RNA–Protein interactions for RNA: ENSMUST00000060479.13

Ush2a-201, Transcript of Usherin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ush2a, Length 15,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2a-201ENSMUST00000060479 Setd5Q5XJV7 1441 aa6,95□□□□□ -1,3
Ush2a-201ENSMUST00000060479 Sin3aQ60520 1274 aaKnown RBP6,94□□□□□ -1,3
Ush2a-201ENSMUST00000060479 Wwc2Q6NXJ0 1187 aa6,94□□□□□ -1,3
Ush2a-201ENSMUST00000060479 Supt16hQ920B9 1047 aa6,94□□□□□ -1,3
Ush2a-201ENSMUST00000060479 Nolc1E9Q5C9 702 aaKnown RBP6,93□□□□□ -1,3
Ush2a-201ENSMUST00000060479 Cwc22Q8C5N3 908 aaKnown RBP6,93□□□□□ -1,3
Ush2a-201ENSMUST00000060479 Hdac5Q9Z2V6 1113 aa6,93□□□□□ -1,3
Ush2a-201ENSMUST00000060479 Rgl3Q3UYI5 709 aa6,91□□□□□ -1,3
Ush2a-201ENSMUST00000060479 Golga3P55937 1487 aa6,91□□□□□ -1,3
Ush2a-201ENSMUST00000060479 CanxP35564 591 aaKnown RBP6,9□□□□□ -1,3
Ush2a-201ENSMUST00000060479 Prdm10Q3UTQ7 1184 aa6,9□□□□□ -1,31
Ush2a-201ENSMUST00000060479 Fkbp15Q6P9Q6 1216 aaKnown RBP6,9□□□□□ -1,31
Ush2a-201ENSMUST00000060479 Gm35339A0A140LHH9 1649 aa6,9□□□□□ -1,31
Ush2a-201ENSMUST00000060479 Polr3glQ8R0C0 218 aa6,89□□□□□ -1,31
Ush2a-201ENSMUST00000060479 Erich6D3Z6S9 713 aa6,88□□□□□ -1,31
Ush2a-201ENSMUST00000060479 Tcerg1Q8CGF7 1100 aaKnown RBP6,87□□□□□ -1,31
Ush2a-201ENSMUST00000060479 ArxO35085 564 aa6,87□□□□□ -1,31
Ush2a-201ENSMUST00000060479 Eea1Q8BL66 1411 aa6,85□□□□□ -1,31
Ush2a-201ENSMUST00000060479 CatipB9EKE5 520 aa6,85□□□□□ -1,31
Ush2a-201ENSMUST00000060479 Ifnlr1Q8CGK5 535 aa6,85□□□□□ -1,31
Ush2a-201ENSMUST00000060479 Card11Q8CIS0 1159 aa6,84□□□□□ -1,31
Ush2a-201ENSMUST00000060479 Grwd1Q810D6 446 aaKnown RBP6,84□□□□□ -1,31
Ush2a-201ENSMUST00000060479 Ipo9Q91YE6 1041 aa6,84□□□□□ -1,31
Ush2a-201ENSMUST00000060479 Ppm1gQ61074 542 aa6,84□□□□□ -1,31
Ush2a-201ENSMUST00000060479 Aebp1Q640N1 1128 aa6,84□□□□□ -1,31
Ush2a-201ENSMUST00000060479 Gm13695A2AK44 830 aa6,84□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Clstn2Q9ER65 966 aa6,84□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Ccdc88bQ4QRL3 1481 aa6,83□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Irx3P81067 507 aa6,83□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Znf710Q3U288 666 aa6,83□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Mphosph9A6H5Y1 991 aa6,82□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Exoc6Q8R313 802 aa6,82□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Dbr1Q923B1 550 aa6,82□□□□□ -1,32
Ush2a-201ENSMUST00000060479 B4galnt3Q6L8S8 986 aa6,81□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Trim30dE9PWL0 497 aa6,81□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Apbb1Q9QXJ1 710 aa6,81□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Pkd2O35245 966 aa6,81□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Hsp90ab1P11499 724 aaKnown RBP6,8□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Rundc1Q0VDN7 615 aa6,8□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Cep162Q6ZQ06 1403 aa6,8□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Htatsf1Q8BGC0 757 aa6,79□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Trim26Q99PN3 545 aa6,79□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Kif15Q6P9L6 1387 aa6,78□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Pknox2Q8BG99 474 aa6,78□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Rwdd1Q9CQK7 243 aa6,78□□□□□ -1,32
Ush2a-201ENSMUST00000060479 DekQ7TNV0 380 aaKnown RBP6,78□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Cabp1Q9JLK7 227 aa6,78□□□□□ -1,32
Ush2a-201ENSMUST00000060479 Neurod2Q62414 383 aa6,77□□□□□ -1,33
Ush2a-201ENSMUST00000060479 Mbd3Q9Z2D8 285 aaKnown RBP6,77□□□□□ -1,33
Ush2a-201ENSMUST00000060479 Rangap1P46061 589 aaKnown RBP6,77□□□□□ -1,33
Ush2a-201ENSMUST00000060479 Mia2Q91ZV0 1396 aa6,77□□□□□ -1,33
Ush2a-201ENSMUST00000060479 Kdm2aP59997 1161 aa6,76□□□□□ -1,33
Ush2a-201ENSMUST00000060479 Chmp5Q9D7S9 219 aa6,76□□□□□ -1,33
Ush2a-201ENSMUST00000060479 Zscan21Q07231 555 aa6,76□□□□□ -1,33
Ush2a-201ENSMUST00000060479 Mroh3A0A1D5RM54 893 aa6,75□□□□□ -1,33
Ush2a-201ENSMUST00000060479 Mak16Q8BGS0 296 aaKnown RBP6,75□□□□□ -1,33
Ush2a-201ENSMUST00000060479 Trak1Q6PD31 939 aa6,74□□□□□ -1,33
Ush2a-201ENSMUST00000060479 Atp1b4Q99ME6 356 aa6,74□□□□□ -1,33
Ush2a-201ENSMUST00000060479 Rrp7aQ9D1C9 280 aaKnown RBP6,74□□□□□ -1,33
Ush2a-201ENSMUST00000060479 Arhgap27A2AB59 869 aa6,74□□□□□ -1,33
Ush2a-201ENSMUST00000060479 Gm20521D3Z5F7 333 aa6,74□□□□□ -1,33
Ush2a-201ENSMUST00000060479 Ythdc1E9Q5K9 736 aaKnown RBP6,74□□□□□ -1,33
Ush2a-201ENSMUST00000060479 AU015836B2RUM3 263 aa6,74□□□□□ -1,33
Ush2a-201ENSMUST00000060479 EspnQ9ET47 871 aa6,73□□□□□ -1,33
Ush2a-201ENSMUST00000060479 Vsig10D3YX43 558 aa6,73□□□□□ -1,33
Ush2a-201ENSMUST00000060479 Gtf3c3Q3TMP1 882 aa6,73□□□□□ -1,33
Ush2a-201ENSMUST00000060479 ChgaP26339 463 aaKnown RBP6,73□□□□□ -1,33
Ush2a-201ENSMUST00000060479 NacadQ5SWP3 1504 aa6,72□□□□□ -1,33
Ush2a-201ENSMUST00000060479 PnisrA2AJT4 805 aaKnown RBP6,72□□□□□ -1,33
Ush2a-201ENSMUST00000060479 Lmod3E9QA62 571 aa6,71□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Spryd3E9Q9B3 442 aa6,71□□□□□ -1,34
Ush2a-201ENSMUST00000060479 CntlnA2AM05 1397 aa6,71□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Plcb2A3KGF7 1181 aa6,7□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Slc4a2P13808 1237 aaKnown RBP6,7□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Dnai1Q8C0M8 701 aa6,7□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Trim44Q9QXA7 346 aa6,7□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Ipo8Q7TMY7 1010 aa6,7□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Pak3Q61036 559 aa6,7□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Map4P27546 1125 aaKnown RBP6,69□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Armcx1Q9CX83 456 aa6,69□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Pank3Q8R2W9 370 aa6,69□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Washc2Q6PGL7 1334 aa6,69□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Srpk2O54781 681 aaKnown RBP6,68□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Tmf1B9EKI3 1091 aa6,67□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Speer4f1Q9D5Q6 258 aa6,67□□□□□ -1,34
Ush2a-201ENSMUST00000060479 NudcO35685 332 aaKnown RBP6,67□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Dnttip2Q8R2M2 758 aaKnown RBP6,67□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Smg6P61406 1418 aaKnown RBP6,67□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Rb1cc1Q9ESK9 1588 aa6,66□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Stk24Q99KH8 431 aa6,65□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Cnga1P29974 684 aa6,65□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Ifit1bl1D3Z6F0 470 aa6,65□□□□□ -1,34
Ush2a-201ENSMUST00000060479 Esx1O88933 382 aa6,64□□□□□ -1,35
Ush2a-201ENSMUST00000060479 Map7O88735 730 aa6,64□□□□□ -1,35
Ush2a-201ENSMUST00000060479 Taok2Q6ZQ29 1240 aa6,64□□□□□ -1,35
Ush2a-201ENSMUST00000060479 Gtf2e1Q9D0D5 440 aa6,64□□□□□ -1,35
Ush2a-201ENSMUST00000060479 IqubQ8CDK3 788 aa6,64□□□□□ -1,35
Ush2a-201ENSMUST00000060479 Mre11Q61216 706 aa6,63□□□□□ -1,35
Ush2a-201ENSMUST00000060479 CrbnQ8C7D2 445 aa6,63□□□□□ -1,35
Ush2a-201ENSMUST00000060479 Mtus2Q3UHD3 1353 aa6,63□□□□□ -1,35
Retrieved 100 of 22,080 RNA–protein pairs in 206 ms