 aa21.75■■□□□ 1.07
Chpf-201ENSMUST00000079205 A2mQ6GQT1 1474 aa21.75■■□□□ 1.07
Chpf-201ENSMUST00000079205 Pak3Q61036 559 aa21.75■■□□□ 1.07
Chpf-201ENSMUST00000079205 Duox2A2AQ99 1517 aa21.74■■□□□ 1.07
Chpf-201ENSMUST00000079205 LrpprcQ6PB66 1392 aaKnown RBP21.74■■□□□ 1.07
Chpf-201ENSMUST00000079205 Dennd4bQ3U1Y4 1499 aa21.73■■□□□ 1.07
Chpf-201ENSMUST00000079205 Ncoa2Q61026 1462 aa21.73■■□□□ 1.07
Chpf-201ENSMUST00000079205 PogzQ8BZH4 1409 aaKnown RBP21.72■■□□□ 1.07
Chpf-201ENSMUST00000079205 Ube2uB1AUC4 352 aa21.7■■□□□ 1.06
Chpf-201ENSMUST00000079205 Chic2Q9D9G3 165 aa21.69■■□□□ 1.06
Chpf-201ENSMUST00000079205 Phldb1Q6PDH0 1371 aaKnown RBP21.68■■□□□ 1.06
Chpf-201ENSMUST00000079205 SynmQ70IV5 1561 aa21.66■■□□□ 1.06
Chpf-201ENSMUST00000079205 Ccnb3Q810T2 1396 aa21.64■■□□□ 1.05
Chpf-201ENSMUST00000079205 Cul7Q8VE73 1689 aa21.64■■□□□ 1.05
Chpf-201ENSMUST00000079205 P3h3Q8CG70 732 aa21.62■■□□□ 1.05
Chpf-201ENSMUST00000079205 Samd9lQ69Z37 1561 aa21.62■■□□□ 1.05
Chpf-201ENSMUST00000079205 Upf2A2AT37 1269 aaKnown RBP21.62■■□□□ 1.05
Chpf-201ENSMUST00000079205 Washc2Q6PGL7 1334 aa21.61■■□□□ 1.05
Chpf-201ENSMUST00000079205 Polr1aO35134 1717 aaKnown RBP21.59■■□□□ 1.05
Chpf-201ENSMUST00000079205 Rad54l2Q99NG0 1466 aa21.57■■□□□ 1.04
Chpf-201ENSMUST00000079205 Lmtk2Q3TYD6 1471 aa21.56■■□□□ 1.04
Chpf-201ENSMUST00000079205 Liat1Q810M6 228 aa21.56■■□□□ 1.04
Chpf-201ENSMUST00000079205 Fhod3Q76LL6 1578 aa21.55■■□□□ 1.04
Chpf-201ENSMUST00000079205 Ccdc27Q3V036 639 aa21.54■■□□□ 1.04
Chpf-201ENSMUST00000079205 Slc4a3P16283 1227 aa21.54■■□□□ 1.04
Chpf-201ENSMUST00000079205 Pprc1Q6NZN1 1644 aa21.53■■□□□ 1.04
Chpf-201ENSMUST00000079205 Mphosph9A6H5Y1 991 aa21.52■■□□□ 1.04
Chpf-201ENSMUST00000079205 Thoc2B1AZI6 1594 aaKnown RBP21.51■■□□□ 1.03
Chpf-201ENSMUST00000079205 Gtf3c3Q3TMP1 882 aa21.49■■□□□ 1.03
Chpf-201ENSMUST00000079205 Egfem1Q8C088 590 aa21.49■■□□□ 1.03
Chpf-201ENSMUST00000079205 Gpatch8A2A6A1 1505 aa21.46■■□□□ 1.03
Chpf-201ENSMUST00000079205 Mrs2Q5NCE8 434 aa21.46■■□□□ 1.03
Retrieved 100 of 22,080 RNA–protein pairs in 80 ms