RNA–Protein interactions for RNA: ENSMUST00000031817.9

Herc6-201, Transcript of E3 ISG15--protein ligase Herc6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Herc6, Length 4,767 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc6-201ENSMUST00000031817 Synj1Q8CHC4 1574 aa14.57□□□□□ -0.08
Herc6-201ENSMUST00000031817 Cttnbp2B9EJA2 1648 aa14.53□□□□□ -0.08
Herc6-201ENSMUST00000031817 Plppr3Q7TPB0 716 aa14.52□□□□□ -0.09
Herc6-201ENSMUST00000031817 Sall2Q9QX96 1004 aa14.5□□□□□ -0.09
Herc6-201ENSMUST00000031817 Mtus2Q3UHD3 1353 aa14.49□□□□□ -0.09
Herc6-201ENSMUST00000031817 Mia2Q91ZV0 1396 aa14.49□□□□□ -0.09
Herc6-201ENSMUST00000031817 Safb2Q80YR5 991 aaKnown RBP14.49□□□□□ -0.09
Herc6-201ENSMUST00000031817 Mapk8ip2Q9ERE9 830 aa14.48□□□□□ -0.09
Herc6-201ENSMUST00000031817 Kif27Q7M6Z4 1394 aa14.47□□□□□ -0.09
Herc6-201ENSMUST00000031817 Prdm10Q3UTQ7 1184 aa14.44□□□□□ -0.1
Herc6-201ENSMUST00000031817 Iqgap2Q3UQ44 1575 aa14.43□□□□□ -0.1
Herc6-201ENSMUST00000031817 Baz1bQ9Z277 1479 aa14.42□□□□□ -0.1
Herc6-201ENSMUST00000031817 Aebp1Q640N1 1128 aa14.41□□□□□ -0.1
Herc6-201ENSMUST00000031817 Rgl3Q3UYI5 709 aa14.41□□□□□ -0.1
Herc6-201ENSMUST00000031817 Carmil1Q6EDY6 1374 aa14.4□□□□□ -0.1
Herc6-201ENSMUST00000031817 LrpprcQ6PB66 1392 aaKnown RBP14.39□□□□□ -0.11
Herc6-201ENSMUST00000031817 Rrp7aQ9D1C9 280 aaKnown RBP14.39□□□□□ -0.11
Herc6-201ENSMUST00000031817 CntlnA2AM05 1397 aa14.38□□□□□ -0.11
Herc6-201ENSMUST00000031817 Rpap1Q80TE0 1409 aa14.37□□□□□ -0.11
Herc6-201ENSMUST00000031817 Fyco1Q8VDC1 1437 aa14.36□□□□□ -0.11
Herc6-201ENSMUST00000031817 AknaQ80VW7 1404 aa14.36□□□□□ -0.11
Herc6-201ENSMUST00000031817 Upf2A2AT37 1269 aaKnown RBP14.34□□□□□ -0.11
Herc6-201ENSMUST00000031817 Mroh3A0A1D5RM54 893 aa14.32□□□□□ -0.12
Herc6-201ENSMUST00000031817 Dhx57Q6P5D3 1388 aaKnown RBP14.31□□□□□ -0.12
Herc6-201ENSMUST00000031817 Mrs2Q5NCE8 434 aa14.31□□□□□ -0.12
Herc6-201ENSMUST00000031817 Rtl5Q5DTT4 599 aa14.3□□□□□ -0.12
Herc6-201ENSMUST00000031817 Dhx29Q6PGC1 1365 aaKnown RBP14.3□□□□□ -0.12
Herc6-201ENSMUST00000031817 Cwc22Q8C5N3 908 aaKnown RBP14.3□□□□□ -0.12
Herc6-201ENSMUST00000031817 P3h3Q8CG70 732 aa14.3□□□□□ -0.12
Herc6-201ENSMUST00000031817 IqubQ8CDK3 788 aa14.3□□□□□ -0.12
Herc6-201ENSMUST00000031817 Polr3glQ8R0C0 218 aa14.29□□□□□ -0.12
Herc6-201ENSMUST00000031817 Rapgef2Q8CHG7 1496 aa14.29□□□□□ -0.12
Herc6-201ENSMUST00000031817 Srpk2O54781 681 aaKnown RBP14.28□□□□□ -0.12
Herc6-201ENSMUST00000031817 Myt1Q8CFC2 1127 aa14.28□□□□□ -0.12
Herc6-201ENSMUST00000031817 Anp32aO35381 247 aa14.28□□□□□ -0.12
Herc6-201ENSMUST00000031817 Amer1Q7TS75 1132 aa14.27□□□□□ -0.13
Herc6-201ENSMUST00000031817 Card11Q8CIS0 1159 aa14.26□□□□□ -0.13
Herc6-201ENSMUST00000031817 Arhgap35Q91YM2 1499 aa14.25□□□□□ -0.13
Herc6-201ENSMUST00000031817 Grwd1Q810D6 446 aaKnown RBP14.25□□□□□ -0.13
Herc6-201ENSMUST00000031817 Kdm2aP59997 1161 aa14.24□□□□□ -0.13
Herc6-201ENSMUST00000031817 Anks4bQ8K3X6 423 aa14.24□□□□□ -0.13
Herc6-201ENSMUST00000031817 4933416C03RikQ3V063 378 aa14.23□□□□□ -0.13
Herc6-201ENSMUST00000031817 Gm20521D3Z5F7 333 aa14.22□□□□□ -0.13
Herc6-201ENSMUST00000031817 Map4P27546 1125 aaKnown RBP14.22□□□□□ -0.13
Herc6-201ENSMUST00000031817 Ppp1r18Q8BQ30 594 aa14.2□□□□□ -0.14
Herc6-201ENSMUST00000031817 Lemd3Q9WU40 921 aa14.19□□□□□ -0.14
Herc6-201ENSMUST00000031817 Arid3cA6PWV5 409 aa14.18□□□□□ -0.14
Herc6-201ENSMUST00000031817 Efcab5A0JP43 1406 aa14.17□□□□□ -0.14
Herc6-201ENSMUST00000031817 Pkd2O35245 966 aa14.16□□□□□ -0.14
Herc6-201ENSMUST00000031817 Stk24Q99KH8 431 aa14.16□□□□□ -0.14
Herc6-201ENSMUST00000031817 Rad21Q61550 635 aaKnown RBP14.16□□□□□ -0.14
Herc6-201ENSMUST00000031817 Cabp1Q9JLK7 227 aa14.16□□□□□ -0.14
Herc6-201ENSMUST00000031817 Aebp2Q9Z248 504 aaKnown RBP14.16□□□□□ -0.14
Herc6-201ENSMUST00000031817 Exosc9Q9JHI7 438 aaKnown RBP14.14□□□□□ -0.15
Herc6-201ENSMUST00000031817 Hspa5P20029 655 aaKnown RBP14.13□□□□□ -0.15
Herc6-201ENSMUST00000031817 Calr4Q3TQS0 420 aa14.13□□□□□ -0.15
Herc6-201ENSMUST00000031817 Plekhh2Q8C115 1491 aa14.12□□□□□ -0.15
Herc6-201ENSMUST00000031817 Shroom4Q1W617 1475 aa14.11□□□□□ -0.15
Herc6-201ENSMUST00000031817 Mphosph9A6H5Y1 991 aa14.09□□□□□ -0.15
Herc6-201ENSMUST00000031817 Ccnb3Q810T2 1396 aa14.09□□□□□ -0.15
Herc6-201ENSMUST00000031817 Stag3O70576 1240 aa14.09□□□□□ -0.15
Herc6-201ENSMUST00000031817 UacaQ8CGB3 1411 aa14.08□□□□□ -0.15
Herc6-201ENSMUST00000031817 DiexfQ8BTT6 772 aaKnown RBP14.08□□□□□ -0.16
Herc6-201ENSMUST00000031817 Rsph4aQ8BYM7 716 aa14.08□□□□□ -0.16
Herc6-201ENSMUST00000031817 Top2aQ01320 1528 aaKnown RBP14.07□□□□□ -0.16
Herc6-201ENSMUST00000031817 WrnO09053 1401 aa14.07□□□□□ -0.16
Herc6-201ENSMUST00000031817 Trak1Q6PD31 939 aa14.07□□□□□ -0.16
Herc6-201ENSMUST00000031817 Zfp777B9EKF4 885 aa14.06□□□□□ -0.16
Herc6-201ENSMUST00000031817 Polr1aO35134 1717 aaKnown RBP14.06□□□□□ -0.16
Herc6-201ENSMUST00000031817 NrkQ9R0G8 1455 aa14.05□□□□□ -0.16
Herc6-201ENSMUST00000031817 MyclP10166 368 aa14.05□□□□□ -0.16
Herc6-201ENSMUST00000031817 Nup155Q99P88 1391 aaKnown RBP14.05□□□□□ -0.16
Herc6-201ENSMUST00000031817 Cc2d2aQ8CFW7 1633 aa14.04□□□□□ -0.16
Herc6-201ENSMUST00000031817 Csrnp3P59055 597 aa14.04□□□□□ -0.16
Herc6-201ENSMUST00000031817 Frmpd1A2AKB4 1549 aa14.04□□□□□ -0.16
Herc6-201ENSMUST00000031817 BicraF8VPZ9 1578 aa14.04□□□□□ -0.16
Herc6-201ENSMUST00000031817 Ncoa2Q61026 1462 aa14.04□□□□□ -0.16
Herc6-201ENSMUST00000031817 Pabpn1Q8CCS6 302 aaKnown RBP14.02□□□□□ -0.16
Herc6-201ENSMUST00000031817 Ofd1Q80Z25 1017 aa14.02□□□□□ -0.17
Herc6-201ENSMUST00000031817 Jph4Q80WT0 628 aa14.02□□□□□ -0.17
Herc6-201ENSMUST00000031817 Sart1Q9Z315 806 aaKnown RBP14.02□□□□□ -0.17
Herc6-201ENSMUST00000031817 Mrc2Q64449 1479 aa14.01□□□□□ -0.17
Herc6-201ENSMUST00000031817 Soga1E1U8D0 1418 aa14.01□□□□□ -0.17
Herc6-201ENSMUST00000031817 Rundc1Q0VDN7 615 aa14□□□□□ -0.17
Herc6-201ENSMUST00000031817 Duox2A2AQ99 1517 aa14□□□□□ -0.17
Herc6-201ENSMUST00000031817 Fhad1A6PWD2 1420 aa14□□□□□ -0.17
Herc6-201ENSMUST00000031817 Urb2E9Q7L1 1524 aaKnown RBP14□□□□□ -0.17
Herc6-201ENSMUST00000031817 Kif3bQ61771 747 aa13.99□□□□□ -0.17
Herc6-201ENSMUST00000031817 Rangap1P46061 589 aaKnown RBP13.98□□□□□ -0.17
Herc6-201ENSMUST00000031817 Ifit1bl1D3Z6F0 470 aa13.98□□□□□ -0.17
Herc6-201ENSMUST00000031817 Aplp2Q06335 707 aa13.98□□□□□ -0.17
Herc6-201ENSMUST00000031817 Arid4bA2CG63 1314 aaKnown RBP13.98□□□□□ -0.17
Herc6-201ENSMUST00000031817 Mapk8ip3Q9ESN9 1337 aa13.98□□□□□ -0.17
Herc6-201ENSMUST00000031817 Cux1P53564 1515 aa13.97□□□□□ -0.17
Herc6-201ENSMUST00000031817 Wdr43Q6ZQL4 677 aaKnown RBP13.97□□□□□ -0.17
Herc6-201ENSMUST00000031817 Gtf2e1Q9D0D5 440 aa13.97□□□□□ -0.17
Herc6-201ENSMUST00000031817 PogzQ8BZH4 1409 aaKnown RBP13.97□□□□□ -0.17
Herc6-201ENSMUST00000031817 Ppp4r2Q0VGB7 417 aa13.97□□□□□ -0.17
Herc6-201ENSMUST00000031817 Fgd1P52734 960 aa13.96□□□□□ -0.17
Herc6-201ENSMUST00000031817 Grin2bQ01097 1482 aa13.95□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms