RNA–Protein interactions for RNA: ENSMUST00000073691.3

Lima1-201, Transcript of LIM domain and actin-binding protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lima1, Length 4,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1-201ENSMUST00000073691 4933416C03RikQ3V063 378 aa15.06■□□□□ 0
Lima1-201ENSMUST00000073691 Ppp4r2Q0VGB7 417 aa15.05■□□□□ 0
Lima1-201ENSMUST00000073691 Fmn1Q05860 1466 aa15.05■□□□□ 0
Lima1-201ENSMUST00000073691 Hspa5P20029 655 aaKnown RBP15.04■□□□□ -0
Lima1-201ENSMUST00000073691 Rapgef2Q8CHG7 1496 aa15.03■□□□□ -0
Lima1-201ENSMUST00000073691 Erich6D3Z6S9 713 aa15.03■□□□□ -0
Lima1-201ENSMUST00000073691 P3h3Q8CG70 732 aa15.01□□□□□ -0.01
Lima1-201ENSMUST00000073691 Fam71e1A1L3C1 212 aa15□□□□□ -0.01
Lima1-201ENSMUST00000073691 Rgl3Q3UYI5 709 aa14.96□□□□□ -0.01
Lima1-201ENSMUST00000073691 Ccdc18Q640L5 1455 aa14.94□□□□□ -0.02
Lima1-201ENSMUST00000073691 Rtl5Q5DTT4 599 aa14.93□□□□□ -0.02
Lima1-201ENSMUST00000073691 Rad21Q61550 635 aaKnown RBP14.92□□□□□ -0.02
Lima1-201ENSMUST00000073691 Sin3aQ60520 1274 aaKnown RBP14.92□□□□□ -0.02
Lima1-201ENSMUST00000073691 Wdr43Q6ZQL4 677 aaKnown RBP14.92□□□□□ -0.02
Lima1-201ENSMUST00000073691 Grwd1Q810D6 446 aaKnown RBP14.87□□□□□ -0.03
Lima1-201ENSMUST00000073691 Ercc6F8VPZ5 1481 aa14.86□□□□□ -0.03
Lima1-201ENSMUST00000073691 DiexfQ8BTT6 772 aaKnown RBP14.84□□□□□ -0.03
Lima1-201ENSMUST00000073691 DaxxO35613 739 aa14.83□□□□□ -0.04
Lima1-201ENSMUST00000073691 Wwc2Q6NXJ0 1187 aa14.83□□□□□ -0.04
Lima1-201ENSMUST00000073691 Nlrp6Q91WS2 869 aa14.82□□□□□ -0.04
Lima1-201ENSMUST00000073691 Polr3glQ8R0C0 218 aa14.81□□□□□ -0.04
Lima1-201ENSMUST00000073691 ArxO35085 564 aa14.81□□□□□ -0.04
Lima1-201ENSMUST00000073691 Aebp1Q640N1 1128 aa14.81□□□□□ -0.04
Lima1-201ENSMUST00000073691 Gm13697A2AK42 830 aa14.8□□□□□ -0.04
Lima1-201ENSMUST00000073691 Pds5bQ4VA53 1446 aaKnown RBP14.79□□□□□ -0.04
Lima1-201ENSMUST00000073691 Arhgap27A2AB59 869 aa14.78□□□□□ -0.04
Lima1-201ENSMUST00000073691 Ofd1Q80Z25 1017 aa14.77□□□□□ -0.04
Lima1-201ENSMUST00000073691 Mia2Q91ZV0 1396 aa14.77□□□□□ -0.05
Lima1-201ENSMUST00000073691 Baz1bQ9Z277 1479 aa14.76□□□□□ -0.05
Lima1-201ENSMUST00000073691 Smarca4Q3TKT4 1613 aaKnown RBP14.75□□□□□ -0.05
Lima1-201ENSMUST00000073691 Atp1b4Q99ME6 356 aa14.74□□□□□ -0.05
Lima1-201ENSMUST00000073691 Cttnbp2B9EJA2 1648 aa14.74□□□□□ -0.05
Lima1-201ENSMUST00000073691 Rangap1P46061 589 aaKnown RBP14.73□□□□□ -0.05
Lima1-201ENSMUST00000073691 Card11Q8CIS0 1159 aa14.71□□□□□ -0.05
Lima1-201ENSMUST00000073691 Pkd2O35245 966 aa14.71□□□□□ -0.05
Lima1-201ENSMUST00000073691 Slc4a3P16283 1227 aa14.71□□□□□ -0.05
Lima1-201ENSMUST00000073691 Cabp1Q9JLK7 227 aa14.7□□□□□ -0.06
Lima1-201ENSMUST00000073691 Cc2d2aQ8CFW7 1633 aa14.69□□□□□ -0.06
Lima1-201ENSMUST00000073691 Kif27Q7M6Z4 1394 aa14.68□□□□□ -0.06
Lima1-201ENSMUST00000073691 Cux2P70298 1426 aa14.67□□□□□ -0.06
Lima1-201ENSMUST00000073691 Mtus2Q3UHD3 1353 aa14.67□□□□□ -0.06
Lima1-201ENSMUST00000073691 Fyco1Q8VDC1 1437 aa14.66□□□□□ -0.06
Lima1-201ENSMUST00000073691 Kdm2aP59997 1161 aa14.66□□□□□ -0.06
Lima1-201ENSMUST00000073691 Atad2bE9Q166 1460 aaKnown RBP14.66□□□□□ -0.06
Lima1-201ENSMUST00000073691 Mphosph9A6H5Y1 991 aa14.66□□□□□ -0.06
Lima1-201ENSMUST00000073691 Exoc6Q8R313 802 aa14.65□□□□□ -0.06
Lima1-201ENSMUST00000073691 CntlnA2AM05 1397 aa14.64□□□□□ -0.07
Lima1-201ENSMUST00000073691 Arhgap35Q91YM2 1499 aa14.64□□□□□ -0.07
Lima1-201ENSMUST00000073691 Clstn2Q9ER65 966 aa14.64□□□□□ -0.07
Lima1-201ENSMUST00000073691 Rrp7aQ9D1C9 280 aaKnown RBP14.62□□□□□ -0.07
Lima1-201ENSMUST00000073691 Apbb1Q9QXJ1 710 aa14.61□□□□□ -0.07
Lima1-201ENSMUST00000073691 Upf2A2AT37 1269 aaKnown RBP14.6□□□□□ -0.07
Lima1-201ENSMUST00000073691 Rpap1Q80TE0 1409 aa14.59□□□□□ -0.07
Lima1-201ENSMUST00000073691 Rundc1Q0VDN7 615 aa14.59□□□□□ -0.07
Lima1-201ENSMUST00000073691 Trak1Q6PD31 939 aa14.59□□□□□ -0.07
Lima1-201ENSMUST00000073691 Cwc22Q8C5N3 908 aaKnown RBP14.59□□□□□ -0.07
Lima1-201ENSMUST00000073691 Iqgap2Q3UQ44 1575 aa14.58□□□□□ -0.08
Lima1-201ENSMUST00000073691 Top2aQ01320 1528 aaKnown RBP14.58□□□□□ -0.08
Lima1-201ENSMUST00000073691 Carmil1Q6EDY6 1374 aa14.57□□□□□ -0.08
Lima1-201ENSMUST00000073691 Trim26Q99PN3 545 aa14.57□□□□□ -0.08
Lima1-201ENSMUST00000073691 Mroh3A0A1D5RM54 893 aa14.56□□□□□ -0.08
Lima1-201ENSMUST00000073691 Ccnb3Q810T2 1396 aa14.55□□□□□ -0.08
Lima1-201ENSMUST00000073691 Map4P27546 1125 aaKnown RBP14.53□□□□□ -0.08
Lima1-201ENSMUST00000073691 Neurod2Q62414 383 aa14.53□□□□□ -0.08
Lima1-201ENSMUST00000073691 Nolc1E9Q5C9 702 aaKnown RBP14.52□□□□□ -0.08
Lima1-201ENSMUST00000073691 Supt16hQ920B9 1047 aa14.52□□□□□ -0.09
Lima1-201ENSMUST00000073691 Hdac5Q9Z2V6 1113 aa14.52□□□□□ -0.09
Lima1-201ENSMUST00000073691 LrpprcQ6PB66 1392 aaKnown RBP14.51□□□□□ -0.09
Lima1-201ENSMUST00000073691 Arap1Q4LDD4 1452 aa14.51□□□□□ -0.09
Lima1-201ENSMUST00000073691 PtprkP35822 1457 aa14.5□□□□□ -0.09
Lima1-201ENSMUST00000073691 BicraF8VPZ9 1578 aa14.5□□□□□ -0.09
Lima1-201ENSMUST00000073691 CanxP35564 591 aaKnown RBP14.5□□□□□ -0.09
Lima1-201ENSMUST00000073691 Dbr1Q923B1 550 aa14.5□□□□□ -0.09
Lima1-201ENSMUST00000073691 Ncapd3Q6ZQK0 1506 aa14.49□□□□□ -0.09
Lima1-201ENSMUST00000073691 Plppr3Q7TPB0 716 aa14.49□□□□□ -0.09
Lima1-201ENSMUST00000073691 B4galnt3Q6L8S8 986 aa14.48□□□□□ -0.09
Lima1-201ENSMUST00000073691 Trim30dE9PWL0 497 aa14.47□□□□□ -0.09
Lima1-201ENSMUST00000073691 Phldb1Q6PDH0 1371 aaKnown RBP14.47□□□□□ -0.09
Lima1-201ENSMUST00000073691 Smg6P61406 1418 aaKnown RBP14.46□□□□□ -0.09
Lima1-201ENSMUST00000073691 Gm13695A2AK44 830 aa14.45□□□□□ -0.1
Lima1-201ENSMUST00000073691 Naip1Q9QWK5 1403 aa14.45□□□□□ -0.1
Lima1-201ENSMUST00000073691 Gm20521D3Z5F7 333 aa14.44□□□□□ -0.1
Lima1-201ENSMUST00000073691 Stk24Q99KH8 431 aa14.44□□□□□ -0.1
Lima1-201ENSMUST00000073691 Shroom4Q1W617 1475 aa14.44□□□□□ -0.1
Lima1-201ENSMUST00000073691 Znf710Q3U288 666 aa14.44□□□□□ -0.1
Lima1-201ENSMUST00000073691 Usp47Q8BY87 1376 aa14.44□□□□□ -0.1
Lima1-201ENSMUST00000073691 Ifit1bl1D3Z6F0 470 aa14.43□□□□□ -0.1
Lima1-201ENSMUST00000073691 Cnga1P29974 684 aa14.42□□□□□ -0.1
Lima1-201ENSMUST00000073691 Dhx29Q6PGC1 1365 aaKnown RBP14.42□□□□□ -0.1
Lima1-201ENSMUST00000073691 Top2bQ64511 1612 aa14.42□□□□□ -0.1
Lima1-201ENSMUST00000073691 Zfp644E9QA22 1323 aa14.41□□□□□ -0.1
Lima1-201ENSMUST00000073691 Srpk2O54781 681 aaKnown RBP14.4□□□□□ -0.1
Lima1-201ENSMUST00000073691 Hsp90aa1P07901 733 aaKnown RBP14.4□□□□□ -0.1
Lima1-201ENSMUST00000073691 Bcl11aQ9QYE3 773 aa14.38□□□□□ -0.11
Lima1-201ENSMUST00000073691 Ecm2Q5FW85 670 aa14.38□□□□□ -0.11
Lima1-201ENSMUST00000073691 Zscan21Q07231 555 aa14.37□□□□□ -0.11
Lima1-201ENSMUST00000073691 Armcx1Q9CX83 456 aa14.37□□□□□ -0.11
Lima1-201ENSMUST00000073691 Tcerg1Q8CGF7 1100 aaKnown RBP14.36□□□□□ -0.11
Lima1-201ENSMUST00000073691 Hsp90ab1P11499 724 aaKnown RBP14.36□□□□□ -0.11
Lima1-201ENSMUST00000073691 Ccdc27Q3V036 639 aa14.36□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 8.6 ms