RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Shroom4Q1W617 1475 aa17.01■□□□□ 0.31
Rfx1-201ENSMUST00000005600 Kif15Q6P9L6 1387 aa17■□□□□ 0.31
Rfx1-201ENSMUST00000005600 Tiam1Q60610 1591 aa17■□□□□ 0.31
Rfx1-201ENSMUST00000005600 Map3k1P53349 1493 aa16.99■□□□□ 0.31
Rfx1-201ENSMUST00000005600 Lmod2Q3UHZ5 550 aa16.98■□□□□ 0.31
Rfx1-201ENSMUST00000005600 Pds5bQ4VA53 1446 aaKnown RBP16.98■□□□□ 0.31
Rfx1-201ENSMUST00000005600 Naip1Q9QWK5 1403 aa16.94■□□□□ 0.3
Rfx1-201ENSMUST00000005600 Anp32aO35381 247 aa16.94■□□□□ 0.3
Rfx1-201ENSMUST00000005600 TchhA0A0B4J1F9 1599 aa16.93■□□□□ 0.3
Rfx1-201ENSMUST00000005600 Ccer2J3QPU5 274 aa16.91■□□□□ 0.3
Rfx1-201ENSMUST00000005600 Rpap1Q80TE0 1409 aa16.91■□□□□ 0.3
Rfx1-201ENSMUST00000005600 Ube2uB1AUC4 352 aa16.9■□□□□ 0.3
Rfx1-201ENSMUST00000005600 Lamc3Q9R0B6 1581 aa16.9■□□□□ 0.3
Rfx1-201ENSMUST00000005600 Znf710Q3U288 666 aa16.87■□□□□ 0.29
Rfx1-201ENSMUST00000005600 Gm13697A2AK42 830 aa16.86■□□□□ 0.29
Rfx1-201ENSMUST00000005600 Camsap1A2AHC3 1581 aa16.86■□□□□ 0.29
Rfx1-201ENSMUST00000005600 Frmpd1A2AKB4 1549 aa16.86■□□□□ 0.29
Rfx1-201ENSMUST00000005600 Hspa5P20029 655 aaKnown RBP16.85■□□□□ 0.29
Rfx1-201ENSMUST00000005600 Slc24a1Q91WD8 1130 aa16.85■□□□□ 0.29
Rfx1-201ENSMUST00000005600 AqrQ8CFQ3 1481 aaKnown RBP16.85■□□□□ 0.29
Rfx1-201ENSMUST00000005600 Mroh2bQ7M6Y6 1581 aa16.84■□□□□ 0.29
Rfx1-201ENSMUST00000005600 UacaQ8CGB3 1411 aa16.83■□□□□ 0.29
Rfx1-201ENSMUST00000005600 Mia2Q91ZV0 1396 aa16.83■□□□□ 0.28
Rfx1-201ENSMUST00000005600 Ankrd26Q811D2 1581 aa16.83■□□□□ 0.28
Rfx1-201ENSMUST00000005600 Pcf11G3X9Z4 1553 aa16.82■□□□□ 0.28
Rfx1-201ENSMUST00000005600 Erich3F6QRE9 1637 aa16.82■□□□□ 0.28
Rfx1-201ENSMUST00000005600 Calr4Q3TQS0 420 aa16.82■□□□□ 0.28
Rfx1-201ENSMUST00000005600 Wdr62Q3U3T8 1523 aa16.82■□□□□ 0.28
Rfx1-201ENSMUST00000005600 CntlnA2AM05 1397 aa16.81■□□□□ 0.28
Rfx1-201ENSMUST00000005600 Slx4Q6P1D7 1565 aa16.81■□□□□ 0.28
Rfx1-201ENSMUST00000005600 Grin2bQ01097 1482 aa16.8■□□□□ 0.28
Rfx1-201ENSMUST00000005600 Ankrd36D3Z4K0 1415 aa16.8■□□□□ 0.28
Rfx1-201ENSMUST00000005600 Fyco1Q8VDC1 1437 aa16.79■□□□□ 0.28
Rfx1-201ENSMUST00000005600 Ercc6F8VPZ5 1481 aa16.78■□□□□ 0.28
Rfx1-201ENSMUST00000005600 Fhad1A6PWD2 1420 aa16.78■□□□□ 0.28
Rfx1-201ENSMUST00000005600 Pelp1Q9DBD5 1123 aaKnown RBP16.78■□□□□ 0.28
Rfx1-201ENSMUST00000005600 Carmil1Q6EDY6 1374 aa16.73■□□□□ 0.27
Rfx1-201ENSMUST00000005600 Vps8Q0P5W1 1427 aa16.72■□□□□ 0.27
Rfx1-201ENSMUST00000005600 Rtl5Q5DTT4 599 aa16.72■□□□□ 0.27
Rfx1-201ENSMUST00000005600 Npm1Q61937 292 aaKnown RBP16.71■□□□□ 0.27
Rfx1-201ENSMUST00000005600 PrkcshO08795 521 aa16.7■□□□□ 0.26
Rfx1-201ENSMUST00000005600 3425401B19RikD3Z1D3 1412 aa16.7■□□□□ 0.26
Rfx1-201ENSMUST00000005600 Dhx29Q6PGC1 1365 aaKnown RBP16.69■□□□□ 0.26
Rfx1-201ENSMUST00000005600 Smg6P61406 1418 aaKnown RBP16.67■□□□□ 0.26
Rfx1-201ENSMUST00000005600 Sin3aQ60520 1274 aaKnown RBP16.67■□□□□ 0.26
Rfx1-201ENSMUST00000005600 Eif5bQ05D44 1216 aaKnown RBP16.66■□□□□ 0.26
Rfx1-201ENSMUST00000005600 Lmo7E9PYF4 1699 aaKnown RBP16.66■□□□□ 0.26
Rfx1-201ENSMUST00000005600 Cux1P53564 1515 aa16.65■□□□□ 0.26
Rfx1-201ENSMUST00000005600 Chic2Q9D9G3 165 aa16.64■□□□□ 0.25
Rfx1-201ENSMUST00000005600 Nolc1E9Q5C9 702 aaKnown RBP16.63■□□□□ 0.25
Rfx1-201ENSMUST00000005600 Aebp1Q640N1 1128 aa16.63■□□□□ 0.25
Rfx1-201ENSMUST00000005600 Efcab5A0JP43 1406 aa16.63■□□□□ 0.25
Rfx1-201ENSMUST00000005600 Naip2Q9QUK4 1447 aa16.61■□□□□ 0.25
Rfx1-201ENSMUST00000005600 Camsap2Q8C1B1 1461 aa16.59■□□□□ 0.25
Rfx1-201ENSMUST00000005600 Peg3Q3URU2 1571 aa16.59■□□□□ 0.25
Rfx1-201ENSMUST00000005600 Cux2P70298 1426 aa16.58■□□□□ 0.25
Rfx1-201ENSMUST00000005600 NrdcQ8BHG1 1161 aa16.58■□□□□ 0.25
Rfx1-201ENSMUST00000005600 Unc13aQ4KUS2 1712 aa16.57■□□□□ 0.24
Rfx1-201ENSMUST00000005600 Gm7298A0A0N4SVU1 1476 aa16.57■□□□□ 0.24
Rfx1-201ENSMUST00000005600 Ppp4r2Q0VGB7 417 aa16.57■□□□□ 0.24
Rfx1-201ENSMUST00000005600 Mrs2Q5NCE8 434 aa16.57■□□□□ 0.24
Rfx1-201ENSMUST00000005600 Crocc2F6XLV1 1638 aa16.56■□□□□ 0.24
Rfx1-201ENSMUST00000005600 Wdr43Q6ZQL4 677 aaKnown RBP16.56■□□□□ 0.24
Rfx1-201ENSMUST00000005600 Urb2E9Q7L1 1524 aaKnown RBP16.56■□□□□ 0.24
Rfx1-201ENSMUST00000005600 Ifnlr1Q8CGK5 535 aa16.55■□□□□ 0.24
Rfx1-201ENSMUST00000005600 Naip5Q9R016 1403 aa16.54■□□□□ 0.24
Rfx1-201ENSMUST00000005600 Amer1Q7TS75 1132 aa16.54■□□□□ 0.24
Rfx1-201ENSMUST00000005600 Supt16hQ920B9 1047 aa16.54■□□□□ 0.24
Rfx1-201ENSMUST00000005600 LrpprcQ6PB66 1392 aaKnown RBP16.53■□□□□ 0.24
Rfx1-201ENSMUST00000005600 Ubl4bQ9CQ84 188 aa16.52■□□□□ 0.24
Rfx1-201ENSMUST00000005600 Ncoa2Q61026 1462 aa16.52■□□□□ 0.24
Rfx1-201ENSMUST00000005600 A2mQ6GQT1 1474 aa16.52■□□□□ 0.24
Rfx1-201ENSMUST00000005600 Ccnb3Q810T2 1396 aa16.52■□□□□ 0.23
Rfx1-201ENSMUST00000005600 Gm1043A0A140LJC2 1431 aa16.51■□□□□ 0.23
Rfx1-201ENSMUST00000005600 Polr1aO35134 1717 aaKnown RBP16.5■□□□□ 0.23
Rfx1-201ENSMUST00000005600 Duox2A2AQ99 1517 aa16.49■□□□□ 0.23
Rfx1-201ENSMUST00000005600 PogzQ8BZH4 1409 aaKnown RBP16.47■□□□□ 0.23
Rfx1-201ENSMUST00000005600 Phldb1Q6PDH0 1371 aaKnown RBP16.47■□□□□ 0.23
Rfx1-201ENSMUST00000005600 Mphosph9A6H5Y1 991 aa16.47■□□□□ 0.23
Rfx1-201ENSMUST00000005600 Washc2Q6PGL7 1334 aa16.46■□□□□ 0.23
Rfx1-201ENSMUST00000005600 SynmQ70IV5 1561 aa16.44■□□□□ 0.22
Rfx1-201ENSMUST00000005600 Wwc2Q6NXJ0 1187 aa16.42■□□□□ 0.22
Rfx1-201ENSMUST00000005600 P3h3Q8CG70 732 aa16.42■□□□□ 0.22
Rfx1-201ENSMUST00000005600 Gm13695A2AK44 830 aa16.42■□□□□ 0.22
Rfx1-201ENSMUST00000005600 Cul7Q8VE73 1689 aa16.4■□□□□ 0.22
Rfx1-201ENSMUST00000005600 Kif27Q7M6Z4 1394 aa16.4■□□□□ 0.22
Rfx1-201ENSMUST00000005600 Exoc6Q8R313 802 aa16.39■□□□□ 0.21
Rfx1-201ENSMUST00000005600 Pkd2O35245 966 aa16.38■□□□□ 0.21
Rfx1-201ENSMUST00000005600 Usp47Q8BY87 1376 aa16.37■□□□□ 0.21
Rfx1-201ENSMUST00000005600 Rad54l2Q99NG0 1466 aa16.37■□□□□ 0.21
Rfx1-201ENSMUST00000005600 Slc4a2P13808 1237 aaKnown RBP16.36■□□□□ 0.21
Rfx1-201ENSMUST00000005600 Dennd4bQ3U1Y4 1499 aa16.35■□□□□ 0.21
Rfx1-201ENSMUST00000005600 Pprc1Q6NZN1 1644 aa16.35■□□□□ 0.21
Rfx1-201ENSMUST00000005600 Ncoa1P70365 1447 aa16.35■□□□□ 0.21
Rfx1-201ENSMUST00000005600 Cabp1Q9JLK7 227 aa16.34■□□□□ 0.21
Rfx1-201ENSMUST00000005600 Thoc2B1AZI6 1594 aaKnown RBP16.33■□□□□ 0.21
Rfx1-201ENSMUST00000005600 Samd9lQ69Z37 1561 aa16.33■□□□□ 0.2
Rfx1-201ENSMUST00000005600 Lmtk2Q3TYD6 1471 aa16.33■□□□□ 0.2
Rfx1-201ENSMUST00000005600 Fhod3Q76LL6 1578 aa16.33■□□□□ 0.2
Rfx1-201ENSMUST00000005600 EprsQ8CGC7 1512 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms