RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 Npm1Q61937 292 aaKnown RBP29.06■■■□□ 2.24
Ccdc34-201ENSMUST00000028580 Efcab5A0JP43 1406 aa29.06■■■□□ 2.24
Ccdc34-201ENSMUST00000028580 LrpprcQ6PB66 1392 aaKnown RBP28.98■■■□□ 2.23
Ccdc34-201ENSMUST00000028580 Pcf11G3X9Z4 1553 aa28.97■■■□□ 2.23
Ccdc34-201ENSMUST00000028580 Carmil1Q6EDY6 1374 aa28.96■■■□□ 2.23
Ccdc34-201ENSMUST00000028580 Anks4bQ8K3X6 423 aa28.95■■■□□ 2.23
Ccdc34-201ENSMUST00000028580 Ap3b1Q9Z1T1 1105 aa28.95■■■□□ 2.23
Ccdc34-201ENSMUST00000028580 Lmo7E9PYF4 1699 aaKnown RBP28.95■■■□□ 2.22
Ccdc34-201ENSMUST00000028580 PogzQ8BZH4 1409 aaKnown RBP28.94■■■□□ 2.22
Ccdc34-201ENSMUST00000028580 Mrc2Q64449 1479 aa28.92■■■□□ 2.22
Ccdc34-201ENSMUST00000028580 Slx4Q6P1D7 1565 aa28.9■■■□□ 2.22
Ccdc34-201ENSMUST00000028580 BlmO88700 1416 aa28.87■■■□□ 2.21
Ccdc34-201ENSMUST00000028580 CntlnA2AM05 1397 aa28.87■■■□□ 2.21
Ccdc34-201ENSMUST00000028580 Duox2A2AQ99 1517 aa28.86■■■□□ 2.21
Ccdc34-201ENSMUST00000028580 Cux1P53564 1515 aa28.85■■■□□ 2.21
Ccdc34-201ENSMUST00000028580 Peg3Q3URU2 1571 aa28.84■■■□□ 2.21
Ccdc34-201ENSMUST00000028580 Dnajc5bQ9CQ94 199 aa28.84■■■□□ 2.21
Ccdc34-201ENSMUST00000028580 Kif21aQ9QXL2 1672 aa28.8■■■□□ 2.2
Ccdc34-201ENSMUST00000028580 Cdk11bP24788 784 aaKnown RBP28.78■■■□□ 2.2
Ccdc34-201ENSMUST00000028580 Nop58Q6DFW4 536 aaKnown RBP28.78■■■□□ 2.2
Ccdc34-201ENSMUST00000028580 Urb2E9Q7L1 1524 aaKnown RBP28.77■■■□□ 2.2
Ccdc34-201ENSMUST00000028580 Dhx29Q6PGC1 1365 aaKnown RBP28.77■■■□□ 2.2
Ccdc34-201ENSMUST00000028580 SynmQ70IV5 1561 aa28.74■■■□□ 2.19
Ccdc34-201ENSMUST00000028580 Fyco1Q8VDC1 1437 aa28.72■■■□□ 2.19
Ccdc34-201ENSMUST00000028580 Crocc2F6XLV1 1638 aa28.72■■■□□ 2.19
Ccdc34-201ENSMUST00000028580 Samd9lQ69Z37 1561 aa28.69■■■□□ 2.18
Ccdc34-201ENSMUST00000028580 Polr1aO35134 1717 aaKnown RBP28.67■■■□□ 2.18
Ccdc34-201ENSMUST00000028580 Rpap1Q80TE0 1409 aa28.67■■■□□ 2.18
Ccdc34-201ENSMUST00000028580 3425401B19RikD3Z1D3 1412 aa28.64■■■□□ 2.18
Ccdc34-201ENSMUST00000028580 Eid3Q3V124 375 aa28.6■■■□□ 2.17
Ccdc34-201ENSMUST00000028580 Fhad1A6PWD2 1420 aa28.59■■■□□ 2.17
Ccdc34-201ENSMUST00000028580 Gm1043A0A140LJC2 1431 aa28.57■■■□□ 2.16
Ccdc34-201ENSMUST00000028580 Mia2Q91ZV0 1396 aa28.56■■■□□ 2.16
Ccdc34-201ENSMUST00000028580 Ppargc1bQ8VHJ7 1014 aa28.55■■■□□ 2.16
Ccdc34-201ENSMUST00000028580 Ankrd36D3Z4K0 1415 aa28.52■■■□□ 2.16
Ccdc34-201ENSMUST00000028580 Aebp1Q640N1 1128 aa28.52■■■□□ 2.16
Ccdc34-201ENSMUST00000028580 Vps8Q0P5W1 1427 aa28.51■■■□□ 2.15
Ccdc34-201ENSMUST00000028580 Ccer2J3QPU5 274 aa28.5■■■□□ 2.15
Ccdc34-201ENSMUST00000028580 UacaQ8CGB3 1411 aa28.47■■■□□ 2.15
Ccdc34-201ENSMUST00000028580 Lmod2Q3UHZ5 550 aa28.46■■■□□ 2.15
Ccdc34-201ENSMUST00000028580 Gm7298A0A0N4SVU1 1476 aa28.45■■■□□ 2.14
Ccdc34-201ENSMUST00000028580 Naip2Q9QUK4 1447 aa28.44■■■□□ 2.14
Ccdc34-201ENSMUST00000028580 Rad54l2Q99NG0 1466 aa28.44■■■□□ 2.14
Ccdc34-201ENSMUST00000028580 Fam50aQ9WV03 339 aaKnown RBP28.43■■■□□ 2.14
Ccdc34-201ENSMUST00000028580 EprsQ8CGC7 1512 aaKnown RBP28.38■■■□□ 2.13
Ccdc34-201ENSMUST00000028580 Plb1Q3TTY0 1478 aa28.38■■■□□ 2.13
Ccdc34-201ENSMUST00000028580 Pla2r1Q62028 1487 aa28.37■■■□□ 2.13
Ccdc34-201ENSMUST00000028580 Lmtk2Q3TYD6 1471 aa28.36■■■□□ 2.13
Ccdc34-201ENSMUST00000028580 Csrnp3P59055 597 aa28.36■■■□□ 2.13
Ccdc34-201ENSMUST00000028580 Magi3Q9EQJ9 1476 aa28.32■■■□□ 2.12
Ccdc34-201ENSMUST00000028580 Abca5Q8K448 1642 aa28.32■■■□□ 2.12
Ccdc34-201ENSMUST00000028580 A2mQ6GQT1 1474 aa28.3■■■□□ 2.12
Ccdc34-201ENSMUST00000028580 CadpsQ80TJ1 1355 aa28.29■■■□□ 2.12
Ccdc34-201ENSMUST00000028580 Pbrm1Q8BSQ9 1634 aaKnown RBP28.27■■■□□ 2.12
Ccdc34-201ENSMUST00000028580 Gpatch8A2A6A1 1505 aa28.27■■■□□ 2.12
Ccdc34-201ENSMUST00000028580 Disp1Q3TDN0 1521 aa28.26■■■□□ 2.11
Ccdc34-201ENSMUST00000028580 Setd1bQ8CFT2 1985 aa28.26■■■□□ 2.11
Ccdc34-201ENSMUST00000028580 Grin2aP35436 1464 aa28.26■■■□□ 2.11
Ccdc34-201ENSMUST00000028580 Camsap2Q8C1B1 1461 aa28.26■■■□□ 2.11
Ccdc34-201ENSMUST00000028580 1700123L14RikQ3V2K7 440 aa28.25■■■□□ 2.11
Ccdc34-201ENSMUST00000028580 Lrriq1Q0P5X1 1673 aa28.24■■■□□ 2.11
Ccdc34-201ENSMUST00000028580 Ift140E9PY46 1464 aa28.24■■■□□ 2.11
Ccdc34-201ENSMUST00000028580 Ccnb3Q810T2 1396 aa28.22■■■□□ 2.11
Ccdc34-201ENSMUST00000028580 Fhod3Q76LL6 1578 aa28.21■■■□□ 2.11
Ccdc34-201ENSMUST00000028580 Dennd4bQ3U1Y4 1499 aa28.19■■■□□ 2.1
Ccdc34-201ENSMUST00000028580 Aplp2Q06335 707 aa28.17■■■□□ 2.1
Ccdc34-201ENSMUST00000028580 Adamts12Q811B3 1600 aa28.17■■■□□ 2.1
Ccdc34-201ENSMUST00000028580 Gm13697A2AK42 830 aa28.15■■■□□ 2.1
Ccdc34-201ENSMUST00000028580 Gcc2Q8CHG3 1679 aa28.14■■■□□ 2.1
Ccdc34-201ENSMUST00000028580 NclP09405 707 aaKnown RBP28.14■■■□□ 2.1
Ccdc34-201ENSMUST00000028580 Hspa5P20029 655 aaKnown RBP28.14■■■□□ 2.09
Ccdc34-201ENSMUST00000028580 Kif27Q7M6Z4 1394 aa28.14■■■□□ 2.09
Ccdc34-201ENSMUST00000028580 Cul7Q8VE73 1689 aa28.13■■■□□ 2.09
Ccdc34-201ENSMUST00000028580 Soga1E1U8D0 1418 aa28.12■■■□□ 2.09
Ccdc34-201ENSMUST00000028580 Nup160Q9Z0W3 1402 aaKnown RBP28.1■■■□□ 2.09
Ccdc34-201ENSMUST00000028580 WizO88286 1684 aaKnown RBP28.1■■■□□ 2.09
Ccdc34-201ENSMUST00000028580 Naip5Q9R016 1403 aa28.06■■■□□ 2.08
Ccdc34-201ENSMUST00000028580 NexmifQ5DTT1 1515 aa28.06■■■□□ 2.08
Ccdc34-201ENSMUST00000028580 Rfx7F8VPJ6 1459 aa28.04■■■□□ 2.08
Ccdc34-201ENSMUST00000028580 BC005561E9Q5E2 1589 aa28.03■■■□□ 2.08
Ccdc34-201ENSMUST00000028580 Abca16E9PWJ7 1678 aa28■■■□□ 2.07
Ccdc34-201ENSMUST00000028580 Ncoa2Q61026 1462 aa28■■■□□ 2.07
Ccdc34-201ENSMUST00000028580 Setbp1Q9Z180 1582 aa27.99■■■□□ 2.07
Ccdc34-201ENSMUST00000028580 Tnnt3Q9QZ47 272 aa27.96■■■□□ 2.07
Ccdc34-201ENSMUST00000028580 Cc2d2bA0A286YDU8 1405 aa27.95■■■□□ 2.06
Ccdc34-201ENSMUST00000028580 PxdnQ3UQ28 1475 aa27.94■■■□□ 2.06
Ccdc34-201ENSMUST00000028580 Chic2Q9D9G3 165 aa27.9■■■□□ 2.06
Ccdc34-201ENSMUST00000028580 Mug1P28665 1476 aa27.87■■■□□ 2.05
Ccdc34-201ENSMUST00000028580 Stra8P70278 393 aa27.87■■■□□ 2.05
Ccdc34-201ENSMUST00000028580 Eif4g3Q80XI3 1579 aaKnown RBP27.84■■■□□ 2.05
Ccdc34-201ENSMUST00000028580 Rusc2Q80U22 1514 aa27.83■■■□□ 2.05
Ccdc34-201ENSMUST00000028580 Rapgef6Q5NCJ1 1609 aa27.82■■■□□ 2.04
Ccdc34-201ENSMUST00000028580 Ncoa3O09000 1398 aa27.82■■■□□ 2.04
Ccdc34-201ENSMUST00000028580 WrnO09053 1401 aa27.82■■■□□ 2.04
Ccdc34-201ENSMUST00000028580 Abcc5Q9R1X5 1436 aa27.82■■■□□ 2.04
Ccdc34-201ENSMUST00000028580 Mphosph9A6H5Y1 991 aa27.82■■■□□ 2.04
Ccdc34-201ENSMUST00000028580 Mapk8ip2Q9ERE9 830 aa27.79■■■□□ 2.04
Ccdc34-201ENSMUST00000028580 Ube2uB1AUC4 352 aa27.79■■■□□ 2.04
Ccdc34-201ENSMUST00000028580 Plekhh2Q8C115 1491 aa27.78■■■□□ 2.04
Ccdc34-201ENSMUST00000028580 Abcc2Q8VI47 1543 aa27.78■■■□□ 2.04
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms