RNA–Protein interactions for RNA: ENSMUST00000060479.13

Ush2a-201, Transcript of Usherin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ush2a, Length 15,695 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2a-201ENSMUST00000060479 Setd5Q5XJV7 1441 aa6.95□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Sin3aQ60520 1274 aaKnown RBP6.94□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Wwc2Q6NXJ0 1187 aa6.94□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Supt16hQ920B9 1047 aa6.94□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Nolc1E9Q5C9 702 aaKnown RBP6.93□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Cwc22Q8C5N3 908 aaKnown RBP6.93□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Hdac5Q9Z2V6 1113 aa6.93□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Rgl3Q3UYI5 709 aa6.91□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Golga3P55937 1487 aa6.91□□□□□ -1.3
Ush2a-201ENSMUST00000060479 CanxP35564 591 aaKnown RBP6.9□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Prdm10Q3UTQ7 1184 aa6.9□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Fkbp15Q6P9Q6 1216 aaKnown RBP6.9□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Gm35339A0A140LHH9 1649 aa6.9□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Polr3glQ8R0C0 218 aa6.89□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Erich6D3Z6S9 713 aa6.88□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Tcerg1Q8CGF7 1100 aaKnown RBP6.87□□□□□ -1.31
Ush2a-201ENSMUST00000060479 ArxO35085 564 aa6.87□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Eea1Q8BL66 1411 aa6.85□□□□□ -1.31
Ush2a-201ENSMUST00000060479 CatipB9EKE5 520 aa6.85□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Ifnlr1Q8CGK5 535 aa6.85□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Card11Q8CIS0 1159 aa6.84□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Grwd1Q810D6 446 aaKnown RBP6.84□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Ipo9Q91YE6 1041 aa6.84□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Ppm1gQ61074 542 aa6.84□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Aebp1Q640N1 1128 aa6.84□□□□□ -1.31
Ush2a-201ENSMUST00000060479 Gm13695A2AK44 830 aa6.84□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Clstn2Q9ER65 966 aa6.84□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Ccdc88bQ4QRL3 1481 aa6.83□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Irx3P81067 507 aa6.83□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Znf710Q3U288 666 aa6.83□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Mphosph9A6H5Y1 991 aa6.82□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Exoc6Q8R313 802 aa6.82□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Dbr1Q923B1 550 aa6.82□□□□□ -1.32
Ush2a-201ENSMUST00000060479 B4galnt3Q6L8S8 986 aa6.81□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Trim30dE9PWL0 497 aa6.81□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Apbb1Q9QXJ1 710 aa6.81□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Pkd2O35245 966 aa6.81□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Hsp90ab1P11499 724 aaKnown RBP6.8□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Rundc1Q0VDN7 615 aa6.8□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Cep162Q6ZQ06 1403 aa6.8□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Htatsf1Q8BGC0 757 aa6.79□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Trim26Q99PN3 545 aa6.79□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Kif15Q6P9L6 1387 aa6.78□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Pknox2Q8BG99 474 aa6.78□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Rwdd1Q9CQK7 243 aa6.78□□□□□ -1.32
Ush2a-201ENSMUST00000060479 DekQ7TNV0 380 aaKnown RBP6.78□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Cabp1Q9JLK7 227 aa6.78□□□□□ -1.32
Ush2a-201ENSMUST00000060479 Neurod2Q62414 383 aa6.77□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Mbd3Q9Z2D8 285 aaKnown RBP6.77□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Rangap1P46061 589 aaKnown RBP6.77□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Mia2Q91ZV0 1396 aa6.77□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Kdm2aP59997 1161 aa6.76□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Chmp5Q9D7S9 219 aa6.76□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Zscan21Q07231 555 aa6.76□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Mroh3A0A1D5RM54 893 aa6.75□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Mak16Q8BGS0 296 aaKnown RBP6.75□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Trak1Q6PD31 939 aa6.74□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Atp1b4Q99ME6 356 aa6.74□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Rrp7aQ9D1C9 280 aaKnown RBP6.74□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Arhgap27A2AB59 869 aa6.74□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Gm20521D3Z5F7 333 aa6.74□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Ythdc1E9Q5K9 736 aaKnown RBP6.74□□□□□ -1.33
Ush2a-201ENSMUST00000060479 AU015836B2RUM3 263 aa6.74□□□□□ -1.33
Ush2a-201ENSMUST00000060479 EspnQ9ET47 871 aa6.73□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Vsig10D3YX43 558 aa6.73□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Gtf3c3Q3TMP1 882 aa6.73□□□□□ -1.33
Ush2a-201ENSMUST00000060479 ChgaP26339 463 aaKnown RBP6.73□□□□□ -1.33
Ush2a-201ENSMUST00000060479 NacadQ5SWP3 1504 aa6.72□□□□□ -1.33
Ush2a-201ENSMUST00000060479 PnisrA2AJT4 805 aaKnown RBP6.72□□□□□ -1.33
Ush2a-201ENSMUST00000060479 Lmod3E9QA62 571 aa6.71□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Spryd3E9Q9B3 442 aa6.71□□□□□ -1.34
Ush2a-201ENSMUST00000060479 CntlnA2AM05 1397 aa6.71□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Plcb2A3KGF7 1181 aa6.7□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Slc4a2P13808 1237 aaKnown RBP6.7□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Dnai1Q8C0M8 701 aa6.7□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Trim44Q9QXA7 346 aa6.7□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Ipo8Q7TMY7 1010 aa6.7□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Pak3Q61036 559 aa6.7□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Map4P27546 1125 aaKnown RBP6.69□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Armcx1Q9CX83 456 aa6.69□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Pank3Q8R2W9 370 aa6.69□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Washc2Q6PGL7 1334 aa6.69□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Srpk2O54781 681 aaKnown RBP6.68□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Tmf1B9EKI3 1091 aa6.67□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Speer4f1Q9D5Q6 258 aa6.67□□□□□ -1.34
Ush2a-201ENSMUST00000060479 NudcO35685 332 aaKnown RBP6.67□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Dnttip2Q8R2M2 758 aaKnown RBP6.67□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Smg6P61406 1418 aaKnown RBP6.67□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Rb1cc1Q9ESK9 1588 aa6.66□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Stk24Q99KH8 431 aa6.65□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Cnga1P29974 684 aa6.65□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Ifit1bl1D3Z6F0 470 aa6.65□□□□□ -1.34
Ush2a-201ENSMUST00000060479 Esx1O88933 382 aa6.64□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Map7O88735 730 aa6.64□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Taok2Q6ZQ29 1240 aa6.64□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Gtf2e1Q9D0D5 440 aa6.64□□□□□ -1.35
Ush2a-201ENSMUST00000060479 IqubQ8CDK3 788 aa6.64□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Mre11Q61216 706 aa6.63□□□□□ -1.35
Ush2a-201ENSMUST00000060479 CrbnQ8C7D2 445 aa6.63□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Mtus2Q3UHD3 1353 aa6.63□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms