RNA–Protein interactions for RNA: ENSMUST00000012580.12

Hps3-201, Transcript of Hermansky-Pudlak syndrome 3 protein homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hps3, Length 4,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hps3-201ENSMUST00000012580 Sin3aQ60520 1274 aaKnown RBP17.47■□□□□ 0.39
Hps3-201ENSMUST00000012580 Calr4Q3TQS0 420 aa17.44■□□□□ 0.38
Hps3-201ENSMUST00000012580 Anp32aO35381 247 aa17.43■□□□□ 0.38
Hps3-201ENSMUST00000012580 P3h3Q8CG70 732 aa17.42■□□□□ 0.38
Hps3-201ENSMUST00000012580 PrkcshO08795 521 aa17.42■□□□□ 0.38
Hps3-201ENSMUST00000012580 Top2aQ01320 1528 aaKnown RBP17.41■□□□□ 0.38
Hps3-201ENSMUST00000012580 Top2bQ64511 1612 aa17.4■□□□□ 0.38
Hps3-201ENSMUST00000012580 Mrs2Q5NCE8 434 aa17.39■□□□□ 0.37
Hps3-201ENSMUST00000012580 Ppp4r2Q0VGB7 417 aa17.35■□□□□ 0.37
Hps3-201ENSMUST00000012580 Fkbp15Q6P9Q6 1216 aaKnown RBP17.34■□□□□ 0.37
Hps3-201ENSMUST00000012580 PtprkP35822 1457 aa17.33■□□□□ 0.36
Hps3-201ENSMUST00000012580 Iqgap2Q3UQ44 1575 aa17.31■□□□□ 0.36
Hps3-201ENSMUST00000012580 Baz1bQ9Z277 1479 aa17.31■□□□□ 0.36
Hps3-201ENSMUST00000012580 Ccer2J3QPU5 274 aa17.3■□□□□ 0.36
Hps3-201ENSMUST00000012580 Ncapd3Q6ZQK0 1506 aa17.3■□□□□ 0.36
Hps3-201ENSMUST00000012580 Ccdc18Q640L5 1455 aa17.29■□□□□ 0.36
Hps3-201ENSMUST00000012580 Arap1Q4LDD4 1452 aa17.28■□□□□ 0.36
Hps3-201ENSMUST00000012580 Arhgap35Q91YM2 1499 aa17.27■□□□□ 0.36
Hps3-201ENSMUST00000012580 Wwc2Q6NXJ0 1187 aa17.23■□□□□ 0.35
Hps3-201ENSMUST00000012580 Atad2bE9Q166 1460 aaKnown RBP17.23■□□□□ 0.35
Hps3-201ENSMUST00000012580 Pds5bQ4VA53 1446 aaKnown RBP17.23■□□□□ 0.35
Hps3-201ENSMUST00000012580 Aebp1Q640N1 1128 aa17.23■□□□□ 0.35
Hps3-201ENSMUST00000012580 Rgl3Q3UYI5 709 aa17.2■□□□□ 0.34
Hps3-201ENSMUST00000012580 Ercc6F8VPZ5 1481 aa17.19■□□□□ 0.34
Hps3-201ENSMUST00000012580 Gm13697A2AK42 830 aa17.19■□□□□ 0.34
Hps3-201ENSMUST00000012580 Wdr43Q6ZQL4 677 aaKnown RBP17.16■□□□□ 0.34
Hps3-201ENSMUST00000012580 Slc4a3P16283 1227 aa17.13■□□□□ 0.33
Hps3-201ENSMUST00000012580 Prdm10Q3UTQ7 1184 aa17.12■□□□□ 0.33
Hps3-201ENSMUST00000012580 Ifnlr1Q8CGK5 535 aa17.12■□□□□ 0.33
Hps3-201ENSMUST00000012580 Grwd1Q810D6 446 aaKnown RBP17.12■□□□□ 0.33
Hps3-201ENSMUST00000012580 Cux2P70298 1426 aa17.11■□□□□ 0.33
Hps3-201ENSMUST00000012580 Nolc1E9Q5C9 702 aaKnown RBP17.11■□□□□ 0.33
Hps3-201ENSMUST00000012580 Naip1Q9QWK5 1403 aa17.1■□□□□ 0.33
Hps3-201ENSMUST00000012580 Rad21Q61550 635 aaKnown RBP17.09■□□□□ 0.33
Hps3-201ENSMUST00000012580 Mia2Q91ZV0 1396 aa17.09■□□□□ 0.33
Hps3-201ENSMUST00000012580 Znf710Q3U288 666 aa17.08■□□□□ 0.33
Hps3-201ENSMUST00000012580 Cabp1Q9JLK7 227 aa17.08■□□□□ 0.33
Hps3-201ENSMUST00000012580 Os9Q8K2C7 672 aa17.07■□□□□ 0.32
Hps3-201ENSMUST00000012580 AqrQ8CFQ3 1481 aaKnown RBP17.07■□□□□ 0.32
Hps3-201ENSMUST00000012580 Shroom4Q1W617 1475 aa17.06■□□□□ 0.32
Hps3-201ENSMUST00000012580 Anp32bQ9EST5 272 aaKnown RBP17.05■□□□□ 0.32
Hps3-201ENSMUST00000012580 CntlnA2AM05 1397 aa17.05■□□□□ 0.32
Hps3-201ENSMUST00000012580 Fyco1Q8VDC1 1437 aa17.05■□□□□ 0.32
Hps3-201ENSMUST00000012580 NeflP08551 543 aa17.05■□□□□ 0.32
Hps3-201ENSMUST00000012580 Arhgef5E9Q7D5 1581 aa17.05■□□□□ 0.32
Hps3-201ENSMUST00000012580 Mphosph9A6H5Y1 991 aa17.04■□□□□ 0.32
Hps3-201ENSMUST00000012580 Pkd2O35245 966 aa17.04■□□□□ 0.32
Hps3-201ENSMUST00000012580 Exoc6Q8R313 802 aa17.04■□□□□ 0.32
Hps3-201ENSMUST00000012580 Erich6D3Z6S9 713 aa17.02■□□□□ 0.32
Hps3-201ENSMUST00000012580 Arhgap27A2AB59 869 aa17■□□□□ 0.31
Hps3-201ENSMUST00000012580 Rtl5Q5DTT4 599 aa17■□□□□ 0.31
Hps3-201ENSMUST00000012580 Ofd1Q80Z25 1017 aa17■□□□□ 0.31
Hps3-201ENSMUST00000012580 Carmil1Q6EDY6 1374 aa16.99■□□□□ 0.31
Hps3-201ENSMUST00000012580 Ccnb3Q810T2 1396 aa16.99■□□□□ 0.31
Hps3-201ENSMUST00000012580 Rpap1Q80TE0 1409 aa16.99■□□□□ 0.31
Hps3-201ENSMUST00000012580 Kif27Q7M6Z4 1394 aa16.98■□□□□ 0.31
Hps3-201ENSMUST00000012580 Frmpd1A2AKB4 1549 aa16.98■□□□□ 0.31
Hps3-201ENSMUST00000012580 Zfp644E9QA22 1323 aa16.97■□□□□ 0.31
Hps3-201ENSMUST00000012580 Supt16hQ920B9 1047 aa16.95■□□□□ 0.3
Hps3-201ENSMUST00000012580 LrpprcQ6PB66 1392 aaKnown RBP16.94■□□□□ 0.3
Hps3-201ENSMUST00000012580 4933416C03RikQ3V063 378 aa16.94■□□□□ 0.3
Hps3-201ENSMUST00000012580 NrkQ9R0G8 1455 aa16.93■□□□□ 0.3
Hps3-201ENSMUST00000012580 Smg6P61406 1418 aaKnown RBP16.93■□□□□ 0.3
Hps3-201ENSMUST00000012580 Tiam1Q60610 1591 aa16.92■□□□□ 0.3
Hps3-201ENSMUST00000012580 Card11Q8CIS0 1159 aa16.91■□□□□ 0.3
Hps3-201ENSMUST00000012580 Mroh2bQ7M6Y6 1581 aa16.9■□□□□ 0.3
Hps3-201ENSMUST00000012580 Rad54l2Q99NG0 1466 aa16.89■□□□□ 0.29
Hps3-201ENSMUST00000012580 Trak1Q6PD31 939 aa16.88■□□□□ 0.29
Hps3-201ENSMUST00000012580 Grin2bQ01097 1482 aa16.88■□□□□ 0.29
Hps3-201ENSMUST00000012580 Rundc1Q0VDN7 615 aa16.88■□□□□ 0.29
Hps3-201ENSMUST00000012580 ArxO35085 564 aa16.87■□□□□ 0.29
Hps3-201ENSMUST00000012580 Mtus2Q3UHD3 1353 aa16.86■□□□□ 0.29
Hps3-201ENSMUST00000012580 Phldb1Q6PDH0 1371 aaKnown RBP16.85■□□□□ 0.29
Hps3-201ENSMUST00000012580 Dhx29Q6PGC1 1365 aaKnown RBP16.85■□□□□ 0.29
Hps3-201ENSMUST00000012580 Fhad1A6PWD2 1420 aa16.84■□□□□ 0.29
Hps3-201ENSMUST00000012580 Usp47Q8BY87 1376 aa16.83■□□□□ 0.29
Hps3-201ENSMUST00000012580 DaxxO35613 739 aa16.83■□□□□ 0.28
Hps3-201ENSMUST00000012580 Pcf11G3X9Z4 1553 aa16.81■□□□□ 0.28
Hps3-201ENSMUST00000012580 Camsap1A2AHC3 1581 aa16.81■□□□□ 0.28
Hps3-201ENSMUST00000012580 Map3k1P53349 1493 aa16.8■□□□□ 0.28
Hps3-201ENSMUST00000012580 3425401B19RikD3Z1D3 1412 aa16.8■□□□□ 0.28
Hps3-201ENSMUST00000012580 Slx4Q6P1D7 1565 aa16.8■□□□□ 0.28
Hps3-201ENSMUST00000012580 Apbb1Q9QXJ1 710 aa16.8■□□□□ 0.28
Hps3-201ENSMUST00000012580 Slc4a2P13808 1237 aaKnown RBP16.79■□□□□ 0.28
Hps3-201ENSMUST00000012580 Cux1P53564 1515 aa16.78■□□□□ 0.28
Hps3-201ENSMUST00000012580 Duox2A2AQ99 1517 aa16.77■□□□□ 0.28
Hps3-201ENSMUST00000012580 Rrp7aQ9D1C9 280 aaKnown RBP16.77■□□□□ 0.28
Hps3-201ENSMUST00000012580 Kdm2aP59997 1161 aa16.77■□□□□ 0.27
Hps3-201ENSMUST00000012580 Polr3glQ8R0C0 218 aa16.76■□□□□ 0.27
Hps3-201ENSMUST00000012580 Rangap1P46061 589 aaKnown RBP16.76■□□□□ 0.27
Hps3-201ENSMUST00000012580 Efcab5A0JP43 1406 aa16.75■□□□□ 0.27
Hps3-201ENSMUST00000012580 Gm13695A2AK44 830 aa16.75■□□□□ 0.27
Hps3-201ENSMUST00000012580 Vps8Q0P5W1 1427 aa16.75■□□□□ 0.27
Hps3-201ENSMUST00000012580 Wdr62Q3U3T8 1523 aa16.75■□□□□ 0.27
Hps3-201ENSMUST00000012580 Ankrd36D3Z4K0 1415 aa16.74■□□□□ 0.27
Hps3-201ENSMUST00000012580 Ankrd26Q811D2 1581 aa16.73■□□□□ 0.27
Hps3-201ENSMUST00000012580 Pak3Q61036 559 aa16.73■□□□□ 0.27
Hps3-201ENSMUST00000012580 Nlrp6Q91WS2 869 aa16.73■□□□□ 0.27
Hps3-201ENSMUST00000012580 Map4P27546 1125 aaKnown RBP16.72■□□□□ 0.27
Hps3-201ENSMUST00000012580 Cwc22Q8C5N3 908 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 185.2 ms