RNA–Protein interactions for RNA: ENSMUST00000063006.11

Ccdc42-201, Transcript of Coiled-coil domain-containing protein 42, mousemouse

TSL 5 BASIC

Gene Ccdc42, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc42-201ENSMUST00000063006 Gm156Q58A37 223 aa14.66□□□□□ -0.06
Ccdc42-201ENSMUST00000063006 Rad54l2Q99NG0 1466 aa14.65□□□□□ -0.06
Ccdc42-201ENSMUST00000063006 Gapvd1Q6PAR5 1458 aa14.64□□□□□ -0.07
Ccdc42-201ENSMUST00000063006 PtprtQ99M80 1454 aa14.64□□□□□ -0.07
Ccdc42-201ENSMUST00000063006 Ttbk1Q6PCN3 1308 aa14.63□□□□□ -0.07
Ccdc42-201ENSMUST00000063006 Magi3Q9EQJ9 1476 aa14.61□□□□□ -0.07
Ccdc42-201ENSMUST00000063006 AqrQ8CFQ3 1481 aaKnown RBP14.6□□□□□ -0.07
Ccdc42-201ENSMUST00000063006 Grin2aP35436 1464 aa14.59□□□□□ -0.07
Ccdc42-201ENSMUST00000063006 Rapgef2Q8CHG7 1496 aa14.59□□□□□ -0.07
Ccdc42-201ENSMUST00000063006 Fgd6Q69ZL1 1399 aa14.59□□□□□ -0.07
Ccdc42-201ENSMUST00000063006 Pprc1Q6NZN1 1644 aa14.59□□□□□ -0.07
Ccdc42-201ENSMUST00000063006 Efcab5A0JP43 1406 aa14.56□□□□□ -0.08
Ccdc42-201ENSMUST00000063006 Chd1P40201 1711 aa14.55□□□□□ -0.08
Ccdc42-201ENSMUST00000063006 Abcc1O35379 1528 aa14.53□□□□□ -0.08
Ccdc42-201ENSMUST00000063006 AknaQ80VW7 1404 aa14.51□□□□□ -0.09
Ccdc42-201ENSMUST00000063006 NrkQ9R0G8 1455 aa14.5□□□□□ -0.09
Ccdc42-201ENSMUST00000063006 Ythdc2B2RR83 1445 aaKnown RBP14.5□□□□□ -0.09
Ccdc42-201ENSMUST00000063006 Pla2r1Q62028 1487 aa14.48□□□□□ -0.09
Ccdc42-201ENSMUST00000063006 Znf219Q6IQX8 726 aa14.47□□□□□ -0.09
Ccdc42-201ENSMUST00000063006 Cep162Q6ZQ06 1403 aa14.46□□□□□ -0.09
Ccdc42-201ENSMUST00000063006 Gpatch8A2A6A1 1505 aa14.46□□□□□ -0.1
Ccdc42-201ENSMUST00000063006 Dnmt1P13864 1620 aaKnown RBP14.43□□□□□ -0.1
Ccdc42-201ENSMUST00000063006 Setbp1Q9Z180 1582 aa14.43□□□□□ -0.1
Ccdc42-201ENSMUST00000063006 Acin1Q9JIX8 1338 aaKnown RBP14.41□□□□□ -0.1
Ccdc42-201ENSMUST00000063006 Ak9G3UYQ4 1894 aa14.4□□□□□ -0.1
Ccdc42-201ENSMUST00000063006 BC005561E9Q5E2 1589 aa14.4□□□□□ -0.1
Ccdc42-201ENSMUST00000063006 Npm2Q80W85 207 aa14.4□□□□□ -0.1
Ccdc42-201ENSMUST00000063006 Abcc2Q8VI47 1543 aa14.4□□□□□ -0.1
Ccdc42-201ENSMUST00000063006 Shroom4Q1W617 1475 aa14.39□□□□□ -0.11
Ccdc42-201ENSMUST00000063006 CadpsQ80TJ1 1355 aa14.39□□□□□ -0.11
Ccdc42-201ENSMUST00000063006 Abca16E9PWJ7 1678 aa14.39□□□□□ -0.11
Ccdc42-201ENSMUST00000063006 SynmQ70IV5 1561 aa14.39□□□□□ -0.11
Ccdc42-201ENSMUST00000063006 Map3k1P53349 1493 aa14.37□□□□□ -0.11
Ccdc42-201ENSMUST00000063006 Neo1P97798 1493 aa14.36□□□□□ -0.11
Ccdc42-201ENSMUST00000063006 Soga1E1U8D0 1418 aa14.35□□□□□ -0.11
Ccdc42-201ENSMUST00000063006 Eif4g1Q6NZJ6 1600 aaKnown RBP14.35□□□□□ -0.11
Ccdc42-201ENSMUST00000063006 WizO88286 1684 aaKnown RBP14.34□□□□□ -0.11
Ccdc42-201ENSMUST00000063006 PxdnQ3UQ28 1475 aa14.33□□□□□ -0.12
Ccdc42-201ENSMUST00000063006 Map3k4O08648 1597 aa14.32□□□□□ -0.12
Ccdc42-201ENSMUST00000063006 Ppp1r18Q8BQ30 594 aa14.32□□□□□ -0.12
Ccdc42-201ENSMUST00000063006 Arhgap27A2AB59 869 aa14.31□□□□□ -0.12
Ccdc42-201ENSMUST00000063006 AI481877A2ALV5 1481 aa14.28□□□□□ -0.12
Ccdc42-201ENSMUST00000063006 Arhgap35Q91YM2 1499 aa14.28□□□□□ -0.12
Ccdc42-201ENSMUST00000063006 TchhA0A0B4J1F9 1599 aa14.27□□□□□ -0.12
Ccdc42-201ENSMUST00000063006 Gm14025A2AP89 1413 aa14.27□□□□□ -0.12
Ccdc42-201ENSMUST00000063006 Adamts12Q811B3 1600 aa14.26□□□□□ -0.13
Ccdc42-201ENSMUST00000063006 Mroh2bQ7M6Y6 1581 aa14.26□□□□□ -0.13
Ccdc42-201ENSMUST00000063006 Arhgef12Q8R4H2 1543 aaKnown RBP14.25□□□□□ -0.13
Ccdc42-201ENSMUST00000063006 ArsiQ32KI9 573 aa14.24□□□□□ -0.13
Ccdc42-201ENSMUST00000063006 Slx4Q6P1D7 1565 aa14.23□□□□□ -0.13
Ccdc42-201ENSMUST00000063006 Ifnlr1Q8CGK5 535 aa14.23□□□□□ -0.13
Ccdc42-201ENSMUST00000063006 EprsQ8CGC7 1512 aaKnown RBP14.23□□□□□ -0.13
Ccdc42-201ENSMUST00000063006 Clip1Q922J3 1391 aa14.22□□□□□ -0.13
Ccdc42-201ENSMUST00000063006 Eea1Q8BL66 1411 aa14.2□□□□□ -0.14
Ccdc42-201ENSMUST00000063006 Ttc37F8VPK0 1563 aa14.2□□□□□ -0.14
Ccdc42-201ENSMUST00000063006 Plekhg3Q4VAC9 1341 aa14.19□□□□□ -0.14
Ccdc42-201ENSMUST00000063006 Myt1lP97500 1187 aa14.19□□□□□ -0.14
Ccdc42-201ENSMUST00000063006 AdgbG3UZ78 1657 aa14.19□□□□□ -0.14
Ccdc42-201ENSMUST00000063006 Zeb1Q64318 1117 aa14.18□□□□□ -0.14
Ccdc42-201ENSMUST00000063006 Clasp1Q80TV8 1535 aaKnown RBP14.18□□□□□ -0.14
Ccdc42-201ENSMUST00000063006 Mapkbp1Q6NS57 1503 aa14.16□□□□□ -0.14
Ccdc42-201ENSMUST00000063006 Ehmt2Q9Z148 1263 aaKnown RBP14.16□□□□□ -0.14
Ccdc42-201ENSMUST00000063006 Carmil1Q6EDY6 1374 aa14.16□□□□□ -0.14
Ccdc42-201ENSMUST00000063006 Rpap1Q80TE0 1409 aa14.15□□□□□ -0.14
Ccdc42-201ENSMUST00000063006 Alpk3Q924C5 1678 aa14.15□□□□□ -0.14
Ccdc42-201ENSMUST00000063006 Depdc5P61460 1591 aa14.13□□□□□ -0.15
Ccdc42-201ENSMUST00000063006 Jph4Q80WT0 628 aa14.13□□□□□ -0.15
Ccdc42-201ENSMUST00000063006 Arid3cA6PWV5 409 aa14.11□□□□□ -0.15
Ccdc42-201ENSMUST00000063006 Fkbp15Q6P9Q6 1216 aaKnown RBP14.11□□□□□ -0.15
Ccdc42-201ENSMUST00000063006 Dnajc5gQ8C632 165 aa14.11□□□□□ -0.15
Ccdc42-201ENSMUST00000063006 Znf608Q56A10 1511 aa14.1□□□□□ -0.15
Ccdc42-201ENSMUST00000063006 Chrna2Q91X60 512 aa14.1□□□□□ -0.15
Ccdc42-201ENSMUST00000063006 Abca5Q8K448 1642 aa14.1□□□□□ -0.15
Ccdc42-201ENSMUST00000063006 Lrrc9Q8CDN9 1456 aa14.1□□□□□ -0.15
Ccdc42-201ENSMUST00000063006 Polr1aO35134 1717 aaKnown RBP14.09□□□□□ -0.15
Ccdc42-201ENSMUST00000063006 Setd5Q5XJV7 1441 aa14.08□□□□□ -0.15
Ccdc42-201ENSMUST00000063006 Arhgef11Q68FM7 1552 aa14.08□□□□□ -0.16
Ccdc42-201ENSMUST00000063006 Gm7298A0A0N4SVU1 1476 aa14.07□□□□□ -0.16
Ccdc42-201ENSMUST00000063006 Fndc1E9Q043 1732 aa14.06□□□□□ -0.16
Ccdc42-201ENSMUST00000063006 NefmP08553 848 aa14.04□□□□□ -0.16
Ccdc42-201ENSMUST00000063006 Zfyve16Q80U44 1528 aa14.04□□□□□ -0.16
Ccdc42-201ENSMUST00000063006 Cul7Q8VE73 1689 aa14.02□□□□□ -0.16
Ccdc42-201ENSMUST00000063006 Erich3F6QRE9 1637 aa14.02□□□□□ -0.16
Ccdc42-201ENSMUST00000063006 Fyco1Q8VDC1 1437 aa14.02□□□□□ -0.16
Ccdc42-201ENSMUST00000063006 Rsph4aQ8BYM7 716 aa14.02□□□□□ -0.17
Ccdc42-201ENSMUST00000063006 Kdm5bQ80Y84 1544 aa14□□□□□ -0.17
Ccdc42-201ENSMUST00000063006 Rrbp1Q99PL5 1605 aaKnown RBP14□□□□□ -0.17
Ccdc42-201ENSMUST00000063006 WrnO09053 1401 aa13.99□□□□□ -0.17
Ccdc42-201ENSMUST00000063006 CntlnA2AM05 1397 aa13.99□□□□□ -0.17
Ccdc42-201ENSMUST00000063006 Igf1rQ60751 1373 aa13.98□□□□□ -0.17
Ccdc42-201ENSMUST00000063006 Arap1Q4LDD4 1452 aa13.98□□□□□ -0.17
Ccdc42-201ENSMUST00000063006 Wdr7Q920I9 1489 aa13.96□□□□□ -0.17
Ccdc42-201ENSMUST00000063006 Ankrd26Q811D2 1581 aa13.96□□□□□ -0.18
Ccdc42-201ENSMUST00000063006 NhsB1AV60 1647 aa13.95□□□□□ -0.18
Ccdc42-201ENSMUST00000063006 Tiam1Q60610 1591 aa13.92□□□□□ -0.18
Ccdc42-201ENSMUST00000063006 Cux1P53564 1515 aa13.92□□□□□ -0.18
Ccdc42-201ENSMUST00000063006 Mier1Q5UAK0 511 aa13.91□□□□□ -0.18
Ccdc42-201ENSMUST00000063006 UbtfP25976 765 aaKnown RBP13.9□□□□□ -0.18
Ccdc42-201ENSMUST00000063006 AglF8VPN4 1532 aa13.9□□□□□ -0.19
Ccdc42-201ENSMUST00000063006 Brwd3A2AHJ4 1799 aa13.89□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms