RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Duox2A2AQ99 1517 aa36.53■■■■□ 3.44
Cldnd1-201ENSMUST00000023426 Aebp2Q9Z248 504 aaKnown RBP36.52■■■■□ 3.44
Cldnd1-201ENSMUST00000023426 ClspnQ80YR7 1315 aa36.49■■■■□ 3.43
Cldnd1-201ENSMUST00000023426 Wdr66E9Q743 1299 aa36.48■■■■□ 3.43
Cldnd1-201ENSMUST00000023426 Kdm5bQ80Y84 1544 aa36.47■■■■□ 3.43
Cldnd1-201ENSMUST00000023426 TchhA0A0B4J1F9 1599 aa36.46■■■■□ 3.43
Cldnd1-201ENSMUST00000023426 Pcf11G3X9Z4 1553 aa36.46■■■■□ 3.43
Cldnd1-201ENSMUST00000023426 BlmO88700 1416 aa36.45■■■■□ 3.43
Cldnd1-201ENSMUST00000023426 Lmo7E9PYF4 1699 aaKnown RBP36.43■■■■□ 3.42
Cldnd1-201ENSMUST00000023426 Neurod1Q60867 357 aa36.43■■■■□ 3.42
Cldnd1-201ENSMUST00000023426 CntlnA2AM05 1397 aa36.43■■■■□ 3.42
Cldnd1-201ENSMUST00000023426 Cux1P53564 1515 aa36.36■■■■□ 3.41
Cldnd1-201ENSMUST00000023426 Slx4Q6P1D7 1565 aa36.34■■■■□ 3.41
Cldnd1-201ENSMUST00000023426 SynmQ70IV5 1561 aa36.33■■■■□ 3.41
Cldnd1-201ENSMUST00000023426 Urb2E9Q7L1 1524 aaKnown RBP36.28■■■■□ 3.4
Cldnd1-201ENSMUST00000023426 Fyco1Q8VDC1 1437 aa36.28■■■■□ 3.4
Cldnd1-201ENSMUST00000023426 Peg3Q3URU2 1571 aa36.27■■■■□ 3.4
Cldnd1-201ENSMUST00000023426 Dhx29Q6PGC1 1365 aaKnown RBP36.26■■■■□ 3.4
Cldnd1-201ENSMUST00000023426 Polr1aO35134 1717 aaKnown RBP36.26■■■■□ 3.39
Cldnd1-201ENSMUST00000023426 Rpap1Q80TE0 1409 aa36.26■■■■□ 3.39
Cldnd1-201ENSMUST00000023426 Samd9lQ69Z37 1561 aa36.22■■■■□ 3.39
Cldnd1-201ENSMUST00000023426 Aebp1Q640N1 1128 aa36.07■■■■□ 3.37
Cldnd1-201ENSMUST00000023426 Crocc2F6XLV1 1638 aa36.06■■■■□ 3.36
Cldnd1-201ENSMUST00000023426 Rad54l2Q99NG0 1466 aa36.01■■■■□ 3.36
Cldnd1-201ENSMUST00000023426 Lmod2Q3UHZ5 550 aa35.99■■■■□ 3.35
Cldnd1-201ENSMUST00000023426 3425401B19RikD3Z1D3 1412 aa35.98■■■■□ 3.35
Cldnd1-201ENSMUST00000023426 Anks4bQ8K3X6 423 aa35.97■■■■□ 3.35
Cldnd1-201ENSMUST00000023426 Gm1043A0A140LJC2 1431 aa35.96■■■■□ 3.35
Cldnd1-201ENSMUST00000023426 Mrc2Q64449 1479 aa35.96■■■■□ 3.35
Cldnd1-201ENSMUST00000023426 Mia2Q91ZV0 1396 aa35.95■■■■□ 3.35
Cldnd1-201ENSMUST00000023426 Eid3Q3V124 375 aa35.94■■■■□ 3.34
Cldnd1-201ENSMUST00000023426 Fhad1A6PWD2 1420 aa35.93■■■■□ 3.34
Cldnd1-201ENSMUST00000023426 Ccer2J3QPU5 274 aa35.92■■■■□ 3.34
Cldnd1-201ENSMUST00000023426 Kif21aQ9QXL2 1672 aa35.91■■■■□ 3.34
Cldnd1-201ENSMUST00000023426 Cdk11bP24788 784 aaKnown RBP35.9■■■■□ 3.34
Cldnd1-201ENSMUST00000023426 Nop58Q6DFW4 536 aaKnown RBP35.9■■■■□ 3.34
Cldnd1-201ENSMUST00000023426 EprsQ8CGC7 1512 aaKnown RBP35.89■■■■□ 3.34
Cldnd1-201ENSMUST00000023426 Fam50aQ9WV03 339 aaKnown RBP35.88■■■■□ 3.33
Cldnd1-201ENSMUST00000023426 Pla2r1Q62028 1487 aa35.85■■■■□ 3.33
Cldnd1-201ENSMUST00000023426 Vps8Q0P5W1 1427 aa35.81■■■■□ 3.32
Cldnd1-201ENSMUST00000023426 Gm7298A0A0N4SVU1 1476 aa35.81■■■■□ 3.32
Cldnd1-201ENSMUST00000023426 Ankrd36D3Z4K0 1415 aa35.79■■■■□ 3.32
Cldnd1-201ENSMUST00000023426 Magi3Q9EQJ9 1476 aa35.77■■■■□ 3.32
Cldnd1-201ENSMUST00000023426 CadpsQ80TJ1 1355 aa35.77■■■■□ 3.32
Cldnd1-201ENSMUST00000023426 Naip2Q9QUK4 1447 aa35.75■■■■□ 3.31
Cldnd1-201ENSMUST00000023426 Abca5Q8K448 1642 aa35.75■■■■□ 3.31
Cldnd1-201ENSMUST00000023426 Ppargc1bQ8VHJ7 1014 aa35.74■■■■□ 3.31
Cldnd1-201ENSMUST00000023426 Gpatch8A2A6A1 1505 aa35.7■■■■□ 3.3
Cldnd1-201ENSMUST00000023426 Lmtk2Q3TYD6 1471 aa35.69■■■■□ 3.3
Cldnd1-201ENSMUST00000023426 Grin2aP35436 1464 aa35.68■■■■□ 3.3
Cldnd1-201ENSMUST00000023426 UacaQ8CGB3 1411 aa35.65■■■■□ 3.3
Cldnd1-201ENSMUST00000023426 Plb1Q3TTY0 1478 aa35.63■■■■□ 3.29
Cldnd1-201ENSMUST00000023426 Disp1Q3TDN0 1521 aa35.61■■■■□ 3.29
Cldnd1-201ENSMUST00000023426 Adamts12Q811B3 1600 aa35.6■■■■□ 3.29
Cldnd1-201ENSMUST00000023426 A2mQ6GQT1 1474 aa35.59■■■■□ 3.29
Cldnd1-201ENSMUST00000023426 Kif27Q7M6Z4 1394 aa35.59■■■■□ 3.29
Cldnd1-201ENSMUST00000023426 Ccnb3Q810T2 1396 aa35.59■■■■□ 3.29
Cldnd1-201ENSMUST00000023426 Soga1E1U8D0 1418 aa35.56■■■■□ 3.28
Cldnd1-201ENSMUST00000023426 WizO88286 1684 aaKnown RBP35.51■■■■□ 3.27
Cldnd1-201ENSMUST00000023426 Gcc2Q8CHG3 1679 aa35.45■■■■□ 3.27
Cldnd1-201ENSMUST00000023426 Ift140E9PY46 1464 aa35.43■■■■□ 3.26
Cldnd1-201ENSMUST00000023426 Pbrm1Q8BSQ9 1634 aaKnown RBP35.41■■■■□ 3.26
Cldnd1-201ENSMUST00000023426 NclP09405 707 aaKnown RBP35.41■■■■□ 3.26
Cldnd1-201ENSMUST00000023426 Fhod3Q76LL6 1578 aa35.39■■■■□ 3.26
Cldnd1-201ENSMUST00000023426 NexmifQ5DTT1 1515 aa35.38■■■■□ 3.25
Cldnd1-201ENSMUST00000023426 Camsap2Q8C1B1 1461 aa35.37■■■■□ 3.25
Cldnd1-201ENSMUST00000023426 Hspa5P20029 655 aaKnown RBP35.36■■■■□ 3.25
Cldnd1-201ENSMUST00000023426 Dennd4bQ3U1Y4 1499 aa35.36■■■■□ 3.25
Cldnd1-201ENSMUST00000023426 Nup160Q9Z0W3 1402 aaKnown RBP35.36■■■■□ 3.25
Cldnd1-201ENSMUST00000023426 BC005561E9Q5E2 1589 aa35.35■■■■□ 3.25
Cldnd1-201ENSMUST00000023426 PxdnQ3UQ28 1475 aa35.32■■■■□ 3.25
Cldnd1-201ENSMUST00000023426 Dnajc5bQ9CQ94 199 aa35.32■■■■□ 3.25
Cldnd1-201ENSMUST00000023426 Setd1bQ8CFT2 1985 aa35.31■■■■□ 3.24
Cldnd1-201ENSMUST00000023426 Rfx7F8VPJ6 1459 aa35.29■■■■□ 3.24
Cldnd1-201ENSMUST00000023426 Gm13697A2AK42 830 aa35.29■■■■□ 3.24
Cldnd1-201ENSMUST00000023426 Cul7Q8VE73 1689 aa35.29■■■■□ 3.24
Cldnd1-201ENSMUST00000023426 Abca16E9PWJ7 1678 aa35.27■■■■□ 3.24
Cldnd1-201ENSMUST00000023426 Chic2Q9D9G3 165 aa35.24■■■■□ 3.23
Cldnd1-201ENSMUST00000023426 WrnO09053 1401 aa35.23■■■■□ 3.23
Cldnd1-201ENSMUST00000023426 Mug1P28665 1476 aa35.2■■■■□ 3.23
Cldnd1-201ENSMUST00000023426 Ube2uB1AUC4 352 aa35.18■■■■□ 3.22
Cldnd1-201ENSMUST00000023426 Rapgef6Q5NCJ1 1609 aa35.17■■■■□ 3.22
Cldnd1-201ENSMUST00000023426 Naip5Q9R016 1403 aa35.16■■■■□ 3.22
Cldnd1-201ENSMUST00000023426 Csrnp3P59055 597 aa35.15■■■■□ 3.22
Cldnd1-201ENSMUST00000023426 Cc2d2bA0A286YDU8 1405 aa35.15■■■■□ 3.22
Cldnd1-201ENSMUST00000023426 Ncoa2Q61026 1462 aa35.14■■■■□ 3.22
Cldnd1-201ENSMUST00000023426 Ncoa3O09000 1398 aa35.13■■■■□ 3.21
Cldnd1-201ENSMUST00000023426 Setbp1Q9Z180 1582 aa35.09■■■■□ 3.21
Cldnd1-201ENSMUST00000023426 Abcc5Q9R1X5 1436 aa35.07■■■■□ 3.2
Cldnd1-201ENSMUST00000023426 Mphosph9A6H5Y1 991 aa35.07■■■■□ 3.2
Cldnd1-201ENSMUST00000023426 Plekhh2Q8C115 1491 aa35.05■■■■□ 3.2
Cldnd1-201ENSMUST00000023426 Arhgap27A2AB59 869 aa35.05■■■■□ 3.2
Cldnd1-201ENSMUST00000023426 Shroom2A2ALU4 1481 aa35.04■■■■□ 3.2
Cldnd1-201ENSMUST00000023426 Abcc2Q8VI47 1543 aa35.03■■■■□ 3.2
Cldnd1-201ENSMUST00000023426 Cabp1Q9JLK7 227 aa35.03■■■■□ 3.2
Cldnd1-201ENSMUST00000023426 Arhgef11Q68FM7 1552 aa35.01■■■■□ 3.19
Cldnd1-201ENSMUST00000023426 Arhgef40Q3UPH7 1517 aa34.95■■■■□ 3.19
Cldnd1-201ENSMUST00000023426 Kiaa1551Q5DTW7 1521 aa34.95■■■■□ 3.19
Cldnd1-201ENSMUST00000023426 Lrriq1Q0P5X1 1673 aa34.95■■■■□ 3.19
Cldnd1-201ENSMUST00000023426 Dhx57Q6P5D3 1388 aaKnown RBP34.95■■■■□ 3.18
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms