RNA–Protein interactions for RNA: ENSMUST00000002683.2

Ccdc97-201, Transcript of Coiled-coil domain-containing protein 97, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc97, Length 3,032 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc97-201ENSMUST00000002683 Ccdc18Q640L5 1455 aa16.57■□□□□ 0.24
Ccdc97-201ENSMUST00000002683 CenpbP27790 599 aa16.55■□□□□ 0.24
Ccdc97-201ENSMUST00000002683 Shroom4Q1W617 1475 aa16.52■□□□□ 0.23
Ccdc97-201ENSMUST00000002683 Kdm5bQ80Y84 1544 aa16.51■□□□□ 0.23
Ccdc97-201ENSMUST00000002683 Map3k1P53349 1493 aa16.49■□□□□ 0.23
Ccdc97-201ENSMUST00000002683 Camsap1A2AHC3 1581 aa16.48■□□□□ 0.23
Ccdc97-201ENSMUST00000002683 Myt1Q8CFC2 1127 aa16.47■□□□□ 0.23
Ccdc97-201ENSMUST00000002683 Eif4g3Q80XI3 1579 aaKnown RBP16.47■□□□□ 0.23
Ccdc97-201ENSMUST00000002683 Npm1Q61937 292 aaKnown RBP16.46■□□□□ 0.23
Ccdc97-201ENSMUST00000002683 Tiam1Q60610 1591 aa16.46■□□□□ 0.23
Ccdc97-201ENSMUST00000002683 Gm38655A0A286YDK6 273 aa16.45■□□□□ 0.22
Ccdc97-201ENSMUST00000002683 BlmO88700 1416 aa16.43■□□□□ 0.22
Ccdc97-201ENSMUST00000002683 TchhA0A0B4J1F9 1599 aa16.41■□□□□ 0.22
Ccdc97-201ENSMUST00000002683 Naip1Q9QWK5 1403 aa16.4■□□□□ 0.22
Ccdc97-201ENSMUST00000002683 Urb2E9Q7L1 1524 aaKnown RBP16.38■□□□□ 0.21
Ccdc97-201ENSMUST00000002683 Mroh2bQ7M6Y6 1581 aa16.38■□□□□ 0.21
Ccdc97-201ENSMUST00000002683 Crocc2F6XLV1 1638 aa16.38■□□□□ 0.21
Ccdc97-201ENSMUST00000002683 Fam50aQ9WV03 339 aaKnown RBP16.37■□□□□ 0.21
Ccdc97-201ENSMUST00000002683 Dhx29Q6PGC1 1365 aaKnown RBP16.37■□□□□ 0.21
Ccdc97-201ENSMUST00000002683 Tnnt3Q9QZ47 272 aa16.37■□□□□ 0.21
Ccdc97-201ENSMUST00000002683 Grin2bQ01097 1482 aa16.37■□□□□ 0.21
Ccdc97-201ENSMUST00000002683 Erich3F6QRE9 1637 aa16.36■□□□□ 0.21
Ccdc97-201ENSMUST00000002683 AqrQ8CFQ3 1481 aaKnown RBP16.35■□□□□ 0.21
Ccdc97-201ENSMUST00000002683 Ankrd26Q811D2 1581 aa16.35■□□□□ 0.21
Ccdc97-201ENSMUST00000002683 LrpprcQ6PB66 1392 aaKnown RBP16.34■□□□□ 0.21
Ccdc97-201ENSMUST00000002683 NclP09405 707 aaKnown RBP16.33■□□□□ 0.2
Ccdc97-201ENSMUST00000002683 Plb1Q3TTY0 1478 aa16.33■□□□□ 0.2
Ccdc97-201ENSMUST00000002683 Hnrnpul2Q00PI9 745 aaKnown RBP16.32■□□□□ 0.2
Ccdc97-201ENSMUST00000002683 Pcf11G3X9Z4 1553 aa16.32■□□□□ 0.2
Ccdc97-201ENSMUST00000002683 Mapk8ip2Q9ERE9 830 aa16.31■□□□□ 0.2
Ccdc97-201ENSMUST00000002683 Slx4Q6P1D7 1565 aa16.31■□□□□ 0.2
Ccdc97-201ENSMUST00000002683 Lmod2Q3UHZ5 550 aa16.3■□□□□ 0.2
Ccdc97-201ENSMUST00000002683 PogzQ8BZH4 1409 aaKnown RBP16.28■□□□□ 0.2
Ccdc97-201ENSMUST00000002683 CntlnA2AM05 1397 aa16.25■□□□□ 0.19
Ccdc97-201ENSMUST00000002683 Rpap1Q80TE0 1409 aa16.24■□□□□ 0.19
Ccdc97-201ENSMUST00000002683 Stra8P70278 393 aa16.23■□□□□ 0.19
Ccdc97-201ENSMUST00000002683 Lmo7E9PYF4 1699 aaKnown RBP16.21■□□□□ 0.19
Ccdc97-201ENSMUST00000002683 SafbD3YXK2 937 aaKnown RBP16.21■□□□□ 0.19
Ccdc97-201ENSMUST00000002683 Ccer2J3QPU5 274 aa16.21■□□□□ 0.19
Ccdc97-201ENSMUST00000002683 Ift140E9PY46 1464 aa16.21■□□□□ 0.18
Ccdc97-201ENSMUST00000002683 UacaQ8CGB3 1411 aa16.2■□□□□ 0.18
Ccdc97-201ENSMUST00000002683 Carmil1Q6EDY6 1374 aa16.2■□□□□ 0.18
Ccdc97-201ENSMUST00000002683 Duox2A2AQ99 1517 aa16.2■□□□□ 0.18
Ccdc97-201ENSMUST00000002683 3425401B19RikD3Z1D3 1412 aa16.19■□□□□ 0.18
Ccdc97-201ENSMUST00000002683 Rusc2Q80U22 1514 aa16.19■□□□□ 0.18
Ccdc97-201ENSMUST00000002683 Mia2Q91ZV0 1396 aa16.19■□□□□ 0.18
Ccdc97-201ENSMUST00000002683 Fyco1Q8VDC1 1437 aa16.19■□□□□ 0.18
Ccdc97-201ENSMUST00000002683 Cux1P53564 1515 aa16.19■□□□□ 0.18
Ccdc97-201ENSMUST00000002683 Shroom2A2ALU4 1481 aa16.18■□□□□ 0.18
Ccdc97-201ENSMUST00000002683 Fhad1A6PWD2 1420 aa16.18■□□□□ 0.18
Ccdc97-201ENSMUST00000002683 Hspa5P20029 655 aaKnown RBP16.18■□□□□ 0.18
Ccdc97-201ENSMUST00000002683 Ankrd36D3Z4K0 1415 aa16.17■□□□□ 0.18
Ccdc97-201ENSMUST00000002683 Gm13697A2AK42 830 aa16.16■□□□□ 0.18
Ccdc97-201ENSMUST00000002683 Efcab5A0JP43 1406 aa16.15■□□□□ 0.18
Ccdc97-201ENSMUST00000002683 Samd9lQ69Z37 1561 aa16.15■□□□□ 0.18
Ccdc97-201ENSMUST00000002683 Setd1bQ8CFT2 1985 aa16.14■□□□□ 0.17
Ccdc97-201ENSMUST00000002683 Znf710Q3U288 666 aa16.13■□□□□ 0.17
Ccdc97-201ENSMUST00000002683 Pbrm1Q8BSQ9 1634 aaKnown RBP16.13■□□□□ 0.17
Ccdc97-201ENSMUST00000002683 DiexfQ8BTT6 772 aaKnown RBP16.13■□□□□ 0.17
Ccdc97-201ENSMUST00000002683 Vps8Q0P5W1 1427 aa16.13■□□□□ 0.17
Ccdc97-201ENSMUST00000002683 Peg3Q3URU2 1571 aa16.12■□□□□ 0.17
Ccdc97-201ENSMUST00000002683 Dnajc5P60904 198 aa16.11■□□□□ 0.17
Ccdc97-201ENSMUST00000002683 Fam71e1A1L3C1 212 aa16.1■□□□□ 0.17
Ccdc97-201ENSMUST00000002683 Ube2uB1AUC4 352 aa16.09■□□□□ 0.17
Ccdc97-201ENSMUST00000002683 Aebp1Q640N1 1128 aa16.09■□□□□ 0.17
Ccdc97-201ENSMUST00000002683 Disp1Q3TDN0 1521 aa16.09■□□□□ 0.17
Ccdc97-201ENSMUST00000002683 Naip2Q9QUK4 1447 aa16.07■□□□□ 0.16
Ccdc97-201ENSMUST00000002683 Gm7298A0A0N4SVU1 1476 aa16.05■□□□□ 0.16
Ccdc97-201ENSMUST00000002683 Gm1043A0A140LJC2 1431 aa16.04■□□□□ 0.16
Ccdc97-201ENSMUST00000002683 Nup160Q9Z0W3 1402 aaKnown RBP16.04■□□□□ 0.16
Ccdc97-201ENSMUST00000002683 SynmQ70IV5 1561 aa16.01■□□□□ 0.15
Ccdc97-201ENSMUST00000002683 Camsap2Q8C1B1 1461 aa16■□□□□ 0.15
Ccdc97-201ENSMUST00000002683 Polr1aO35134 1717 aaKnown RBP16■□□□□ 0.15
Ccdc97-201ENSMUST00000002683 Anp32aO35381 247 aa16■□□□□ 0.15
Ccdc97-201ENSMUST00000002683 Sin3aQ60520 1274 aaKnown RBP15.99■□□□□ 0.15
Ccdc97-201ENSMUST00000002683 Chic2Q9D9G3 165 aa15.99■□□□□ 0.15
Ccdc97-201ENSMUST00000002683 A2mQ6GQT1 1474 aa15.99■□□□□ 0.15
Ccdc97-201ENSMUST00000002683 Gpatch8A2A6A1 1505 aa15.98■□□□□ 0.15
Ccdc97-201ENSMUST00000002683 Cc2d2bA0A286YDU8 1405 aa15.97■□□□□ 0.15
Ccdc97-201ENSMUST00000002683 Magi3Q9EQJ9 1476 aa15.97■□□□□ 0.15
Ccdc97-201ENSMUST00000002683 Smg6P61406 1418 aaKnown RBP15.97■□□□□ 0.15
Ccdc97-201ENSMUST00000002683 Slc24a1Q91WD8 1130 aa15.96■□□□□ 0.15
Ccdc97-201ENSMUST00000002683 Rad54l2Q99NG0 1466 aa15.96■□□□□ 0.15
Ccdc97-201ENSMUST00000002683 Calr4Q3TQS0 420 aa15.96■□□□□ 0.15
Ccdc97-201ENSMUST00000002683 Naip5Q9R016 1403 aa15.96■□□□□ 0.14
Ccdc97-201ENSMUST00000002683 Ccnb3Q810T2 1396 aa15.95■□□□□ 0.14
Ccdc97-201ENSMUST00000002683 Bcl11aQ9QYE3 773 aa15.95■□□□□ 0.14
Ccdc97-201ENSMUST00000002683 Grin2aP35436 1464 aa15.94■□□□□ 0.14
Ccdc97-201ENSMUST00000002683 Col17a1Q07563 1470 aa15.93■□□□□ 0.14
Ccdc97-201ENSMUST00000002683 Ncoa2Q61026 1462 aa15.92■□□□□ 0.14
Ccdc97-201ENSMUST00000002683 Pabpn1Q8CCS6 302 aaKnown RBP15.91■□□□□ 0.14
Ccdc97-201ENSMUST00000002683 Cul7Q8VE73 1689 aa15.91■□□□□ 0.14
Ccdc97-201ENSMUST00000002683 Dennd4bQ3U1Y4 1499 aa15.9■□□□□ 0.14
Ccdc97-201ENSMUST00000002683 Pla2r1Q62028 1487 aa15.88■□□□□ 0.13
Ccdc97-201ENSMUST00000002683 Lmtk2Q3TYD6 1471 aa15.87■□□□□ 0.13
Ccdc97-201ENSMUST00000002683 Mphosph9A6H5Y1 991 aa15.86■□□□□ 0.13
Ccdc97-201ENSMUST00000002683 Fhod3Q76LL6 1578 aa15.85■□□□□ 0.13
Ccdc97-201ENSMUST00000002683 Kif27Q7M6Z4 1394 aa15.84■□□□□ 0.13
Ccdc97-201ENSMUST00000002683 EprsQ8CGC7 1512 aaKnown RBP15.84■□□□□ 0.13
Ccdc97-201ENSMUST00000002683 Zcchc11B2RX14 1644 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms