RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 AqrQ8CFQ3 1481 aaKnown RBP21.99■■□□□ 1.11
Nkx3-1-201ENSMUST00000022646 Cdk11bP24788 784 aaKnown RBP21.99■■□□□ 1.11
Nkx3-1-201ENSMUST00000022646 Eid3Q3V124 375 aa21.98■■□□□ 1.11
Nkx3-1-201ENSMUST00000022646 Pcf11G3X9Z4 1553 aa21.96■■□□□ 1.11
Nkx3-1-201ENSMUST00000022646 Npm1Q61937 292 aaKnown RBP21.95■■□□□ 1.11
Nkx3-1-201ENSMUST00000022646 Ubl4bQ9CQ84 188 aa21.94■■□□□ 1.1
Nkx3-1-201ENSMUST00000022646 Thoc2B1AZI6 1594 aaKnown RBP21.93■■□□□ 1.1
Nkx3-1-201ENSMUST00000022646 Slx4Q6P1D7 1565 aa21.93■■□□□ 1.1
Nkx3-1-201ENSMUST00000022646 TchhA0A0B4J1F9 1599 aa21.92■■□□□ 1.1
Nkx3-1-201ENSMUST00000022646 Efcab5A0JP43 1406 aa21.91■■□□□ 1.1
Nkx3-1-201ENSMUST00000022646 Carmil1Q6EDY6 1374 aa21.89■■□□□ 1.09
Nkx3-1-201ENSMUST00000022646 LrpprcQ6PB66 1392 aaKnown RBP21.88■■□□□ 1.09
Nkx3-1-201ENSMUST00000022646 Cux1P53564 1515 aa21.87■■□□□ 1.09
Nkx3-1-201ENSMUST00000022646 Lmo7E9PYF4 1699 aaKnown RBP21.87■■□□□ 1.09
Nkx3-1-201ENSMUST00000022646 PogzQ8BZH4 1409 aaKnown RBP21.84■■□□□ 1.09
Nkx3-1-201ENSMUST00000022646 Lmod2Q3UHZ5 550 aa21.84■■□□□ 1.09
Nkx3-1-201ENSMUST00000022646 Duox2A2AQ99 1517 aa21.84■■□□□ 1.09
Nkx3-1-201ENSMUST00000022646 CntlnA2AM05 1397 aa21.82■■□□□ 1.08
Nkx3-1-201ENSMUST00000022646 Fam50aQ9WV03 339 aaKnown RBP21.81■■□□□ 1.08
Nkx3-1-201ENSMUST00000022646 Csrnp3P59055 597 aa21.78■■□□□ 1.08
Nkx3-1-201ENSMUST00000022646 Urb2E9Q7L1 1524 aaKnown RBP21.75■■□□□ 1.07
Nkx3-1-201ENSMUST00000022646 Fam135aQ6NS59 1506 aa21.75■■□□□ 1.07
Nkx3-1-201ENSMUST00000022646 3425401B19RikD3Z1D3 1412 aa21.72■■□□□ 1.07
Nkx3-1-201ENSMUST00000022646 SynmQ70IV5 1561 aa21.72■■□□□ 1.07
Nkx3-1-201ENSMUST00000022646 Fyco1Q8VDC1 1437 aa21.71■■□□□ 1.07
Nkx3-1-201ENSMUST00000022646 Samd9lQ69Z37 1561 aa21.71■■□□□ 1.07
Nkx3-1-201ENSMUST00000022646 Peg3Q3URU2 1571 aa21.7■■□□□ 1.06
Nkx3-1-201ENSMUST00000022646 Aebp1Q640N1 1128 aa21.67■■□□□ 1.06
Nkx3-1-201ENSMUST00000022646 Dhx29Q6PGC1 1365 aaKnown RBP21.66■■□□□ 1.06
Nkx3-1-201ENSMUST00000022646 1700123L14RikQ3V2K7 440 aa21.64■■□□□ 1.05
Nkx3-1-201ENSMUST00000022646 Rad54l2Q99NG0 1466 aa21.63■■□□□ 1.05
Nkx3-1-201ENSMUST00000022646 Polr1aO35134 1717 aaKnown RBP21.62■■□□□ 1.05
Nkx3-1-201ENSMUST00000022646 Fhad1A6PWD2 1420 aa21.61■■□□□ 1.05
Nkx3-1-201ENSMUST00000022646 Gm1043A0A140LJC2 1431 aa21.6■■□□□ 1.05
Nkx3-1-201ENSMUST00000022646 Mia2Q91ZV0 1396 aa21.59■■□□□ 1.05
Nkx3-1-201ENSMUST00000022646 Rpap1Q80TE0 1409 aa21.57■■□□□ 1.04
Nkx3-1-201ENSMUST00000022646 Gm7298A0A0N4SVU1 1476 aa21.56■■□□□ 1.04
Nkx3-1-201ENSMUST00000022646 NclP09405 707 aaKnown RBP21.55■■□□□ 1.04
Nkx3-1-201ENSMUST00000022646 Vps8Q0P5W1 1427 aa21.54■■□□□ 1.04
Nkx3-1-201ENSMUST00000022646 Ccer2J3QPU5 274 aa21.54■■□□□ 1.04
Nkx3-1-201ENSMUST00000022646 Ankrd36D3Z4K0 1415 aa21.53■■□□□ 1.04
Nkx3-1-201ENSMUST00000022646 Naip2Q9QUK4 1447 aa21.52■■□□□ 1.04
Nkx3-1-201ENSMUST00000022646 Crocc2F6XLV1 1638 aa21.51■■□□□ 1.03
Nkx3-1-201ENSMUST00000022646 Hspa5P20029 655 aaKnown RBP21.5■■□□□ 1.03
Nkx3-1-201ENSMUST00000022646 UacaQ8CGB3 1411 aa21.5■■□□□ 1.03
Nkx3-1-201ENSMUST00000022646 Mapk8ip2Q9ERE9 830 aa21.48■■□□□ 1.03
Nkx3-1-201ENSMUST00000022646 EprsQ8CGC7 1512 aaKnown RBP21.48■■□□□ 1.03
Nkx3-1-201ENSMUST00000022646 A2mQ6GQT1 1474 aa21.46■■□□□ 1.03
Nkx3-1-201ENSMUST00000022646 Pla2r1Q62028 1487 aa21.45■■□□□ 1.02
Nkx3-1-201ENSMUST00000022646 Kif21aQ9QXL2 1672 aa21.44■■□□□ 1.02
Nkx3-1-201ENSMUST00000022646 Ccnb3Q810T2 1396 aa21.44■■□□□ 1.02
Nkx3-1-201ENSMUST00000022646 Aplp2Q06335 707 aa21.43■■□□□ 1.02
Nkx3-1-201ENSMUST00000022646 CadpsQ80TJ1 1355 aa21.41■■□□□ 1.02
Nkx3-1-201ENSMUST00000022646 Gpatch8A2A6A1 1505 aa21.4■■□□□ 1.02
Nkx3-1-201ENSMUST00000022646 Ube2uB1AUC4 352 aa21.39■■□□□ 1.01
Nkx3-1-201ENSMUST00000022646 Chic2Q9D9G3 165 aa21.39■■□□□ 1.01
Nkx3-1-201ENSMUST00000022646 Magi3Q9EQJ9 1476 aa21.38■■□□□ 1.01
Nkx3-1-201ENSMUST00000022646 Abca5Q8K448 1642 aa21.38■■□□□ 1.01
Nkx3-1-201ENSMUST00000022646 Lmtk2Q3TYD6 1471 aa21.38■■□□□ 1.01
Nkx3-1-201ENSMUST00000022646 Kif27Q7M6Z4 1394 aa21.36■■□□□ 1.01
Nkx3-1-201ENSMUST00000022646 Gm13697A2AK42 830 aa21.35■■□□□ 1.01
Nkx3-1-201ENSMUST00000022646 Mrc2Q64449 1479 aa21.35■■□□□ 1.01
Nkx3-1-201ENSMUST00000022646 Dennd4bQ3U1Y4 1499 aa21.34■■□□□ 1.01
Nkx3-1-201ENSMUST00000022646 Grin2aP35436 1464 aa21.33■■□□□ 1
Nkx3-1-201ENSMUST00000022646 NexmifQ5DTT1 1515 aa21.29■■□□□ 1
Nkx3-1-201ENSMUST00000022646 Plb1Q3TTY0 1478 aa21.29■■□□□ 1
Nkx3-1-201ENSMUST00000022646 WizO88286 1684 aaKnown RBP21.28■■□□□ 1
Nkx3-1-201ENSMUST00000022646 Gm38655A0A286YDK6 273 aa21.27■■□□□ 1
Nkx3-1-201ENSMUST00000022646 BC005561E9Q5E2 1589 aa21.27■■□□□ 1
Nkx3-1-201ENSMUST00000022646 Gcc2Q8CHG3 1679 aa21.26■□□□□ 0.99
Nkx3-1-201ENSMUST00000022646 Naip5Q9R016 1403 aa21.25■□□□□ 0.99
Nkx3-1-201ENSMUST00000022646 Adamts12Q811B3 1600 aa21.25■□□□□ 0.99
Nkx3-1-201ENSMUST00000022646 Cul7Q8VE73 1689 aa21.25■□□□□ 0.99
Nkx3-1-201ENSMUST00000022646 Camsap2Q8C1B1 1461 aa21.25■□□□□ 0.99
Nkx3-1-201ENSMUST00000022646 Disp1Q3TDN0 1521 aa21.25■□□□□ 0.99
Nkx3-1-201ENSMUST00000022646 Hnrnpul2Q00PI9 745 aaKnown RBP21.24■□□□□ 0.99
Nkx3-1-201ENSMUST00000022646 Tnnt3Q9QZ47 272 aa21.24■□□□□ 0.99
Nkx3-1-201ENSMUST00000022646 Soga1E1U8D0 1418 aa21.22■□□□□ 0.99
Nkx3-1-201ENSMUST00000022646 Ncoa2Q61026 1462 aa21.22■□□□□ 0.99
Nkx3-1-201ENSMUST00000022646 Fhod3Q76LL6 1578 aa21.21■□□□□ 0.99
Nkx3-1-201ENSMUST00000022646 CenpbP27790 599 aa21.21■□□□□ 0.99
Nkx3-1-201ENSMUST00000022646 PxdnQ3UQ28 1475 aa21.19■□□□□ 0.98
Nkx3-1-201ENSMUST00000022646 Sin3aQ60520 1274 aaKnown RBP21.18■□□□□ 0.98
Nkx3-1-201ENSMUST00000022646 Mphosph9A6H5Y1 991 aa21.17■□□□□ 0.98
Nkx3-1-201ENSMUST00000022646 Stra8P70278 393 aa21.17■□□□□ 0.98
Nkx3-1-201ENSMUST00000022646 Cabp1Q9JLK7 227 aa21.14■□□□□ 0.98
Nkx3-1-201ENSMUST00000022646 WrnO09053 1401 aa21.14■□□□□ 0.97
Nkx3-1-201ENSMUST00000022646 Znf710Q3U288 666 aa21.13■□□□□ 0.97
Nkx3-1-201ENSMUST00000022646 Rfx7F8VPJ6 1459 aa21.13■□□□□ 0.97
Nkx3-1-201ENSMUST00000022646 Setd1bQ8CFT2 1985 aa21.11■□□□□ 0.97
Nkx3-1-201ENSMUST00000022646 Mug1P28665 1476 aa21.11■□□□□ 0.97
Nkx3-1-201ENSMUST00000022646 Abca16E9PWJ7 1678 aa21.1■□□□□ 0.97
Nkx3-1-201ENSMUST00000022646 Ncoa3O09000 1398 aa21.09■□□□□ 0.97
Nkx3-1-201ENSMUST00000022646 Abcc5Q9R1X5 1436 aa21.09■□□□□ 0.97
Nkx3-1-201ENSMUST00000022646 Dnajc5bQ9CQ94 199 aa21.09■□□□□ 0.97
Nkx3-1-201ENSMUST00000022646 Ift140E9PY46 1464 aa21.08■□□□□ 0.97
Nkx3-1-201ENSMUST00000022646 Setbp1Q9Z180 1582 aa21.08■□□□□ 0.96
Nkx3-1-201ENSMUST00000022646 Plekhh2Q8C115 1491 aa21.07■□□□□ 0.96
Nkx3-1-201ENSMUST00000022646 SafbD3YXK2 937 aaKnown RBP21.06■□□□□ 0.96
Nkx3-1-201ENSMUST00000022646 Zfp644E9QA22 1323 aa21.06■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms