RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Ccer2J3QPU5 274 aa16.69■□□□□ 0.26
Ctr9-201ENSMUST00000005749 Fmn1Q05860 1466 aa16.68■□□□□ 0.26
Ctr9-201ENSMUST00000005749 Smarca2Q6DIC0 1577 aa16.67■□□□□ 0.26
Ctr9-201ENSMUST00000005749 Grwd1Q810D6 446 aaKnown RBP16.66■□□□□ 0.26
Ctr9-201ENSMUST00000005749 CenpbP27790 599 aa16.66■□□□□ 0.26
Ctr9-201ENSMUST00000005749 Nlrp6Q91WS2 869 aa16.64■□□□□ 0.26
Ctr9-201ENSMUST00000005749 NeflP08551 543 aa16.64■□□□□ 0.25
Ctr9-201ENSMUST00000005749 Kdm2aP59997 1161 aa16.64■□□□□ 0.25
Ctr9-201ENSMUST00000005749 Cep162Q6ZQ06 1403 aa16.64■□□□□ 0.25
Ctr9-201ENSMUST00000005749 Aebp1Q640N1 1128 aa16.63■□□□□ 0.25
Ctr9-201ENSMUST00000005749 Clstn2Q9ER65 966 aa16.62■□□□□ 0.25
Ctr9-201ENSMUST00000005749 Ppp1r18Q8BQ30 594 aa16.61■□□□□ 0.25
Ctr9-201ENSMUST00000005749 Rpap1Q80TE0 1409 aa16.6■□□□□ 0.25
Ctr9-201ENSMUST00000005749 Rangap1P46061 589 aaKnown RBP16.6■□□□□ 0.25
Ctr9-201ENSMUST00000005749 Polr3glQ8R0C0 218 aa16.59■□□□□ 0.25
Ctr9-201ENSMUST00000005749 Kif27Q7M6Z4 1394 aa16.58■□□□□ 0.25
Ctr9-201ENSMUST00000005749 Smarca4Q3TKT4 1613 aaKnown RBP16.58■□□□□ 0.25
Ctr9-201ENSMUST00000005749 Baz1bQ9Z277 1479 aa16.57■□□□□ 0.24
Ctr9-201ENSMUST00000005749 MyclP10166 368 aa16.57■□□□□ 0.24
Ctr9-201ENSMUST00000005749 Aebp2Q9Z248 504 aaKnown RBP16.56■□□□□ 0.24
Ctr9-201ENSMUST00000005749 LrpprcQ6PB66 1392 aaKnown RBP16.52■□□□□ 0.24
Ctr9-201ENSMUST00000005749 Dhx29Q6PGC1 1365 aaKnown RBP16.52■□□□□ 0.23
Ctr9-201ENSMUST00000005749 Stk24Q99KH8 431 aa16.51■□□□□ 0.23
Ctr9-201ENSMUST00000005749 Mtus2Q3UHD3 1353 aa16.51■□□□□ 0.23
Ctr9-201ENSMUST00000005749 Hdac5Q9Z2V6 1113 aa16.5■□□□□ 0.23
Ctr9-201ENSMUST00000005749 Tnnt3Q9QZ47 272 aa16.5■□□□□ 0.23
Ctr9-201ENSMUST00000005749 Mroh3A0A1D5RM54 893 aa16.49■□□□□ 0.23
Ctr9-201ENSMUST00000005749 Rapgef2Q8CHG7 1496 aa16.49■□□□□ 0.23
Ctr9-201ENSMUST00000005749 Rad21Q61550 635 aaKnown RBP16.48■□□□□ 0.23
Ctr9-201ENSMUST00000005749 Iqgap2Q3UQ44 1575 aa16.47■□□□□ 0.23
Ctr9-201ENSMUST00000005749 Mrs2Q5NCE8 434 aa16.47■□□□□ 0.23
Ctr9-201ENSMUST00000005749 Hspa5P20029 655 aaKnown RBP16.46■□□□□ 0.23
Ctr9-201ENSMUST00000005749 Cabp1Q9JLK7 227 aa16.46■□□□□ 0.23
Ctr9-201ENSMUST00000005749 Csrnp3P59055 597 aa16.44■□□□□ 0.22
Ctr9-201ENSMUST00000005749 Dnajc5bQ9CQ94 199 aa16.43■□□□□ 0.22
Ctr9-201ENSMUST00000005749 Gm38655A0A286YDK6 273 aa16.42■□□□□ 0.22
Ctr9-201ENSMUST00000005749 Map4P27546 1125 aaKnown RBP16.37■□□□□ 0.21
Ctr9-201ENSMUST00000005749 Gm20521D3Z5F7 333 aa16.36■□□□□ 0.21
Ctr9-201ENSMUST00000005749 Srpk2O54781 681 aaKnown RBP16.35■□□□□ 0.21
Ctr9-201ENSMUST00000005749 NgefQ8CHT1 710 aa16.35■□□□□ 0.21
Ctr9-201ENSMUST00000005749 Trak1Q6PD31 939 aa16.35■□□□□ 0.21
Ctr9-201ENSMUST00000005749 Cttnbp2B9EJA2 1648 aa16.34■□□□□ 0.21
Ctr9-201ENSMUST00000005749 Lemd3Q9WU40 921 aa16.33■□□□□ 0.2
Ctr9-201ENSMUST00000005749 Card11Q8CIS0 1159 aa16.32■□□□□ 0.2
Ctr9-201ENSMUST00000005749 Carmil1Q6EDY6 1374 aa16.32■□□□□ 0.2
Ctr9-201ENSMUST00000005749 Pkd2O35245 966 aa16.31■□□□□ 0.2
Ctr9-201ENSMUST00000005749 Cnga1P29974 684 aa16.3■□□□□ 0.2
Ctr9-201ENSMUST00000005749 Ecm2Q5FW85 670 aa16.3■□□□□ 0.2
Ctr9-201ENSMUST00000005749 MlecQ6ZQI3 291 aaKnown RBP16.28■□□□□ 0.2
Ctr9-201ENSMUST00000005749 WrnO09053 1401 aa16.27■□□□□ 0.2
Ctr9-201ENSMUST00000005749 Pabpn1Q8CCS6 302 aaKnown RBP16.27■□□□□ 0.2
Ctr9-201ENSMUST00000005749 Trim26Q99PN3 545 aa16.27■□□□□ 0.19
Ctr9-201ENSMUST00000005749 Kif3bQ61771 747 aa16.26■□□□□ 0.19
Ctr9-201ENSMUST00000005749 Irx6Q9ER75 438 aa16.26■□□□□ 0.19
Ctr9-201ENSMUST00000005749 Sart1Q9Z315 806 aaKnown RBP16.26■□□□□ 0.19
Ctr9-201ENSMUST00000005749 Exosc9Q9JHI7 438 aaKnown RBP16.26■□□□□ 0.19
Ctr9-201ENSMUST00000005749 Rad54l2Q99NG0 1466 aa16.25■□□□□ 0.19
Ctr9-201ENSMUST00000005749 IqubQ8CDK3 788 aa16.24■□□□□ 0.19
Ctr9-201ENSMUST00000005749 Sin3aQ60520 1274 aaKnown RBP16.24■□□□□ 0.19
Ctr9-201ENSMUST00000005749 Stk26Q99JT2 416 aa16.23■□□□□ 0.19
Ctr9-201ENSMUST00000005749 BicraF8VPZ9 1578 aa16.23■□□□□ 0.19
Ctr9-201ENSMUST00000005749 CntlnA2AM05 1397 aa16.22■□□□□ 0.19
Ctr9-201ENSMUST00000005749 Mia2Q91ZV0 1396 aa16.21■□□□□ 0.19
Ctr9-201ENSMUST00000005749 Stag3O70576 1240 aa16.21■□□□□ 0.19
Ctr9-201ENSMUST00000005749 Fyco1Q8VDC1 1437 aa16.2■□□□□ 0.18
Ctr9-201ENSMUST00000005749 ArxO35085 564 aa16.2■□□□□ 0.18
Ctr9-201ENSMUST00000005749 Mphosph9A6H5Y1 991 aa16.19■□□□□ 0.18
Ctr9-201ENSMUST00000005749 Ccnb3Q810T2 1396 aa16.19■□□□□ 0.18
Ctr9-201ENSMUST00000005749 Ifit1bl1D3Z6F0 470 aa16.19■□□□□ 0.18
Ctr9-201ENSMUST00000005749 Urb2E9Q7L1 1524 aaKnown RBP16.19■□□□□ 0.18
Ctr9-201ENSMUST00000005749 Jph4Q80WT0 628 aa16.18■□□□□ 0.18
Ctr9-201ENSMUST00000005749 Frmpd1A2AKB4 1549 aa16.18■□□□□ 0.18
Ctr9-201ENSMUST00000005749 Arid4bA2CG63 1314 aaKnown RBP16.16■□□□□ 0.18
Ctr9-201ENSMUST00000005749 Soga1E1U8D0 1418 aa16.16■□□□□ 0.18
Ctr9-201ENSMUST00000005749 Rundc1Q0VDN7 615 aa16.12■□□□□ 0.17
Ctr9-201ENSMUST00000005749 Wwc2Q6NXJ0 1187 aa16.12■□□□□ 0.17
Ctr9-201ENSMUST00000005749 Tdrd9Q14BI7 1383 aa16.1■□□□□ 0.17
Ctr9-201ENSMUST00000005749 Znf316Q6PGE4 1016 aa16.09■□□□□ 0.17
Ctr9-201ENSMUST00000005749 Amer1Q7TS75 1132 aa16.09■□□□□ 0.17
Ctr9-201ENSMUST00000005749 Duox2A2AQ99 1517 aa16.08■□□□□ 0.17
Ctr9-201ENSMUST00000005749 Neurod2Q62414 383 aa16.08■□□□□ 0.17
Ctr9-201ENSMUST00000005749 Txndc2Q6P902 515 aa16.08■□□□□ 0.17
Ctr9-201ENSMUST00000005749 Efcab5A0JP43 1406 aa16.08■□□□□ 0.16
Ctr9-201ENSMUST00000005749 Cc2d2aQ8CFW7 1633 aa16.07■□□□□ 0.16
Ctr9-201ENSMUST00000005749 Apbb1Q9QXJ1 710 aa16.07■□□□□ 0.16
Ctr9-201ENSMUST00000005749 Plin1Q8CGN5 517 aa16.05■□□□□ 0.16
Ctr9-201ENSMUST00000005749 Arhgap35Q91YM2 1499 aa16.04■□□□□ 0.16
Ctr9-201ENSMUST00000005749 Nup155Q99P88 1391 aaKnown RBP16.04■□□□□ 0.16
Ctr9-201ENSMUST00000005749 Sox12Q04890 314 aa16.03■□□□□ 0.16
Ctr9-201ENSMUST00000005749 Mrc2Q64449 1479 aa16.03■□□□□ 0.16
Ctr9-201ENSMUST00000005749 Cwc22Q8C5N3 908 aaKnown RBP16.03■□□□□ 0.16
Ctr9-201ENSMUST00000005749 PtprkP35822 1457 aa16.03■□□□□ 0.16
Ctr9-201ENSMUST00000005749 4933416C03RikQ3V063 378 aa16.02■□□□□ 0.16
Ctr9-201ENSMUST00000005749 Calr4Q3TQS0 420 aa16.02■□□□□ 0.15
Ctr9-201ENSMUST00000005749 Ofd1Q80Z25 1017 aa16.02■□□□□ 0.15
Ctr9-201ENSMUST00000005749 Shroom4Q1W617 1475 aa16.01■□□□□ 0.15
Ctr9-201ENSMUST00000005749 Dhx57Q6P5D3 1388 aaKnown RBP16.01■□□□□ 0.15
Ctr9-201ENSMUST00000005749 Psme1P97371 249 aa16■□□□□ 0.15
Ctr9-201ENSMUST00000005749 Plekhh2Q8C115 1491 aa16■□□□□ 0.15
Ctr9-201ENSMUST00000005749 1700019A02RikA0A087WPV9 146 aa15.99■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms