RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 SOCS3O14543 225 aa6.76□□□□□ -1.33
PHGDH-212ENST00000641247 IGLV2-8P01709 118 aa6.76□□□□□ -1.33
PHGDH-212ENST00000641247 CAMPP49913 170 aa6.76□□□□□ -1.33
PHGDH-212ENST00000641247 GAGE5Q13069 117 aa6.76□□□□□ -1.33
PHGDH-212ENST00000641247 GAGE6Q13070 117 aa6.76□□□□□ -1.33
PHGDH-212ENST00000641247 GAGE13Q4V321 117 aa6.76□□□□□ -1.33
PHGDH-212ENST00000641247 IGFL4Q6B9Z1 124 aa6.76□□□□□ -1.33
PHGDH-212ENST00000641247 C2orf91Q6ZV80 131 aa6.76□□□□□ -1.33
PHGDH-212ENST00000641247 GOLT1AQ6ZVE7 132 aa6.76□□□□□ -1.33
PHGDH-212ENST00000641247 IGHV3OR16-12A0A075B7B8 117 aa6.75□□□□□ -1.33
PHGDH-212ENST00000641247 TSPAN13O95857 204 aa6.75□□□□□ -1.33
PHGDH-212ENST00000641247 PRM2P04554 102 aa6.75□□□□□ -1.33
PHGDH-212ENST00000641247 KRTAP10-1P60331 282 aa6.75□□□□□ -1.33
PHGDH-212ENST00000641247 GDF5OSQ5U4N7 250 aa6.75□□□□□ -1.33
PHGDH-212ENST00000641247 RNF182Q8N6D2 247 aa6.75□□□□□ -1.33
PHGDH-212ENST00000641247 TMEM75Q8N9X5 138 aa6.75□□□□□ -1.33
PHGDH-212ENST00000641247 GTSF1Q8WW33 167 aa6.75□□□□□ -1.33
PHGDH-212ENST00000641247 CLUHP3Q96NS8 147 aa6.75□□□□□ -1.33
PHGDH-212ENST00000641247 TRAV26-1A0A087WT03 109 aa6.74□□□□□ -1.33
PHGDH-212ENST00000641247 TEX48A0A1B0GUV7 120 aa6.74□□□□□ -1.33
PHGDH-212ENST00000641247 RBAKDNA6NC62 111 aa6.74□□□□□ -1.33
PHGDH-212ENST00000641247 ATP5LO75964 103 aa6.74□□□□□ -1.33
PHGDH-212ENST00000641247 LTAP01374 205 aa6.74□□□□□ -1.33
PHGDH-212ENST00000641247 IGLV2-11P01706 119 aa6.74□□□□□ -1.33
PHGDH-212ENST00000641247 ID1P41134 155 aa6.74□□□□□ -1.33
PHGDH-212ENST00000641247 HAMPP81172 84 aa6.74□□□□□ -1.33
PHGDH-212ENST00000641247 C1orf158Q8N1D5 194 aa6.74□□□□□ -1.33
PHGDH-212ENST00000641247 TM2D2Q9BX73 214 aa6.74□□□□□ -1.33
PHGDH-212ENST00000641247 Q9H8V8 135 aa6.74□□□□□ -1.33
PHGDH-212ENST00000641247 SPANXB1Q9NS25 103 aaPredicted RBP6.74□□□□□ -1.33
PHGDH-212ENST00000641247 SRRM2Q9UQ35 2752 aaKnown RBP6.74□□□□□ -1.33
PHGDH-212ENST00000641247 IGKV2-40A0A087WW87 121 aaPredicted RBP6.73□□□□□ -1.33
PHGDH-212ENST00000641247 TRAV8-1A0A0A6YYK1 113 aa6.73□□□□□ -1.33
PHGDH-212ENST00000641247 A0A1B0GUT8 65 aa6.73□□□□□ -1.33
PHGDH-212ENST00000641247 SMIM9A6NGZ8 99 aa6.73□□□□□ -1.33
PHGDH-212ENST00000641247 PRAC2D3DTV9 90 aa6.73□□□□□ -1.33
PHGDH-212ENST00000641247 E9PLD3 99 aa6.73□□□□□ -1.33
PHGDH-212ENST00000641247 H3BMG7 143 aa6.73□□□□□ -1.33
PHGDH-212ENST00000641247 IGKV2D-40P01614 121 aaPredicted RBP6.73□□□□□ -1.33
PHGDH-212ENST00000641247 HBDP02042 147 aa6.73□□□□□ -1.33
PHGDH-212ENST00000641247 PRNTQ86SH4 94 aa6.73□□□□□ -1.33
PHGDH-212ENST00000641247 Q86TA4 180 aa6.73□□□□□ -1.33
PHGDH-212ENST00000641247 C20orf173Q96LM9 149 aa6.73□□□□□ -1.33
PHGDH-212ENST00000641247 SGK494Q96LW2 274 aa6.73□□□□□ -1.33
PHGDH-212ENST00000641247 ERG28Q9UKR5 140 aa6.73□□□□□ -1.33
PHGDH-212ENST00000641247 PSG8Q9UQ74 426 aa6.73□□□□□ -1.33
PHGDH-212ENST00000641247 IGKV3-20P01619 116 aa6.72□□□□□ -1.33
PHGDH-212ENST00000641247 FGF6P10767 208 aa6.72□□□□□ -1.33
PHGDH-212ENST00000641247 SNRPD3P62318 126 aaKnown RBP6.72□□□□□ -1.33
PHGDH-212ENST00000641247 Q6ZRN7 208 aaPredicted RBP6.72□□□□□ -1.33
PHGDH-212ENST00000641247 C15orf53Q8NAA6 179 aa6.72□□□□□ -1.33
PHGDH-212ENST00000641247 ZNF479Q96JC4 524 aa6.72□□□□□ -1.33
PHGDH-212ENST00000641247 MLST8Q9BVC4 326 aa6.72□□□□□ -1.33
PHGDH-212ENST00000641247 C1QTNF4Q9BXJ3 329 aa6.72□□□□□ -1.33
PHGDH-212ENST00000641247 NPIPB6E9PJ23 425 aa6.71□□□□□ -1.34
PHGDH-212ENST00000641247 SPINK8P0C7L1 97 aa6.71□□□□□ -1.34
PHGDH-212ENST00000641247 PRB4P10163 310 aaPredicted RBP6.71□□□□□ -1.34
PHGDH-212ENST00000641247 DAD1P61803 113 aa6.71□□□□□ -1.34
PHGDH-212ENST00000641247 TWIST1Q15672 202 aa6.71□□□□□ -1.34
PHGDH-212ENST00000641247 C9orf47Q6ZRZ4 202 aa6.71□□□□□ -1.34
PHGDH-212ENST00000641247 IFI27L1Q96BM0 104 aa6.71□□□□□ -1.34
PHGDH-212ENST00000641247 ANAPC13Q9BS18 74 aa6.71□□□□□ -1.34
PHGDH-212ENST00000641247 AGPAT4-IT1Q9H0P7 198 aa6.71□□□□□ -1.34
PHGDH-212ENST00000641247 TRBV20-1A0A075B6N2 111 aa6.7□□□□□ -1.34
PHGDH-212ENST00000641247 C19orf71A6NCJ1 209 aa6.7□□□□□ -1.34
PHGDH-212ENST00000641247 APOMO95445 188 aa6.7□□□□□ -1.34
PHGDH-212ENST00000641247 GCSHP23434 173 aa6.7□□□□□ -1.34
PHGDH-212ENST00000641247 ASIPP42127 132 aa6.7□□□□□ -1.34
PHGDH-212ENST00000641247 ZNF138P52744 262 aa6.7□□□□□ -1.34
PHGDH-212ENST00000641247 ERCC8Q13216 396 aa6.7□□□□□ -1.34
PHGDH-212ENST00000641247 TMEM78Q5T7P6 136 aa6.7□□□□□ -1.34
PHGDH-212ENST00000641247 COX8CQ7Z4L0 72 aa6.7□□□□□ -1.34
PHGDH-212ENST00000641247 CEND1Q8N111 149 aa6.7□□□□□ -1.34
PHGDH-212ENST00000641247 OR8A1Q8NGG7 326 aa6.7□□□□□ -1.34
PHGDH-212ENST00000641247 OR10J6PQ8NGY7 276 aa6.7□□□□□ -1.34
PHGDH-212ENST00000641247 PPDPFLQ8WWR9 84 aa6.7□□□□□ -1.34
PHGDH-212ENST00000641247 RAB37Q96AX2 223 aa6.7□□□□□ -1.34
PHGDH-212ENST00000641247 URB1-AS1Q96HZ7 61 aa6.7□□□□□ -1.34
PHGDH-212ENST00000641247 PGLYRP4Q96LB8 373 aa6.7□□□□□ -1.34
PHGDH-212ENST00000641247 LINC00477Q96M19 166 aa6.7□□□□□ -1.34
PHGDH-212ENST00000641247 KRTAP29-1A8MX34 341 aaPredicted RBP6.69□□□□□ -1.34
PHGDH-212ENST00000641247 M0QXV9 152 aa6.69□□□□□ -1.34
PHGDH-212ENST00000641247 EVI2AP22794 236 aa6.69□□□□□ -1.34
PHGDH-212ENST00000641247 CCL18P55774 89 aa6.69□□□□□ -1.34
PHGDH-212ENST00000641247 ZNF493Q6ZR52 646 aa6.69□□□□□ -1.34
PHGDH-212ENST00000641247 ORMDL3Q8N138 153 aa6.69□□□□□ -1.34
PHGDH-212ENST00000641247 Q8TAT8 98 aa6.69□□□□□ -1.34
PHGDH-212ENST00000641247 NXT2Q9NPJ8 142 aaKnown RBP6.69□□□□□ -1.34
PHGDH-212ENST00000641247 PGPEP1Q9NXJ5 209 aa6.69□□□□□ -1.34
PHGDH-212ENST00000641247 LENEPQ9Y5L5 61 aa6.69□□□□□ -1.34
PHGDH-212ENST00000641247 LRP1Q07954 4544 aaKnown RBP6.68□□□□□ -1.34
PHGDH-212ENST00000641247 TRBV7-9A0A0J9YWB2 115 aa6.68□□□□□ -1.34
PHGDH-212ENST00000641247 A0A1B0GWB2 263 aa6.68□□□□□ -1.34
PHGDH-212ENST00000641247 F5H768 121 aa6.68□□□□□ -1.34
PHGDH-212ENST00000641247 F6UB75 175 aa6.68□□□□□ -1.34
PHGDH-212ENST00000641247 Q6Q795 121 aa6.68□□□□□ -1.34
PHGDH-212ENST00000641247 ZC2HC1AQ96GY0 325 aa6.68□□□□□ -1.34
PHGDH-212ENST00000641247 C8orf49Q96NF6 230 aa6.68□□□□□ -1.34
PHGDH-212ENST00000641247 CHAC1Q9BUX1 264 aa6.68□□□□□ -1.34
PHGDH-212ENST00000641247 TMEM126AQ9H061 195 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms