RNA–Protein interactions for RNA: ENSMUST00000048680.7

Hoxa9-201, Transcript of Homeobox protein Hox-A9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxa9, Length 3,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9-201ENSMUST00000048680 Tiam1Q60610 1591 aa17.53■□□□□ 0.4
Hoxa9-201ENSMUST00000048680 Duox2A2AQ99 1517 aa17.51■□□□□ 0.39
Hoxa9-201ENSMUST00000048680 Myt1lP97500 1187 aa17.51■□□□□ 0.39
Hoxa9-201ENSMUST00000048680 Mroh2bQ7M6Y6 1581 aa17.48■□□□□ 0.39
Hoxa9-201ENSMUST00000048680 Eif4g3Q80XI3 1579 aaKnown RBP17.46■□□□□ 0.38
Hoxa9-201ENSMUST00000048680 Ankrd26Q811D2 1581 aa17.45■□□□□ 0.38
Hoxa9-201ENSMUST00000048680 Csrnp3P59055 597 aa17.45■□□□□ 0.38
Hoxa9-201ENSMUST00000048680 Efcab5A0JP43 1406 aa17.45■□□□□ 0.38
Hoxa9-201ENSMUST00000048680 Arap1Q4LDD4 1452 aa17.45■□□□□ 0.38
Hoxa9-201ENSMUST00000048680 Eea1Q8BL66 1411 aa17.43■□□□□ 0.38
Hoxa9-201ENSMUST00000048680 Aebp2Q9Z248 504 aaKnown RBP17.42■□□□□ 0.38
Hoxa9-201ENSMUST00000048680 PtprkP35822 1457 aa17.41■□□□□ 0.38
Hoxa9-201ENSMUST00000048680 Ift140E9PY46 1464 aa17.39■□□□□ 0.37
Hoxa9-201ENSMUST00000048680 Samd9lQ69Z37 1561 aa17.36■□□□□ 0.37
Hoxa9-201ENSMUST00000048680 Polr1aO35134 1717 aaKnown RBP17.35■□□□□ 0.37
Hoxa9-201ENSMUST00000048680 Clip1Q922J3 1391 aa17.35■□□□□ 0.37
Hoxa9-201ENSMUST00000048680 Fhod3Q76LL6 1578 aa17.34■□□□□ 0.37
Hoxa9-201ENSMUST00000048680 1700123L14RikQ3V2K7 440 aa17.34■□□□□ 0.37
Hoxa9-201ENSMUST00000048680 Disp1Q3TDN0 1521 aa17.33■□□□□ 0.36
Hoxa9-201ENSMUST00000048680 SynmQ70IV5 1561 aa17.31■□□□□ 0.36
Hoxa9-201ENSMUST00000048680 Cdk11bP24788 784 aaKnown RBP17.3■□□□□ 0.36
Hoxa9-201ENSMUST00000048680 Anks4bQ8K3X6 423 aa17.3■□□□□ 0.36
Hoxa9-201ENSMUST00000048680 Camsap2Q8C1B1 1461 aa17.3■□□□□ 0.36
Hoxa9-201ENSMUST00000048680 Pcf11G3X9Z4 1553 aa17.3■□□□□ 0.36
Hoxa9-201ENSMUST00000048680 Nop58Q6DFW4 536 aaKnown RBP17.29■□□□□ 0.36
Hoxa9-201ENSMUST00000048680 Gm38655A0A286YDK6 273 aa17.27■□□□□ 0.36
Hoxa9-201ENSMUST00000048680 Rpap1Q80TE0 1409 aa17.27■□□□□ 0.36
Hoxa9-201ENSMUST00000048680 Cux1P53564 1515 aa17.26■□□□□ 0.35
Hoxa9-201ENSMUST00000048680 Rusc2Q80U22 1514 aa17.26■□□□□ 0.35
Hoxa9-201ENSMUST00000048680 Npm2Q80W85 207 aa17.25■□□□□ 0.35
Hoxa9-201ENSMUST00000048680 Nup160Q9Z0W3 1402 aaKnown RBP17.24■□□□□ 0.35
Hoxa9-201ENSMUST00000048680 Rad54l2Q99NG0 1466 aa17.24■□□□□ 0.35
Hoxa9-201ENSMUST00000048680 Pbrm1Q8BSQ9 1634 aaKnown RBP17.24■□□□□ 0.35
Hoxa9-201ENSMUST00000048680 Cul7Q8VE73 1689 aa17.23■□□□□ 0.35
Hoxa9-201ENSMUST00000048680 Naip1Q9QWK5 1403 aa17.23■□□□□ 0.35
Hoxa9-201ENSMUST00000048680 Setd1bQ8CFT2 1985 aa17.23■□□□□ 0.35
Hoxa9-201ENSMUST00000048680 EprsQ8CGC7 1512 aaKnown RBP17.22■□□□□ 0.35
Hoxa9-201ENSMUST00000048680 ClspnQ80YR7 1315 aa17.2■□□□□ 0.34
Hoxa9-201ENSMUST00000048680 Slx4Q6P1D7 1565 aa17.2■□□□□ 0.34
Hoxa9-201ENSMUST00000048680 Carmil1Q6EDY6 1374 aa17.2■□□□□ 0.34
Hoxa9-201ENSMUST00000048680 Magi3Q9EQJ9 1476 aa17.2■□□□□ 0.34
Hoxa9-201ENSMUST00000048680 Cc2d2bA0A286YDU8 1405 aa17.19■□□□□ 0.34
Hoxa9-201ENSMUST00000048680 Grin2aP35436 1464 aa17.19■□□□□ 0.34
Hoxa9-201ENSMUST00000048680 Ankrd36D3Z4K0 1415 aa17.18■□□□□ 0.34
Hoxa9-201ENSMUST00000048680 CntlnA2AM05 1397 aa17.18■□□□□ 0.34
Hoxa9-201ENSMUST00000048680 Plekhg3Q4VAC9 1341 aa17.16■□□□□ 0.34
Hoxa9-201ENSMUST00000048680 UacaQ8CGB3 1411 aa17.16■□□□□ 0.34
Hoxa9-201ENSMUST00000048680 BlmO88700 1416 aa17.15■□□□□ 0.34
Hoxa9-201ENSMUST00000048680 Gcc2Q8CHG3 1679 aa17.14■□□□□ 0.33
Hoxa9-201ENSMUST00000048680 Abca5Q8K448 1642 aa17.13■□□□□ 0.33
Hoxa9-201ENSMUST00000048680 Pla2r1Q62028 1487 aa17.12■□□□□ 0.33
Hoxa9-201ENSMUST00000048680 TonslQ6NZL6 1363 aa17.12■□□□□ 0.33
Hoxa9-201ENSMUST00000048680 Fhad1A6PWD2 1420 aa17.11■□□□□ 0.33
Hoxa9-201ENSMUST00000048680 Shroom2A2ALU4 1481 aa17.11■□□□□ 0.33
Hoxa9-201ENSMUST00000048680 Lmtk2Q3TYD6 1471 aa17.11■□□□□ 0.33
Hoxa9-201ENSMUST00000048680 Fyco1Q8VDC1 1437 aa17.11■□□□□ 0.33
Hoxa9-201ENSMUST00000048680 Setd5Q5XJV7 1441 aa17.1■□□□□ 0.33
Hoxa9-201ENSMUST00000048680 Setbp1Q9Z180 1582 aa17.07■□□□□ 0.32
Hoxa9-201ENSMUST00000048680 Vps8Q0P5W1 1427 aa17.07■□□□□ 0.32
Hoxa9-201ENSMUST00000048680 CenpbP27790 599 aa17.04■□□□□ 0.32
Hoxa9-201ENSMUST00000048680 Adamts12Q811B3 1600 aa17.03■□□□□ 0.32
Hoxa9-201ENSMUST00000048680 Mia2Q91ZV0 1396 aa17.02■□□□□ 0.32
Hoxa9-201ENSMUST00000048680 Ap3b1Q9Z1T1 1105 aa17.02■□□□□ 0.31
Hoxa9-201ENSMUST00000048680 Eid3Q3V124 375 aa17.01■□□□□ 0.31
Hoxa9-201ENSMUST00000048680 Kif21bQ9QXL1 1668 aa17.01■□□□□ 0.31
Hoxa9-201ENSMUST00000048680 Gm1043A0A140LJC2 1431 aa17■□□□□ 0.31
Hoxa9-201ENSMUST00000048680 Ccer2J3QPU5 274 aa16.98■□□□□ 0.31
Hoxa9-201ENSMUST00000048680 Pabpn1Q8CCS6 302 aaKnown RBP16.98■□□□□ 0.31
Hoxa9-201ENSMUST00000048680 Fgd6Q69ZL1 1399 aa16.96■□□□□ 0.31
Hoxa9-201ENSMUST00000048680 Mapk8ip2Q9ERE9 830 aa16.96■□□□□ 0.31
Hoxa9-201ENSMUST00000048680 Rfx7F8VPJ6 1459 aa16.95■□□□□ 0.3
Hoxa9-201ENSMUST00000048680 Lamc1P02468 1607 aaKnown RBP16.94■□□□□ 0.3
Hoxa9-201ENSMUST00000048680 Naip2Q9QUK4 1447 aa16.94■□□□□ 0.3
Hoxa9-201ENSMUST00000048680 3425401B19RikD3Z1D3 1412 aa16.93■□□□□ 0.3
Hoxa9-201ENSMUST00000048680 Pprc1Q6NZN1 1644 aa16.92■□□□□ 0.3
Hoxa9-201ENSMUST00000048680 WizO88286 1684 aaKnown RBP16.92■□□□□ 0.3
Hoxa9-201ENSMUST00000048680 Aplp2Q06335 707 aa16.91■□□□□ 0.3
Hoxa9-201ENSMUST00000048680 Abca16E9PWJ7 1678 aa16.91■□□□□ 0.3
Hoxa9-201ENSMUST00000048680 PxdnQ3UQ28 1475 aa16.89■□□□□ 0.29
Hoxa9-201ENSMUST00000048680 Pelp1Q9DBD5 1123 aaKnown RBP16.88■□□□□ 0.29
Hoxa9-201ENSMUST00000048680 Abcc2Q8VI47 1543 aa16.88■□□□□ 0.29
Hoxa9-201ENSMUST00000048680 Gm7298A0A0N4SVU1 1476 aa16.87■□□□□ 0.29
Hoxa9-201ENSMUST00000048680 CadpsQ80TJ1 1355 aa16.86■□□□□ 0.29
Hoxa9-201ENSMUST00000048680 Arhgap27A2AB59 869 aa16.85■□□□□ 0.29
Hoxa9-201ENSMUST00000048680 Dnmt1P13864 1620 aaKnown RBP16.84■□□□□ 0.29
Hoxa9-201ENSMUST00000048680 Ncoa2Q61026 1462 aa16.84■□□□□ 0.29
Hoxa9-201ENSMUST00000048680 Dennd4bQ3U1Y4 1499 aa16.84■□□□□ 0.29
Hoxa9-201ENSMUST00000048680 Dnajc5P60904 198 aa16.83■□□□□ 0.28
Hoxa9-201ENSMUST00000048680 DiexfQ8BTT6 772 aaKnown RBP16.83■□□□□ 0.28
Hoxa9-201ENSMUST00000048680 AknaQ80VW7 1404 aa16.82■□□□□ 0.28
Hoxa9-201ENSMUST00000048680 Map3k4O08648 1597 aa16.82■□□□□ 0.28
Hoxa9-201ENSMUST00000048680 Col17a1Q07563 1470 aa16.81■□□□□ 0.28
Hoxa9-201ENSMUST00000048680 Soga1E1U8D0 1418 aa16.8■□□□□ 0.28
Hoxa9-201ENSMUST00000048680 Abcc1O35379 1528 aa16.78■□□□□ 0.28
Hoxa9-201ENSMUST00000048680 Arhgef40Q3UPH7 1517 aa16.77■□□□□ 0.28
Hoxa9-201ENSMUST00000048680 BC005561E9Q5E2 1589 aa16.76■□□□□ 0.27
Hoxa9-201ENSMUST00000048680 SafbD3YXK2 937 aaKnown RBP16.76■□□□□ 0.27
Hoxa9-201ENSMUST00000048680 Myt1Q8CFC2 1127 aa16.76■□□□□ 0.27
Hoxa9-201ENSMUST00000048680 Neo1P97798 1493 aa16.76■□□□□ 0.27
Hoxa9-201ENSMUST00000048680 A2mQ6GQT1 1474 aa16.76■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms