RNA–Protein interactions for RNA: ENSMUST00000031894.12

Clcn1-201, Transcript of Chloride channel protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcn1, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1-201ENSMUST00000031894 Rapgef2Q8CHG7 1496 aa15.3■□□□□ 0.04
Clcn1-201ENSMUST00000031894 Eif4g3Q80XI3 1579 aaKnown RBP15.28■□□□□ 0.04
Clcn1-201ENSMUST00000031894 Grin2aP35436 1464 aa15.27■□□□□ 0.04
Clcn1-201ENSMUST00000031894 Fgd6Q69ZL1 1399 aa15.25■□□□□ 0.03
Clcn1-201ENSMUST00000031894 Clip1Q922J3 1391 aa15.25■□□□□ 0.03
Clcn1-201ENSMUST00000031894 Dnajc5P60904 198 aa15.24■□□□□ 0.03
Clcn1-201ENSMUST00000031894 Rpap1Q80TE0 1409 aa15.24■□□□□ 0.03
Clcn1-201ENSMUST00000031894 Csrnp3P59055 597 aa15.23■□□□□ 0.03
Clcn1-201ENSMUST00000031894 Cep162Q6ZQ06 1403 aa15.21■□□□□ 0.03
Clcn1-201ENSMUST00000031894 Gm38655A0A286YDK6 273 aa15.21■□□□□ 0.03
Clcn1-201ENSMUST00000031894 Rusc2Q80U22 1514 aa15.21■□□□□ 0.03
Clcn1-201ENSMUST00000031894 Nup160Q9Z0W3 1402 aaKnown RBP15.2■□□□□ 0.02
Clcn1-201ENSMUST00000031894 Carmil1Q6EDY6 1374 aa15.19■□□□□ 0.02
Clcn1-201ENSMUST00000031894 Lmod2Q3UHZ5 550 aa15.19■□□□□ 0.02
Clcn1-201ENSMUST00000031894 Sall2Q9QX96 1004 aa15.16■□□□□ 0.02
Clcn1-201ENSMUST00000031894 SynmQ70IV5 1561 aa15.16■□□□□ 0.02
Clcn1-201ENSMUST00000031894 Soga1E1U8D0 1418 aa15.16■□□□□ 0.02
Clcn1-201ENSMUST00000031894 Mroh2bQ7M6Y6 1581 aa15.16■□□□□ 0.02
Clcn1-201ENSMUST00000031894 Magi3Q9EQJ9 1476 aa15.15■□□□□ 0.02
Clcn1-201ENSMUST00000031894 1700123L14RikQ3V2K7 440 aa15.14■□□□□ 0.01
Clcn1-201ENSMUST00000031894 NefmP08553 848 aa15.13■□□□□ 0.01
Clcn1-201ENSMUST00000031894 Pla2r1Q62028 1487 aa15.13■□□□□ 0.01
Clcn1-201ENSMUST00000031894 AqrQ8CFQ3 1481 aaKnown RBP15.12■□□□□ 0.01
Clcn1-201ENSMUST00000031894 Arid3cA6PWV5 409 aa15.12■□□□□ 0.01
Clcn1-201ENSMUST00000031894 Mier1Q5UAK0 511 aa15.12■□□□□ 0.01
Clcn1-201ENSMUST00000031894 Arhgap35Q91YM2 1499 aa15.11■□□□□ 0.01
Clcn1-201ENSMUST00000031894 Setd5Q5XJV7 1441 aa15.11■□□□□ 0.01
Clcn1-201ENSMUST00000031894 EprsQ8CGC7 1512 aaKnown RBP15.11■□□□□ 0.01
Clcn1-201ENSMUST00000031894 CenpbP27790 599 aa15.11■□□□□ 0.01
Clcn1-201ENSMUST00000031894 Plppr3Q7TPB0 716 aa15.1■□□□□ 0.01
Clcn1-201ENSMUST00000031894 Ppp1r18Q8BQ30 594 aa15.09■□□□□ 0.01
Clcn1-201ENSMUST00000031894 Jph4Q80WT0 628 aa15.08■□□□□ 0.01
Clcn1-201ENSMUST00000031894 WrnO09053 1401 aa15.07■□□□□ 0
Clcn1-201ENSMUST00000031894 Gm156Q58A37 223 aa15.07■□□□□ 0
Clcn1-201ENSMUST00000031894 Neo1P97798 1493 aa15.07■□□□□ 0
Clcn1-201ENSMUST00000031894 CadpsQ80TJ1 1355 aa15.07■□□□□ 0
Clcn1-201ENSMUST00000031894 Shroom2A2ALU4 1481 aa15.06■□□□□ 0
Clcn1-201ENSMUST00000031894 Plekhg3Q4VAC9 1341 aa15.05■□□□□ -0
Clcn1-201ENSMUST00000031894 Aebp1Q640N1 1128 aa15.04■□□□□ -0
Clcn1-201ENSMUST00000031894 PxdnQ3UQ28 1475 aa15.04■□□□□ -0
Clcn1-201ENSMUST00000031894 Gm7298A0A0N4SVU1 1476 aa15.03■□□□□ -0
Clcn1-201ENSMUST00000031894 UbtfP25976 765 aaKnown RBP15.02■□□□□ -0
Clcn1-201ENSMUST00000031894 Cdk11bP24788 784 aaKnown RBP15.02□□□□□ -0.01
Clcn1-201ENSMUST00000031894 Gm14025A2AP89 1413 aa15.01□□□□□ -0.01
Clcn1-201ENSMUST00000031894 Ythdc2B2RR83 1445 aaKnown RBP15.01□□□□□ -0.01
Clcn1-201ENSMUST00000031894 TchhA0A0B4J1F9 1599 aa14.99□□□□□ -0.01
Clcn1-201ENSMUST00000031894 Gapvd1Q6PAR5 1458 aa14.99□□□□□ -0.01
Clcn1-201ENSMUST00000031894 Nop58Q6DFW4 536 aaKnown RBP14.98□□□□□ -0.01
Clcn1-201ENSMUST00000031894 Eea1Q8BL66 1411 aa14.97□□□□□ -0.01
Clcn1-201ENSMUST00000031894 Pbrm1Q8BSQ9 1634 aaKnown RBP14.97□□□□□ -0.01
Clcn1-201ENSMUST00000031894 WizO88286 1684 aaKnown RBP14.96□□□□□ -0.01
Clcn1-201ENSMUST00000031894 Abcc1O35379 1528 aa14.96□□□□□ -0.01
Clcn1-201ENSMUST00000031894 Map3k1P53349 1493 aa14.96□□□□□ -0.01
Clcn1-201ENSMUST00000031894 Kif27Q7M6Z4 1394 aa14.96□□□□□ -0.02
Clcn1-201ENSMUST00000031894 Fyco1Q8VDC1 1437 aa14.95□□□□□ -0.02
Clcn1-201ENSMUST00000031894 Anks4bQ8K3X6 423 aa14.93□□□□□ -0.02
Clcn1-201ENSMUST00000031894 Cux1P53564 1515 aa14.91□□□□□ -0.02
Clcn1-201ENSMUST00000031894 Setd1bQ8CFT2 1985 aa14.91□□□□□ -0.02
Clcn1-201ENSMUST00000031894 Col17a1Q07563 1470 aa14.9□□□□□ -0.02
Clcn1-201ENSMUST00000031894 Polr1aO35134 1717 aaKnown RBP14.88□□□□□ -0.03
Clcn1-201ENSMUST00000031894 BlmO88700 1416 aa14.88□□□□□ -0.03
Clcn1-201ENSMUST00000031894 Adgrl3Q80TS3 1537 aa14.88□□□□□ -0.03
Clcn1-201ENSMUST00000031894 Arhgap31A6X8Z5 1425 aa14.87□□□□□ -0.03
Clcn1-201ENSMUST00000031894 PtprtQ99M80 1454 aa14.81□□□□□ -0.04
Clcn1-201ENSMUST00000031894 Cep170Q6A065 1588 aa14.81□□□□□ -0.04
Clcn1-201ENSMUST00000031894 Adamts12Q811B3 1600 aa14.81□□□□□ -0.04
Clcn1-201ENSMUST00000031894 Abcc2Q8VI47 1543 aa14.8□□□□□ -0.04
Clcn1-201ENSMUST00000031894 DiexfQ8BTT6 772 aaKnown RBP14.8□□□□□ -0.04
Clcn1-201ENSMUST00000031894 Abca16E9PWJ7 1678 aa14.79□□□□□ -0.04
Clcn1-201ENSMUST00000031894 Pcdh10E9PXQ7 1057 aa14.78□□□□□ -0.04
Clcn1-201ENSMUST00000031894 Ube2uB1AUC4 352 aa14.78□□□□□ -0.04
Clcn1-201ENSMUST00000031894 Aebp2Q9Z248 504 aaKnown RBP14.77□□□□□ -0.04
Clcn1-201ENSMUST00000031894 Gpatch8A2A6A1 1505 aa14.77□□□□□ -0.05
Clcn1-201ENSMUST00000031894 Fam50aQ9WV03 339 aaKnown RBP14.75□□□□□ -0.05
Clcn1-201ENSMUST00000031894 Myt1Q8CFC2 1127 aa14.75□□□□□ -0.05
Clcn1-201ENSMUST00000031894 Zbtb7cQ8VCZ7 619 aa14.75□□□□□ -0.05
Clcn1-201ENSMUST00000031894 Slx4Q6P1D7 1565 aa14.74□□□□□ -0.05
Clcn1-201ENSMUST00000031894 Arhgef12Q8R4H2 1543 aaKnown RBP14.74□□□□□ -0.05
Clcn1-201ENSMUST00000031894 Dnmt1P13864 1620 aaKnown RBP14.73□□□□□ -0.05
Clcn1-201ENSMUST00000031894 Igf1rQ60751 1373 aa14.73□□□□□ -0.05
Clcn1-201ENSMUST00000031894 CntlnA2AM05 1397 aa14.73□□□□□ -0.05
Clcn1-201ENSMUST00000031894 Map3k4O08648 1597 aa14.73□□□□□ -0.05
Clcn1-201ENSMUST00000031894 Ccdc141E9Q8Q6 1531 aa14.72□□□□□ -0.05
Clcn1-201ENSMUST00000031894 Eif4g1Q6NZJ6 1600 aaKnown RBP14.72□□□□□ -0.05
Clcn1-201ENSMUST00000031894 BC005561E9Q5E2 1589 aa14.71□□□□□ -0.05
Clcn1-201ENSMUST00000031894 Ankrd26Q811D2 1581 aa14.7□□□□□ -0.06
Clcn1-201ENSMUST00000031894 Aplp2Q06335 707 aa14.7□□□□□ -0.06
Clcn1-201ENSMUST00000031894 Arap1Q4LDD4 1452 aa14.69□□□□□ -0.06
Clcn1-201ENSMUST00000031894 Mapk8ip2Q9ERE9 830 aa14.68□□□□□ -0.06
Clcn1-201ENSMUST00000031894 Ncoa2Q61026 1462 aa14.68□□□□□ -0.06
Clcn1-201ENSMUST00000031894 AI481877A2ALV5 1481 aa14.67□□□□□ -0.06
Clcn1-201ENSMUST00000031894 Zcchc11B2RX14 1644 aaKnown RBP14.66□□□□□ -0.06
Clcn1-201ENSMUST00000031894 Atp10dQ8K2X1 1416 aa14.65□□□□□ -0.06
Clcn1-201ENSMUST00000031894 Chic2Q9D9G3 165 aa14.65□□□□□ -0.06
Clcn1-201ENSMUST00000031894 Arhgef5E9Q7D5 1581 aa14.65□□□□□ -0.06
Clcn1-201ENSMUST00000031894 Abca5Q8K448 1642 aa14.63□□□□□ -0.07
Clcn1-201ENSMUST00000031894 Dhx57Q6P5D3 1388 aaKnown RBP14.63□□□□□ -0.07
Clcn1-201ENSMUST00000031894 Znf608Q56A10 1511 aa14.62□□□□□ -0.07
Clcn1-201ENSMUST00000031894 Lemd3Q9WU40 921 aa14.61□□□□□ -0.07
Clcn1-201ENSMUST00000031894 Pcf11G3X9Z4 1553 aa14.61□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms