RNA–Protein interactions for RNA: ENSMUST00000040089.4

Rnf43-201, Transcript of E3 ubiquitin-protein ligase RNF43, mousemouse

TSL 1 (best) BASIC

Gene Rnf43, Length 3,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43-201ENSMUST00000040089 Dhx29Q6PGC1 1365 aaKnown RBP13.29□□□□□ -0.28
Rnf43-201ENSMUST00000040089 Zbtb4Q5F293 982 aa13.29□□□□□ -0.28
Rnf43-201ENSMUST00000040089 Eea1Q8BL66 1411 aa13.29□□□□□ -0.28
Rnf43-201ENSMUST00000040089 Baz1bQ9Z277 1479 aa13.27□□□□□ -0.29
Rnf43-201ENSMUST00000040089 DiexfQ8BTT6 772 aaKnown RBP13.26□□□□□ -0.29
Rnf43-201ENSMUST00000040089 Cc2d2aQ8CFW7 1633 aa13.26□□□□□ -0.29
Rnf43-201ENSMUST00000040089 Ttbk1Q6PCN3 1308 aa13.25□□□□□ -0.29
Rnf43-201ENSMUST00000040089 Os9Q8K2C7 672 aa13.23□□□□□ -0.29
Rnf43-201ENSMUST00000040089 Erich6D3Z6S9 713 aa13.22□□□□□ -0.29
Rnf43-201ENSMUST00000040089 AknaQ80VW7 1404 aa13.19□□□□□ -0.3
Rnf43-201ENSMUST00000040089 Aebp1Q640N1 1128 aa13.19□□□□□ -0.3
Rnf43-201ENSMUST00000040089 Rpap1Q80TE0 1409 aa13.18□□□□□ -0.3
Rnf43-201ENSMUST00000040089 Wdr62Q3U3T8 1523 aa13.17□□□□□ -0.3
Rnf43-201ENSMUST00000040089 Arid3cA6PWV5 409 aa13.15□□□□□ -0.3
Rnf43-201ENSMUST00000040089 Rad54l2Q99NG0 1466 aa13.13□□□□□ -0.31
Rnf43-201ENSMUST00000040089 PtprkP35822 1457 aa13.12□□□□□ -0.31
Rnf43-201ENSMUST00000040089 Gm13697A2AK42 830 aa13.1□□□□□ -0.31
Rnf43-201ENSMUST00000040089 Eif5bQ05D44 1216 aaKnown RBP13.1□□□□□ -0.31
Rnf43-201ENSMUST00000040089 Tnnt3Q9QZ47 272 aa13.1□□□□□ -0.31
Rnf43-201ENSMUST00000040089 Kif27Q7M6Z4 1394 aa13.09□□□□□ -0.31
Rnf43-201ENSMUST00000040089 Urb2E9Q7L1 1524 aaKnown RBP13.06□□□□□ -0.32
Rnf43-201ENSMUST00000040089 Mrc2Q64449 1479 aa13.06□□□□□ -0.32
Rnf43-201ENSMUST00000040089 Duox2A2AQ99 1517 aa13.06□□□□□ -0.32
Rnf43-201ENSMUST00000040089 Prdm10Q3UTQ7 1184 aa13.05□□□□□ -0.32
Rnf43-201ENSMUST00000040089 Carmil1Q6EDY6 1374 aa13.05□□□□□ -0.32
Rnf43-201ENSMUST00000040089 Top2aQ01320 1528 aaKnown RBP13.04□□□□□ -0.32
Rnf43-201ENSMUST00000040089 Atp1b4Q99ME6 356 aa13.02□□□□□ -0.33
Rnf43-201ENSMUST00000040089 Fam71e1A1L3C1 212 aa13.01□□□□□ -0.33
Rnf43-201ENSMUST00000040089 Top2bQ64511 1612 aa13.01□□□□□ -0.33
Rnf43-201ENSMUST00000040089 Rrp7aQ9D1C9 280 aaKnown RBP13□□□□□ -0.33
Rnf43-201ENSMUST00000040089 Bcl11aQ9QYE3 773 aa13□□□□□ -0.33
Rnf43-201ENSMUST00000040089 Shroom4Q1W617 1475 aa12.99□□□□□ -0.33
Rnf43-201ENSMUST00000040089 Efcab5A0JP43 1406 aa12.99□□□□□ -0.33
Rnf43-201ENSMUST00000040089 PogzQ8BZH4 1409 aaKnown RBP12.98□□□□□ -0.33
Rnf43-201ENSMUST00000040089 Grin2bQ01097 1482 aa12.98□□□□□ -0.33
Rnf43-201ENSMUST00000040089 WrnO09053 1401 aa12.98□□□□□ -0.33
Rnf43-201ENSMUST00000040089 Plb1Q3TTY0 1478 aa12.97□□□□□ -0.33
Rnf43-201ENSMUST00000040089 Cabp1Q9JLK7 227 aa12.97□□□□□ -0.33
Rnf43-201ENSMUST00000040089 Rgl3Q3UYI5 709 aa12.95□□□□□ -0.34
Rnf43-201ENSMUST00000040089 Arhgap35Q91YM2 1499 aa12.95□□□□□ -0.34
Rnf43-201ENSMUST00000040089 Stra8P70278 393 aa12.95□□□□□ -0.34
Rnf43-201ENSMUST00000040089 Camsap1A2AHC3 1581 aa12.93□□□□□ -0.34
Rnf43-201ENSMUST00000040089 Ppp1r18Q8BQ30 594 aa12.93□□□□□ -0.34
Rnf43-201ENSMUST00000040089 Hspa5P20029 655 aaKnown RBP12.91□□□□□ -0.34
Rnf43-201ENSMUST00000040089 SafbD3YXK2 937 aaKnown RBP12.91□□□□□ -0.34
Rnf43-201ENSMUST00000040089 Mtus2Q3UHD3 1353 aa12.9□□□□□ -0.34
Rnf43-201ENSMUST00000040089 Grwd1Q810D6 446 aaKnown RBP12.9□□□□□ -0.34
Rnf43-201ENSMUST00000040089 Ccer2J3QPU5 274 aa12.89□□□□□ -0.35
Rnf43-201ENSMUST00000040089 Anp32aO35381 247 aa12.89□□□□□ -0.35
Rnf43-201ENSMUST00000040089 CntlnA2AM05 1397 aa12.89□□□□□ -0.35
Rnf43-201ENSMUST00000040089 NrkQ9R0G8 1455 aa12.89□□□□□ -0.35
Rnf43-201ENSMUST00000040089 Lamc3Q9R0B6 1581 aa12.88□□□□□ -0.35
Rnf43-201ENSMUST00000040089 Gm13695A2AK44 830 aa12.88□□□□□ -0.35
Rnf43-201ENSMUST00000040089 Jph4Q80WT0 628 aa12.86□□□□□ -0.35
Rnf43-201ENSMUST00000040089 Pabpn1Q8CCS6 302 aaKnown RBP12.86□□□□□ -0.35
Rnf43-201ENSMUST00000040089 Ccnb3Q810T2 1396 aa12.86□□□□□ -0.35
Rnf43-201ENSMUST00000040089 Fyco1Q8VDC1 1437 aa12.85□□□□□ -0.35
Rnf43-201ENSMUST00000040089 NrdcQ8BHG1 1161 aa12.85□□□□□ -0.35
Rnf43-201ENSMUST00000040089 Mroh2bQ7M6Y6 1581 aa12.84□□□□□ -0.35
Rnf43-201ENSMUST00000040089 Rtl5Q5DTT4 599 aa12.84□□□□□ -0.35
Rnf43-201ENSMUST00000040089 P3h3Q8CG70 732 aa12.84□□□□□ -0.35
Rnf43-201ENSMUST00000040089 Kdm2aP59997 1161 aa12.83□□□□□ -0.36
Rnf43-201ENSMUST00000040089 Safb2Q80YR5 991 aaKnown RBP12.83□□□□□ -0.36
Rnf43-201ENSMUST00000040089 Soga1E1U8D0 1418 aa12.83□□□□□ -0.36
Rnf43-201ENSMUST00000040089 Trak1Q6PD31 939 aa12.8□□□□□ -0.36
Rnf43-201ENSMUST00000040089 Arap1Q4LDD4 1452 aa12.8□□□□□ -0.36
Rnf43-201ENSMUST00000040089 Clstn2Q9ER65 966 aa12.8□□□□□ -0.36
Rnf43-201ENSMUST00000040089 Sart1Q9Z315 806 aaKnown RBP12.79□□□□□ -0.36
Rnf43-201ENSMUST00000040089 Stk24Q99KH8 431 aa12.78□□□□□ -0.36
Rnf43-201ENSMUST00000040089 Map4P27546 1125 aaKnown RBP12.78□□□□□ -0.36
Rnf43-201ENSMUST00000040089 Tdrd9Q14BI7 1383 aa12.77□□□□□ -0.36
Rnf43-201ENSMUST00000040089 Crocc2F6XLV1 1638 aa12.77□□□□□ -0.37
Rnf43-201ENSMUST00000040089 Pkd2O35245 966 aa12.76□□□□□ -0.37
Rnf43-201ENSMUST00000040089 CadpsQ80TJ1 1355 aa12.76□□□□□ -0.37
Rnf43-201ENSMUST00000040089 EprsQ8CGC7 1512 aaKnown RBP12.76□□□□□ -0.37
Rnf43-201ENSMUST00000040089 Thoc2B1AZI6 1594 aaKnown RBP12.76□□□□□ -0.37
Rnf43-201ENSMUST00000040089 Anp32bQ9EST5 272 aaKnown RBP12.75□□□□□ -0.37
Rnf43-201ENSMUST00000040089 Gm7298A0A0N4SVU1 1476 aa12.75□□□□□ -0.37
Rnf43-201ENSMUST00000040089 Lemd3Q9WU40 921 aa12.74□□□□□ -0.37
Rnf43-201ENSMUST00000040089 Mroh3A0A1D5RM54 893 aa12.74□□□□□ -0.37
Rnf43-201ENSMUST00000040089 Naip1Q9QWK5 1403 aa12.74□□□□□ -0.37
Rnf43-201ENSMUST00000040089 Fam135aQ6NS59 1506 aa12.73□□□□□ -0.37
Rnf43-201ENSMUST00000040089 Mphosph9A6H5Y1 991 aa12.73□□□□□ -0.37
Rnf43-201ENSMUST00000040089 MyclP10166 368 aa12.72□□□□□ -0.37
Rnf43-201ENSMUST00000040089 Arhgap31A6X8Z5 1425 aa12.72□□□□□ -0.37
Rnf43-201ENSMUST00000040089 Mia2Q91ZV0 1396 aa12.72□□□□□ -0.37
Rnf43-201ENSMUST00000040089 Zfp644E9QA22 1323 aa12.72□□□□□ -0.37
Rnf43-201ENSMUST00000040089 Sin3aQ60520 1274 aaKnown RBP12.72□□□□□ -0.37
Rnf43-201ENSMUST00000040089 Kif3bQ61771 747 aa12.72□□□□□ -0.37
Rnf43-201ENSMUST00000040089 Grin2aP35436 1464 aa12.7□□□□□ -0.38
Rnf43-201ENSMUST00000040089 Fgd6Q69ZL1 1399 aa12.69□□□□□ -0.38
Rnf43-201ENSMUST00000040089 Ift140E9PY46 1464 aa12.69□□□□□ -0.38
Rnf43-201ENSMUST00000040089 Cc2d2bA0A286YDU8 1405 aa12.69□□□□□ -0.38
Rnf43-201ENSMUST00000040089 Cux1P53564 1515 aa12.68□□□□□ -0.38
Rnf43-201ENSMUST00000040089 Calr4Q3TQS0 420 aa12.68□□□□□ -0.38
Rnf43-201ENSMUST00000040089 Mrs2Q5NCE8 434 aa12.68□□□□□ -0.38
Rnf43-201ENSMUST00000040089 AqrQ8CFQ3 1481 aaKnown RBP12.67□□□□□ -0.38
Rnf43-201ENSMUST00000040089 Map3k1P53349 1493 aa12.66□□□□□ -0.38
Rnf43-201ENSMUST00000040089 Ppp4r2Q0VGB7 417 aa12.66□□□□□ -0.38
Rnf43-201ENSMUST00000040089 SynmQ70IV5 1561 aa12.66□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 109.8 ms