RNA–Protein interactions for RNA: ENSMUST00000031377.8

Scarb2-201, Transcript of Lysosome membrane protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scarb2, Length 4,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2-201ENSMUST00000031377 Rtl5Q5DTT4 599 aa18.57■□□□□ 0.56
Scarb2-201ENSMUST00000031377 DiexfQ8BTT6 772 aaKnown RBP18.55■□□□□ 0.56
Scarb2-201ENSMUST00000031377 Fmn1Q05860 1466 aa18.51■□□□□ 0.55
Scarb2-201ENSMUST00000031377 Fkbp15Q6P9Q6 1216 aaKnown RBP18.5■□□□□ 0.55
Scarb2-201ENSMUST00000031377 Hspa5P20029 655 aaKnown RBP18.49■□□□□ 0.55
Scarb2-201ENSMUST00000031377 Rapgef2Q8CHG7 1496 aa18.48■□□□□ 0.55
Scarb2-201ENSMUST00000031377 P3h3Q8CG70 732 aa18.47■□□□□ 0.55
Scarb2-201ENSMUST00000031377 Wdr43Q6ZQL4 677 aaKnown RBP18.44■□□□□ 0.54
Scarb2-201ENSMUST00000031377 Prdm10Q3UTQ7 1184 aa18.39■□□□□ 0.53
Scarb2-201ENSMUST00000031377 Sin3aQ60520 1274 aaKnown RBP18.35■□□□□ 0.53
Scarb2-201ENSMUST00000031377 Ifnlr1Q8CGK5 535 aa18.35■□□□□ 0.53
Scarb2-201ENSMUST00000031377 Erich6D3Z6S9 713 aa18.34■□□□□ 0.53
Scarb2-201ENSMUST00000031377 Rgl3Q3UYI5 709 aa18.32■□□□□ 0.52
Scarb2-201ENSMUST00000031377 Rad21Q61550 635 aaKnown RBP18.32■□□□□ 0.52
Scarb2-201ENSMUST00000031377 DaxxO35613 739 aa18.32■□□□□ 0.52
Scarb2-201ENSMUST00000031377 Ccdc18Q640L5 1455 aa18.29■□□□□ 0.52
Scarb2-201ENSMUST00000031377 Gm13697A2AK42 830 aa18.26■□□□□ 0.51
Scarb2-201ENSMUST00000031377 Wwc2Q6NXJ0 1187 aa18.24■□□□□ 0.51
Scarb2-201ENSMUST00000031377 Baz1bQ9Z277 1479 aa18.21■□□□□ 0.51
Scarb2-201ENSMUST00000031377 Grwd1Q810D6 446 aaKnown RBP18.2■□□□□ 0.5
Scarb2-201ENSMUST00000031377 ArxO35085 564 aa18.2■□□□□ 0.5
Scarb2-201ENSMUST00000031377 Ofd1Q80Z25 1017 aa18.19■□□□□ 0.5
Scarb2-201ENSMUST00000031377 Mia2Q91ZV0 1396 aa18.18■□□□□ 0.5
Scarb2-201ENSMUST00000031377 Nlrp6Q91WS2 869 aa18.17■□□□□ 0.5
Scarb2-201ENSMUST00000031377 Ercc6F8VPZ5 1481 aa18.15■□□□□ 0.5
Scarb2-201ENSMUST00000031377 Polr3glQ8R0C0 218 aa18.15■□□□□ 0.5
Scarb2-201ENSMUST00000031377 Cttnbp2B9EJA2 1648 aa18.15■□□□□ 0.5
Scarb2-201ENSMUST00000031377 Aebp1Q640N1 1128 aa18.14■□□□□ 0.49
Scarb2-201ENSMUST00000031377 Slc4a3P16283 1227 aa18.13■□□□□ 0.49
Scarb2-201ENSMUST00000031377 Cc2d2aQ8CFW7 1633 aa18.11■□□□□ 0.49
Scarb2-201ENSMUST00000031377 Smarca4Q3TKT4 1613 aaKnown RBP18.11■□□□□ 0.49
Scarb2-201ENSMUST00000031377 Pds5bQ4VA53 1446 aaKnown RBP18.07■□□□□ 0.48
Scarb2-201ENSMUST00000031377 Card11Q8CIS0 1159 aa18.06■□□□□ 0.48
Scarb2-201ENSMUST00000031377 Pkd2O35245 966 aa18.05■□□□□ 0.48
Scarb2-201ENSMUST00000031377 Exoc6Q8R313 802 aa18.05■□□□□ 0.48
Scarb2-201ENSMUST00000031377 Arhgap27A2AB59 869 aa18.04■□□□□ 0.48
Scarb2-201ENSMUST00000031377 Fyco1Q8VDC1 1437 aa18.03■□□□□ 0.48
Scarb2-201ENSMUST00000031377 Arhgap35Q91YM2 1499 aa18.03■□□□□ 0.48
Scarb2-201ENSMUST00000031377 Rangap1P46061 589 aaKnown RBP18.02■□□□□ 0.48
Scarb2-201ENSMUST00000031377 Cabp1Q9JLK7 227 aa18.01■□□□□ 0.47
Scarb2-201ENSMUST00000031377 Nolc1E9Q5C9 702 aaKnown RBP18.01■□□□□ 0.47
Scarb2-201ENSMUST00000031377 Upf2A2AT37 1269 aaKnown RBP18.01■□□□□ 0.47
Scarb2-201ENSMUST00000031377 Mphosph9A6H5Y1 991 aa18■□□□□ 0.47
Scarb2-201ENSMUST00000031377 CntlnA2AM05 1397 aa18■□□□□ 0.47
Scarb2-201ENSMUST00000031377 Supt16hQ920B9 1047 aa17.99■□□□□ 0.47
Scarb2-201ENSMUST00000031377 Kif27Q7M6Z4 1394 aa17.98■□□□□ 0.47
Scarb2-201ENSMUST00000031377 Top2aQ01320 1528 aaKnown RBP17.98■□□□□ 0.47
Scarb2-201ENSMUST00000031377 Bcl11aQ9QYE3 773 aa17.98■□□□□ 0.47
Scarb2-201ENSMUST00000031377 Mtus2Q3UHD3 1353 aa17.97■□□□□ 0.47
Scarb2-201ENSMUST00000031377 Atp1b4Q99ME6 356 aa17.97■□□□□ 0.47
Scarb2-201ENSMUST00000031377 Cwc22Q8C5N3 908 aaKnown RBP17.95■□□□□ 0.46
Scarb2-201ENSMUST00000031377 Apbb1Q9QXJ1 710 aa17.95■□□□□ 0.46
Scarb2-201ENSMUST00000031377 Atad2bE9Q166 1460 aaKnown RBP17.94■□□□□ 0.46
Scarb2-201ENSMUST00000031377 Ncapd3Q6ZQK0 1506 aa17.92■□□□□ 0.46
Scarb2-201ENSMUST00000031377 Clstn2Q9ER65 966 aa17.92■□□□□ 0.46
Scarb2-201ENSMUST00000031377 Cux2P70298 1426 aa17.92■□□□□ 0.46
Scarb2-201ENSMUST00000031377 Rundc1Q0VDN7 615 aa17.92■□□□□ 0.46
Scarb2-201ENSMUST00000031377 Kdm2aP59997 1161 aa17.92■□□□□ 0.46
Scarb2-201ENSMUST00000031377 CanxP35564 591 aaKnown RBP17.9■□□□□ 0.46
Scarb2-201ENSMUST00000031377 Iqgap2Q3UQ44 1575 aa17.89■□□□□ 0.45
Scarb2-201ENSMUST00000031377 Carmil1Q6EDY6 1374 aa17.88■□□□□ 0.45
Scarb2-201ENSMUST00000031377 Arap1Q4LDD4 1452 aa17.87■□□□□ 0.45
Scarb2-201ENSMUST00000031377 Znf710Q3U288 666 aa17.87■□□□□ 0.45
Scarb2-201ENSMUST00000031377 Rrp7aQ9D1C9 280 aaKnown RBP17.87■□□□□ 0.45
Scarb2-201ENSMUST00000031377 Trak1Q6PD31 939 aa17.87■□□□□ 0.45
Scarb2-201ENSMUST00000031377 Smg6P61406 1418 aaKnown RBP17.87■□□□□ 0.45
Scarb2-201ENSMUST00000031377 Hsp90aa1P07901 733 aaKnown RBP17.87■□□□□ 0.45
Scarb2-201ENSMUST00000031377 Ccnb3Q810T2 1396 aa17.86■□□□□ 0.45
Scarb2-201ENSMUST00000031377 Rpap1Q80TE0 1409 aa17.85■□□□□ 0.45
Scarb2-201ENSMUST00000031377 Dbr1Q923B1 550 aa17.85■□□□□ 0.45
Scarb2-201ENSMUST00000031377 Trim26Q99PN3 545 aa17.85■□□□□ 0.45
Scarb2-201ENSMUST00000031377 Neurod2Q62414 383 aa17.83■□□□□ 0.45
Scarb2-201ENSMUST00000031377 B4galnt3Q6L8S8 986 aa17.83■□□□□ 0.45
Scarb2-201ENSMUST00000031377 Ccdc27Q3V036 639 aa17.82■□□□□ 0.44
Scarb2-201ENSMUST00000031377 Mroh3A0A1D5RM54 893 aa17.82■□□□□ 0.44
Scarb2-201ENSMUST00000031377 Gm13695A2AK44 830 aa17.82■□□□□ 0.44
Scarb2-201ENSMUST00000031377 Trim30dE9PWL0 497 aa17.82■□□□□ 0.44
Scarb2-201ENSMUST00000031377 PtprkP35822 1457 aa17.81■□□□□ 0.44
Scarb2-201ENSMUST00000031377 Top2bQ64511 1612 aa17.81■□□□□ 0.44
Scarb2-201ENSMUST00000031377 Hdac5Q9Z2V6 1113 aa17.8■□□□□ 0.44
Scarb2-201ENSMUST00000031377 Map4P27546 1125 aaKnown RBP17.79■□□□□ 0.44
Scarb2-201ENSMUST00000031377 Naip1Q9QWK5 1403 aa17.79■□□□□ 0.44
Scarb2-201ENSMUST00000031377 Tcerg1Q8CGF7 1100 aaKnown RBP17.76■□□□□ 0.43
Scarb2-201ENSMUST00000031377 Shroom4Q1W617 1475 aa17.75■□□□□ 0.43
Scarb2-201ENSMUST00000031377 Usp47Q8BY87 1376 aa17.75■□□□□ 0.43
Scarb2-201ENSMUST00000031377 BicraF8VPZ9 1578 aa17.74■□□□□ 0.43
Scarb2-201ENSMUST00000031377 LrpprcQ6PB66 1392 aaKnown RBP17.74■□□□□ 0.43
Scarb2-201ENSMUST00000031377 Hsp90ab1P11499 724 aaKnown RBP17.71■□□□□ 0.43
Scarb2-201ENSMUST00000031377 Arhgef5E9Q7D5 1581 aa17.69■□□□□ 0.42
Scarb2-201ENSMUST00000031377 Fhad1A6PWD2 1420 aa17.69■□□□□ 0.42
Scarb2-201ENSMUST00000031377 Zscan21Q07231 555 aa17.68■□□□□ 0.42
Scarb2-201ENSMUST00000031377 Gm20521D3Z5F7 333 aa17.68■□□□□ 0.42
Scarb2-201ENSMUST00000031377 Ifit1bl1D3Z6F0 470 aa17.68■□□□□ 0.42
Scarb2-201ENSMUST00000031377 Zfp644E9QA22 1323 aa17.68■□□□□ 0.42
Scarb2-201ENSMUST00000031377 Phldb1Q6PDH0 1371 aaKnown RBP17.67■□□□□ 0.42
Scarb2-201ENSMUST00000031377 Armcx1Q9CX83 456 aa17.66■□□□□ 0.42
Scarb2-201ENSMUST00000031377 Cnga1P29974 684 aa17.65■□□□□ 0.42
Scarb2-201ENSMUST00000031377 UacaQ8CGB3 1411 aa17.64■□□□□ 0.41
Scarb2-201ENSMUST00000031377 4930567H17RikQ3V0K5 233 aa17.64■□□□□ 0.41
Scarb2-201ENSMUST00000031377 Stk24Q99KH8 431 aa17.64■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 1016 ms