RNA–Protein interactions for RNA: ENSMUST00000018737.12

Sparc-201, Transcript of SPARC, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Sparc, Length 2,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sparc-201ENSMUST00000018737 Pcf11G3X9Z4 1553 aa17.46■□□□□ 0.39
Sparc-201ENSMUST00000018737 Efcab5A0JP43 1406 aa17.44■□□□□ 0.38
Sparc-201ENSMUST00000018737 Lmo7E9PYF4 1699 aaKnown RBP17.43■□□□□ 0.38
Sparc-201ENSMUST00000018737 Slx4Q6P1D7 1565 aa17.42■□□□□ 0.38
Sparc-201ENSMUST00000018737 BlmO88700 1416 aa17.42■□□□□ 0.38
Sparc-201ENSMUST00000018737 Nop58Q6DFW4 536 aaKnown RBP17.42■□□□□ 0.38
Sparc-201ENSMUST00000018737 Cdk11bP24788 784 aaKnown RBP17.41■□□□□ 0.38
Sparc-201ENSMUST00000018737 Carmil1Q6EDY6 1374 aa17.4■□□□□ 0.38
Sparc-201ENSMUST00000018737 Ppargc1bQ8VHJ7 1014 aa17.39■□□□□ 0.37
Sparc-201ENSMUST00000018737 Cux1P53564 1515 aa17.38■□□□□ 0.37
Sparc-201ENSMUST00000018737 LrpprcQ6PB66 1392 aaKnown RBP17.38■□□□□ 0.37
Sparc-201ENSMUST00000018737 PogzQ8BZH4 1409 aaKnown RBP17.37■□□□□ 0.37
Sparc-201ENSMUST00000018737 Npm1Q61937 292 aaKnown RBP17.37■□□□□ 0.37
Sparc-201ENSMUST00000018737 Ubl4bQ9CQ84 188 aa17.36■□□□□ 0.37
Sparc-201ENSMUST00000018737 CntlnA2AM05 1397 aa17.36■□□□□ 0.37
Sparc-201ENSMUST00000018737 Duox2A2AQ99 1517 aa17.34■□□□□ 0.37
Sparc-201ENSMUST00000018737 Fam135aQ6NS59 1506 aa17.34■□□□□ 0.37
Sparc-201ENSMUST00000018737 Eid3Q3V124 375 aa17.33■□□□□ 0.36
Sparc-201ENSMUST00000018737 Peg3Q3URU2 1571 aa17.33■□□□□ 0.36
Sparc-201ENSMUST00000018737 Urb2E9Q7L1 1524 aaKnown RBP17.31■□□□□ 0.36
Sparc-201ENSMUST00000018737 SynmQ70IV5 1561 aa17.28■□□□□ 0.36
Sparc-201ENSMUST00000018737 Fyco1Q8VDC1 1437 aa17.26■□□□□ 0.35
Sparc-201ENSMUST00000018737 3425401B19RikD3Z1D3 1412 aa17.26■□□□□ 0.35
Sparc-201ENSMUST00000018737 Samd9lQ69Z37 1561 aa17.25■□□□□ 0.35
Sparc-201ENSMUST00000018737 Polr1aO35134 1717 aaKnown RBP17.23■□□□□ 0.35
Sparc-201ENSMUST00000018737 Lmod2Q3UHZ5 550 aa17.22■□□□□ 0.35
Sparc-201ENSMUST00000018737 Csrnp3P59055 597 aa17.22■□□□□ 0.35
Sparc-201ENSMUST00000018737 Fhad1A6PWD2 1420 aa17.2■□□□□ 0.34
Sparc-201ENSMUST00000018737 Fam50aQ9WV03 339 aaKnown RBP17.2■□□□□ 0.34
Sparc-201ENSMUST00000018737 Rpap1Q80TE0 1409 aa17.19■□□□□ 0.34
Sparc-201ENSMUST00000018737 Gm1043A0A140LJC2 1431 aa17.19■□□□□ 0.34
Sparc-201ENSMUST00000018737 Dhx29Q6PGC1 1365 aaKnown RBP17.19■□□□□ 0.34
Sparc-201ENSMUST00000018737 Aebp1Q640N1 1128 aa17.18■□□□□ 0.34
Sparc-201ENSMUST00000018737 Mia2Q91ZV0 1396 aa17.18■□□□□ 0.34
Sparc-201ENSMUST00000018737 Ankrd36D3Z4K0 1415 aa17.15■□□□□ 0.34
Sparc-201ENSMUST00000018737 Vps8Q0P5W1 1427 aa17.14■□□□□ 0.33
Sparc-201ENSMUST00000018737 Rad54l2Q99NG0 1466 aa17.14■□□□□ 0.33
Sparc-201ENSMUST00000018737 Ccer2J3QPU5 274 aa17.14■□□□□ 0.33
Sparc-201ENSMUST00000018737 1700123L14RikQ3V2K7 440 aa17.14■□□□□ 0.33
Sparc-201ENSMUST00000018737 Gm7298A0A0N4SVU1 1476 aa17.14■□□□□ 0.33
Sparc-201ENSMUST00000018737 UacaQ8CGB3 1411 aa17.13■□□□□ 0.33
Sparc-201ENSMUST00000018737 Naip2Q9QUK4 1447 aa17.12■□□□□ 0.33
Sparc-201ENSMUST00000018737 Crocc2F6XLV1 1638 aa17.1■□□□□ 0.33
Sparc-201ENSMUST00000018737 EprsQ8CGC7 1512 aaKnown RBP17.07■□□□□ 0.32
Sparc-201ENSMUST00000018737 Pla2r1Q62028 1487 aa17.06■□□□□ 0.32
Sparc-201ENSMUST00000018737 A2mQ6GQT1 1474 aa17.05■□□□□ 0.32
Sparc-201ENSMUST00000018737 Lmtk2Q3TYD6 1471 aa17.04■□□□□ 0.32
Sparc-201ENSMUST00000018737 Kif21aQ9QXL2 1672 aa17.04■□□□□ 0.32
Sparc-201ENSMUST00000018737 Abca5Q8K448 1642 aa17.04■□□□□ 0.32
Sparc-201ENSMUST00000018737 Aplp2Q06335 707 aa17.03■□□□□ 0.32
Sparc-201ENSMUST00000018737 NclP09405 707 aaKnown RBP17.02■□□□□ 0.32
Sparc-201ENSMUST00000018737 Gpatch8A2A6A1 1505 aa17.01■□□□□ 0.31
Sparc-201ENSMUST00000018737 Hspa5P20029 655 aaKnown RBP17.01■□□□□ 0.31
Sparc-201ENSMUST00000018737 CadpsQ80TJ1 1355 aa17.01■□□□□ 0.31
Sparc-201ENSMUST00000018737 Magi3Q9EQJ9 1476 aa17■□□□□ 0.31
Sparc-201ENSMUST00000018737 Ccnb3Q810T2 1396 aa17■□□□□ 0.31
Sparc-201ENSMUST00000018737 Dennd4bQ3U1Y4 1499 aa16.98■□□□□ 0.31
Sparc-201ENSMUST00000018737 Camsap2Q8C1B1 1461 aa16.98■□□□□ 0.31
Sparc-201ENSMUST00000018737 Mrc2Q64449 1479 aa16.97■□□□□ 0.31
Sparc-201ENSMUST00000018737 Gm13697A2AK42 830 aa16.96■□□□□ 0.31
Sparc-201ENSMUST00000018737 Cul7Q8VE73 1689 aa16.96■□□□□ 0.3
Sparc-201ENSMUST00000018737 Fhod3Q76LL6 1578 aa16.95■□□□□ 0.3
Sparc-201ENSMUST00000018737 Gcc2Q8CHG3 1679 aa16.95■□□□□ 0.3
Sparc-201ENSMUST00000018737 Grin2aP35436 1464 aa16.94■□□□□ 0.3
Sparc-201ENSMUST00000018737 Kif27Q7M6Z4 1394 aa16.94■□□□□ 0.3
Sparc-201ENSMUST00000018737 Adamts12Q811B3 1600 aa16.93■□□□□ 0.3
Sparc-201ENSMUST00000018737 WizO88286 1684 aaKnown RBP16.91■□□□□ 0.3
Sparc-201ENSMUST00000018737 NexmifQ5DTT1 1515 aa16.91■□□□□ 0.3
Sparc-201ENSMUST00000018737 Naip5Q9R016 1403 aa16.9■□□□□ 0.3
Sparc-201ENSMUST00000018737 Mapk8ip2Q9ERE9 830 aa16.9■□□□□ 0.3
Sparc-201ENSMUST00000018737 BC005561E9Q5E2 1589 aa16.89■□□□□ 0.29
Sparc-201ENSMUST00000018737 Soga1E1U8D0 1418 aa16.89■□□□□ 0.29
Sparc-201ENSMUST00000018737 Disp1Q3TDN0 1521 aa16.89■□□□□ 0.29
Sparc-201ENSMUST00000018737 Plb1Q3TTY0 1478 aa16.88■□□□□ 0.29
Sparc-201ENSMUST00000018737 Chic2Q9D9G3 165 aa16.88■□□□□ 0.29
Sparc-201ENSMUST00000018737 Tnnt3Q9QZ47 272 aa16.87■□□□□ 0.29
Sparc-201ENSMUST00000018737 Ncoa2Q61026 1462 aa16.86■□□□□ 0.29
Sparc-201ENSMUST00000018737 Rfx7F8VPJ6 1459 aa16.85■□□□□ 0.29
Sparc-201ENSMUST00000018737 Ube2uB1AUC4 352 aa16.83■□□□□ 0.28
Sparc-201ENSMUST00000018737 Setbp1Q9Z180 1582 aa16.83■□□□□ 0.28
Sparc-201ENSMUST00000018737 PxdnQ3UQ28 1475 aa16.82■□□□□ 0.28
Sparc-201ENSMUST00000018737 CenpbP27790 599 aa16.81■□□□□ 0.28
Sparc-201ENSMUST00000018737 Hnrnpul2Q00PI9 745 aaKnown RBP16.81■□□□□ 0.28
Sparc-201ENSMUST00000018737 Setd1bQ8CFT2 1985 aa16.81■□□□□ 0.28
Sparc-201ENSMUST00000018737 Abca16E9PWJ7 1678 aa16.8■□□□□ 0.28
Sparc-201ENSMUST00000018737 Stra8P70278 393 aa16.8■□□□□ 0.28
Sparc-201ENSMUST00000018737 Mphosph9A6H5Y1 991 aa16.78■□□□□ 0.28
Sparc-201ENSMUST00000018737 Ift140E9PY46 1464 aa16.78■□□□□ 0.28
Sparc-201ENSMUST00000018737 Mug1P28665 1476 aa16.77■□□□□ 0.28
Sparc-201ENSMUST00000018737 Znf710Q3U288 666 aa16.76■□□□□ 0.27
Sparc-201ENSMUST00000018737 Pbrm1Q8BSQ9 1634 aaKnown RBP16.76■□□□□ 0.27
Sparc-201ENSMUST00000018737 WrnO09053 1401 aa16.76■□□□□ 0.27
Sparc-201ENSMUST00000018737 Rapgef6Q5NCJ1 1609 aa16.75■□□□□ 0.27
Sparc-201ENSMUST00000018737 Ncoa3O09000 1398 aa16.75■□□□□ 0.27
Sparc-201ENSMUST00000018737 Abcc5Q9R1X5 1436 aa16.75■□□□□ 0.27
Sparc-201ENSMUST00000018737 Nup160Q9Z0W3 1402 aaKnown RBP16.75■□□□□ 0.27
Sparc-201ENSMUST00000018737 Gm38655A0A286YDK6 273 aa16.74■□□□□ 0.27
Sparc-201ENSMUST00000018737 Cabp1Q9JLK7 227 aa16.74■□□□□ 0.27
Sparc-201ENSMUST00000018737 Sin3aQ60520 1274 aaKnown RBP16.74■□□□□ 0.27
Sparc-201ENSMUST00000018737 Pprc1Q6NZN1 1644 aa16.73■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms