RNA–Protein interactions for RNA: ENSMUST00000025667.12

Rtn3-201, Transcript of Reticulon-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtn3, Length 2,841 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-201ENSMUST00000025667 Pak3Q61036 559 aa22.34■■□□□ 1.17
Rtn3-201ENSMUST00000025667 Fam135aQ6NS59 1506 aa22.32■■□□□ 1.16
Rtn3-201ENSMUST00000025667 Ccdc88bQ4QRL3 1481 aa22.31■■□□□ 1.16
Rtn3-201ENSMUST00000025667 Wdr43Q6ZQL4 677 aaKnown RBP22.3■■□□□ 1.16
Rtn3-201ENSMUST00000025667 Rpap1Q80TE0 1409 aa22.25■■□□□ 1.15
Rtn3-201ENSMUST00000025667 Hsp90aa1P07901 733 aaKnown RBP22.25■■□□□ 1.15
Rtn3-201ENSMUST00000025667 Phldb1Q6PDH0 1371 aaKnown RBP22.24■■□□□ 1.15
Rtn3-201ENSMUST00000025667 Washc2Q6PGL7 1334 aa22.23■■□□□ 1.15
Rtn3-201ENSMUST00000025667 Liat1Q810M6 228 aa22.21■■□□□ 1.15
Rtn3-201ENSMUST00000025667 Egfem1Q8C088 590 aa22.21■■□□□ 1.15
Rtn3-201ENSMUST00000025667 Unc13aQ4KUS2 1712 aa22.18■■□□□ 1.14
Rtn3-201ENSMUST00000025667 Esf1Q3V1V3 845 aaKnown RBP22.12■■□□□ 1.13
Rtn3-201ENSMUST00000025667 Kcnn1Q9EQR3 537 aa22.09■■□□□ 1.13
Rtn3-201ENSMUST00000025667 Ubl4bQ9CQ84 188 aa22.05■■□□□ 1.12
Rtn3-201ENSMUST00000025667 Ipo9Q91YE6 1041 aa22.04■■□□□ 1.12
Rtn3-201ENSMUST00000025667 Ccer2J3QPU5 274 aa22.03■■□□□ 1.12
Rtn3-201ENSMUST00000025667 Eid3Q3V124 375 aa22.03■■□□□ 1.12
Rtn3-201ENSMUST00000025667 Ncapd3Q6ZQK0 1506 aa22.02■■□□□ 1.12
Rtn3-201ENSMUST00000025667 Baz1bQ9Z277 1479 aa22■■□□□ 1.11
Rtn3-201ENSMUST00000025667 4933416C03RikQ3V063 378 aa21.98■■□□□ 1.11
Rtn3-201ENSMUST00000025667 Zfp777B9EKF4 885 aa21.95■■□□□ 1.1
Rtn3-201ENSMUST00000025667 Slc24a1Q91WD8 1130 aa21.89■■□□□ 1.09
Rtn3-201ENSMUST00000025667 Iqcf3Q9D498 203 aa21.88■■□□□ 1.09
Rtn3-201ENSMUST00000025667 Eif5bQ05D44 1216 aaKnown RBP21.88■■□□□ 1.09
Rtn3-201ENSMUST00000025667 Golga3P55937 1487 aa21.87■■□□□ 1.09
Rtn3-201ENSMUST00000025667 AampJ3QN89 436 aa21.87■■□□□ 1.09
Rtn3-201ENSMUST00000025667 DaxxO35613 739 aa21.84■■□□□ 1.09
Rtn3-201ENSMUST00000025667 Rtn4Q99P72 1162 aaKnown RBP21.82■■□□□ 1.08
Rtn3-201ENSMUST00000025667 Mrc2Q64449 1479 aa21.81■■□□□ 1.08
Rtn3-201ENSMUST00000025667 Plekhg3Q4VAC9 1341 aa21.81■■□□□ 1.08
Rtn3-201ENSMUST00000025667 Pdcl3Q8BVF2 240 aa21.79■■□□□ 1.08
Rtn3-201ENSMUST00000025667 Slc4a3P16283 1227 aa21.79■■□□□ 1.08
Rtn3-201ENSMUST00000025667 Kif15Q6P9L6 1387 aa21.77■■□□□ 1.08
Rtn3-201ENSMUST00000025667 Top2bQ64511 1612 aa21.77■■□□□ 1.08
Rtn3-201ENSMUST00000025667 NeflP08551 543 aa21.75■■□□□ 1.07
Rtn3-201ENSMUST00000025667 NclP09405 707 aaKnown RBP21.75■■□□□ 1.07
Rtn3-201ENSMUST00000025667 Rapgef2Q8CHG7 1496 aa21.75■■□□□ 1.07
Rtn3-201ENSMUST00000025667 Lamc3Q9R0B6 1581 aa21.73■■□□□ 1.07
Rtn3-201ENSMUST00000025667 Myt1lP97500 1187 aa21.73■■□□□ 1.07
Rtn3-201ENSMUST00000025667 Kdm5bQ80Y84 1544 aa21.72■■□□□ 1.07
Rtn3-201ENSMUST00000025667 Taok2Q6ZQ29 1240 aa21.71■■□□□ 1.07
Rtn3-201ENSMUST00000025667 Cux2P70298 1426 aa21.68■■□□□ 1.06
Rtn3-201ENSMUST00000025667 P3h3Q8CG70 732 aa21.68■■□□□ 1.06
Rtn3-201ENSMUST00000025667 NgefQ8CHT1 710 aa21.68■■□□□ 1.06
Rtn3-201ENSMUST00000025667 Smg6P61406 1418 aaKnown RBP21.68■■□□□ 1.06
Rtn3-201ENSMUST00000025667 Gtf2a1Q99PM3 378 aa21.65■■□□□ 1.06
Rtn3-201ENSMUST00000025667 Znf692Q3U381 531 aa21.63■■□□□ 1.05
Rtn3-201ENSMUST00000025667 Gtf3c5Q8R2T8 520 aa21.63■■□□□ 1.05
Rtn3-201ENSMUST00000025667 Tcerg1Q8CGF7 1100 aaKnown RBP21.62■■□□□ 1.05
Rtn3-201ENSMUST00000025667 Gm13697A2AK42 830 aa21.61■■□□□ 1.05
Rtn3-201ENSMUST00000025667 Sin3aQ60520 1274 aaKnown RBP21.61■■□□□ 1.05
Rtn3-201ENSMUST00000025667 Arhgap27A2AB59 869 aa21.61■■□□□ 1.05
Rtn3-201ENSMUST00000025667 DmtnQ9WV69 405 aa21.61■■□□□ 1.05
Rtn3-201ENSMUST00000025667 Clip1Q922J3 1391 aa21.6■■□□□ 1.05
Rtn3-201ENSMUST00000025667 ChgaP26339 463 aaKnown RBP21.6■■□□□ 1.05
Rtn3-201ENSMUST00000025667 TnnQ80Z71 1560 aa21.58■■□□□ 1.05
Rtn3-201ENSMUST00000025667 Cep162Q6ZQ06 1403 aa21.58■■□□□ 1.05
Rtn3-201ENSMUST00000025667 Dnttip2Q8R2M2 758 aaKnown RBP21.55■■□□□ 1.04
Rtn3-201ENSMUST00000025667 BccipQ9CWI3 316 aa21.55■■□□□ 1.04
Rtn3-201ENSMUST00000025667 Fmn1Q05860 1466 aa21.51■■□□□ 1.03
Rtn3-201ENSMUST00000025667 Rrp9Q91WM3 475 aaKnown RBP21.49■■□□□ 1.03
Rtn3-201ENSMUST00000025667 Zbtb4Q5F293 982 aa21.47■■□□□ 1.03
Rtn3-201ENSMUST00000025667 Npm1Q61937 292 aaKnown RBP21.47■■□□□ 1.03
Rtn3-201ENSMUST00000025667 UacaQ8CGB3 1411 aa21.45■■□□□ 1.03
Rtn3-201ENSMUST00000025667 CatipB9EKE5 520 aa21.45■■□□□ 1.02
Rtn3-201ENSMUST00000025667 Kif21aQ9QXL2 1672 aa21.44■■□□□ 1.02
Rtn3-201ENSMUST00000025667 Kcnh8P59111 1102 aa21.44■■□□□ 1.02
Rtn3-201ENSMUST00000025667 AU015836B2RUM3 263 aa21.43■■□□□ 1.02
Rtn3-201ENSMUST00000025667 Plppr3Q7TPB0 716 aa21.42■■□□□ 1.02
Rtn3-201ENSMUST00000025667 Scaf1Q5U4C3 1256 aaKnown RBP21.41■■□□□ 1.02
Rtn3-201ENSMUST00000025667 Ccdc18Q640L5 1455 aa21.41■■□□□ 1.02
Rtn3-201ENSMUST00000025667 Camsap1A2AHC3 1581 aa21.39■■□□□ 1.02
Rtn3-201ENSMUST00000025667 Mrs2Q5NCE8 434 aa21.39■■□□□ 1.01
Rtn3-201ENSMUST00000025667 Slc4a2P13808 1237 aaKnown RBP21.36■■□□□ 1.01
Rtn3-201ENSMUST00000025667 Armcx1Q9CX83 456 aa21.35■■□□□ 1.01
Rtn3-201ENSMUST00000025667 Znf316Q6PGE4 1016 aa21.33■■□□□ 1.01
Rtn3-201ENSMUST00000025667 Lrriq1Q0P5X1 1673 aa21.33■■□□□ 1.01
Rtn3-201ENSMUST00000025667 Chrna2Q91X60 512 aa21.3■■□□□ 1
Rtn3-201ENSMUST00000025667 Ncoa2Q61026 1462 aa21.29■■□□□ 1
Rtn3-201ENSMUST00000025667 Hspa5P20029 655 aaKnown RBP21.28■■□□□ 1
Rtn3-201ENSMUST00000025667 Nkx1-2P42580 305 aa21.27■■□□□ 1
Rtn3-201ENSMUST00000025667 Sart3Q9JLI8 962 aaKnown RBP21.27■□□□□ 0.99
Rtn3-201ENSMUST00000025667 LrpprcQ6PB66 1392 aaKnown RBP21.26■□□□□ 0.99
Rtn3-201ENSMUST00000025667 CanxP35564 591 aaKnown RBP21.26■□□□□ 0.99
Rtn3-201ENSMUST00000025667 Dhx29Q6PGC1 1365 aaKnown RBP21.25■□□□□ 0.99
Rtn3-201ENSMUST00000025667 TchhA0A0B4J1F9 1599 aa21.24■□□□□ 0.99
Rtn3-201ENSMUST00000025667 Pdlim2Q8R1G6 349 aa21.24■□□□□ 0.99
Rtn3-201ENSMUST00000025667 Rbm10Q99KG3 930 aaKnown RBP21.23■□□□□ 0.99
Rtn3-201ENSMUST00000025667 Npm2Q80W85 207 aa21.22■□□□□ 0.99
Rtn3-201ENSMUST00000025667 Wwc2Q6NXJ0 1187 aa21.21■□□□□ 0.99
Rtn3-201ENSMUST00000025667 Mroh3A0A1D5RM54 893 aa21.19■□□□□ 0.98
Rtn3-201ENSMUST00000025667 L3mbtl2P59178 703 aa21.19■□□□□ 0.98
Rtn3-201ENSMUST00000025667 Top2aQ01320 1528 aaKnown RBP21.17■□□□□ 0.98
Rtn3-201ENSMUST00000025667 Mre11Q61216 706 aa21.17■□□□□ 0.98
Rtn3-201ENSMUST00000025667 PogzQ8BZH4 1409 aaKnown RBP21.16■□□□□ 0.98
Rtn3-201ENSMUST00000025667 Exoc6Q8R313 802 aa21.14■□□□□ 0.98
Rtn3-201ENSMUST00000025667 Zbtb7cQ8VCZ7 619 aa21.14■□□□□ 0.98
Rtn3-201ENSMUST00000025667 Crocc2F6XLV1 1638 aa21.14■□□□□ 0.97
Rtn3-201ENSMUST00000025667 Grin2bQ01097 1482 aa21.13■□□□□ 0.97
Rtn3-201ENSMUST00000025667 Zfp91Q62511 572 aa21.13■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms