RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 AVPP01185 164 aa13.16□□□□□ -0.3
SCARB2-223ENST00000640640 DAND5Q8N907 189 aa13.16□□□□□ -0.3
SCARB2-223ENST00000640640 COL4A2P08572 1712 aa13.15□□□□□ -0.3
SCARB2-223ENST00000640640 GAGE12HA6NDE8 117 aa13.15□□□□□ -0.3
SCARB2-223ENST00000640640 SH2D6Q7Z4S9 175 aa13.15□□□□□ -0.3
SCARB2-223ENST00000640640 PSMG3-AS1Q96PY0 264 aa13.15□□□□□ -0.3
SCARB2-223ENST00000640640 C11orf21Q9P2W6 132 aa13.15□□□□□ -0.3
SCARB2-223ENST00000640640 TRAV4A0A0B4J268 109 aa13.15□□□□□ -0.3
SCARB2-223ENST00000640640 RANBP2P49792 3224 aaKnown RBP13.15□□□□□ -0.3
SCARB2-223ENST00000640640 EDA2RQ9HAV5 297 aa13.14□□□□□ -0.31
SCARB2-223ENST00000640640 TEX48A0A1B0GUV7 120 aa13.14□□□□□ -0.31
SCARB2-223ENST00000640640 F8WEM9 126 aa13.14□□□□□ -0.31
SCARB2-223ENST00000640640 SND1-IT1Q9HBX3 110 aa13.14□□□□□ -0.31
SCARB2-223ENST00000640640 IGLV1-40P01703 118 aa13.14□□□□□ -0.31
SCARB2-223ENST00000640640 COX7A2LO14548 114 aa13.14□□□□□ -0.31
SCARB2-223ENST00000640640 ZNF702PQ9H963 129 aa13.14□□□□□ -0.31
SCARB2-223ENST00000640640 HTTP42858 3142 aa13.13□□□□□ -0.31
SCARB2-223ENST00000640640 IGHV3-30-3P0DP02 117 aa13.13□□□□□ -0.31
SCARB2-223ENST00000640640 RMI2Q96E14 147 aa13.13□□□□□ -0.31
SCARB2-223ENST00000640640 C1orf43Q9BWL3 253 aa13.13□□□□□ -0.31
SCARB2-223ENST00000640640 ZMAT4Q9H898 229 aa13.13□□□□□ -0.31
SCARB2-223ENST00000640640 U3KQK5 164 aa13.13□□□□□ -0.31
SCARB2-223ENST00000640640 IGHV1-58A0A0C4DH39 117 aa13.13□□□□□ -0.31
SCARB2-223ENST00000640640 COX7B2Q8TF08 81 aa13.13□□□□□ -0.31
SCARB2-223ENST00000640640 PRO0255Q9UI72 69 aa13.13□□□□□ -0.31
SCARB2-223ENST00000640640 Q6ZUT4 128 aa13.13□□□□□ -0.31
SCARB2-223ENST00000640640 Q9HAA7 133 aa13.13□□□□□ -0.31
SCARB2-223ENST00000640640 TP73-AS1Q9UF72 201 aa13.12□□□□□ -0.31
SCARB2-223ENST00000640640 C5orf42Q9H799 3197 aa13.12□□□□□ -0.31
SCARB2-223ENST00000640640 PRR9Q5T870 116 aa13.12□□□□□ -0.31
SCARB2-223ENST00000640640 ACANP16112 2415 aa13.11□□□□□ -0.31
SCARB2-223ENST00000640640 MRPS12O15235 138 aaKnown RBP13.11□□□□□ -0.31
SCARB2-223ENST00000640640 NEXN-AS1Q8NBZ9 246 aa13.11□□□□□ -0.31
SCARB2-223ENST00000640640 RNASE3P12724 160 aaKnown RBP13.1□□□□□ -0.31
SCARB2-223ENST00000640640 RAI1Q7Z5J4 1906 aaPredicted RBP13.1□□□□□ -0.31
SCARB2-223ENST00000640640 M0QY20 66 aa13.09□□□□□ -0.31
SCARB2-223ENST00000640640 IGHV3-30P01768 117 aa13.09□□□□□ -0.31
SCARB2-223ENST00000640640 IGHV3-33P01772 117 aa13.09□□□□□ -0.31
SCARB2-223ENST00000640640 IGHV3-30-5P0DP03 117 aa13.09□□□□□ -0.31
SCARB2-223ENST00000640640 WFDC2Q14508 124 aa13.09□□□□□ -0.31
SCARB2-223ENST00000640640 HIST2H2BDQ6DRA6 164 aa13.09□□□□□ -0.31
SCARB2-223ENST00000640640 NDUFA11Q86Y39 141 aa13.09□□□□□ -0.31
SCARB2-223ENST00000640640 ANKRD29Q8N6D5 301 aa13.09□□□□□ -0.31
SCARB2-223ENST00000640640 KLLNB2CW77 178 aa13.08□□□□□ -0.31
SCARB2-223ENST00000640640 BAALC-AS2P0C853 105 aa13.08□□□□□ -0.31
SCARB2-223ENST00000640640 CAMK2N2Q96S95 79 aa13.07□□□□□ -0.32
SCARB2-223ENST00000640640 DCANP1Q8TF63 244 aa13.07□□□□□ -0.32
SCARB2-223ENST00000640640 UBL5Q9BZL1 73 aa13.07□□□□□ -0.32
SCARB2-223ENST00000640640 IGKV2D-26A0A0A0MRZ7 120 aa13.06□□□□□ -0.32
SCARB2-223ENST00000640640 LINC01620Q4KN68 170 aa13.06□□□□□ -0.32
SCARB2-223ENST00000640640 NRACQ8N912 160 aa13.06□□□□□ -0.32
SCARB2-223ENST00000640640 INAFM1C9JVW0 142 aa13.06□□□□□ -0.32
SCARB2-223ENST00000640640 F8W735 103 aaPredicted RBP13.06□□□□□ -0.32
SCARB2-223ENST00000640640 TNRC6BQ9UPQ9 1833 aaKnown RBP13.06□□□□□ -0.32
SCARB2-223ENST00000640640 LINC00310P59036 64 aa13.06□□□□□ -0.32
SCARB2-223ENST00000640640 LINC01006Q8NI28 216 aa13.06□□□□□ -0.32
SCARB2-223ENST00000640640 TRBV27A0A0K0K1C4 114 aa13.05□□□□□ -0.32
SCARB2-223ENST00000640640 TINCRA0A1B0GVN0 87 aa13.05□□□□□ -0.32
SCARB2-223ENST00000640640 RPL32P62910 135 aaKnown RBP13.05□□□□□ -0.32
SCARB2-223ENST00000640640 C18orf65Q6ZTR6 163 aa13.05□□□□□ -0.32
SCARB2-223ENST00000640640 LINC00467Q9BRT7 94 aa13.05□□□□□ -0.32
SCARB2-223ENST00000640640 KLK12Q9UKR0 248 aa13.05□□□□□ -0.32
SCARB2-223ENST00000640640 RNASE8Q8TDE3 154 aaKnown RBP13.05□□□□□ -0.32
SCARB2-223ENST00000640640 CNFNQ9BYD5 112 aa13.05□□□□□ -0.32
SCARB2-223ENST00000640640 IGLV4-3A0A075B6K6 122 aa13.05□□□□□ -0.32
SCARB2-223ENST00000640640 GAS8-AS1O95177 125 aa13.05□□□□□ -0.32
SCARB2-223ENST00000640640 TEN1Q86WV5 123 aa13.05□□□□□ -0.32
SCARB2-223ENST00000640640 H0YGX0 51 aa13.04□□□□□ -0.32
SCARB2-223ENST00000640640 CFAP126Q5VTH2 177 aa13.04□□□□□ -0.32
SCARB2-223ENST00000640640 MIR7-3HGQ8N6C7 128 aa13.04□□□□□ -0.32
SCARB2-223ENST00000640640 CDKN2A-AS1Q9UH64 79 aa13.04□□□□□ -0.32
SCARB2-223ENST00000640640 PROK1P58294 105 aa13.03□□□□□ -0.32
SCARB2-223ENST00000640640 KRTAP10-9P60411 292 aa13.03□□□□□ -0.32
SCARB2-223ENST00000640640 HAMPP81172 84 aa13.03□□□□□ -0.32
SCARB2-223ENST00000640640 CCL18P55774 89 aa13.03□□□□□ -0.32
SCARB2-223ENST00000640640 IGHV4-4A0A075B6R2 117 aa13.03□□□□□ -0.32
SCARB2-223ENST00000640640 FAM222AQ5U5X8 452 aa13.03□□□□□ -0.32
SCARB2-223ENST00000640640 TRBV6-5A0A0K0K1A5 114 aa13.03□□□□□ -0.32
SCARB2-223ENST00000640640 ADAMTS20P59510 1910 aa13.02□□□□□ -0.32
SCARB2-223ENST00000640640 TMEM126AQ9H061 195 aa13.02□□□□□ -0.32
SCARB2-223ENST00000640640 ZNF22P17026 224 aaPredicted RBP13.02□□□□□ -0.33
SCARB2-223ENST00000640640 DSCR8Q96T75 97 aa13.02□□□□□ -0.33
SCARB2-223ENST00000640640 ORMDL1Q9P0S3 153 aa13.02□□□□□ -0.33
SCARB2-223ENST00000640640 ANKRD17O75179 2603 aaKnown RBP13.02□□□□□ -0.33
SCARB2-223ENST00000640640 A0A0J9YXY3 114 aa13.01□□□□□ -0.33
SCARB2-223ENST00000640640 C15orf53Q8NAA6 179 aa13.01□□□□□ -0.33
SCARB2-223ENST00000640640 TET2Q6N021 2002 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-223ENST00000640640 CRIP2P52943 208 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-223ENST00000640640 SPAG11BQ08648 103 aa13□□□□□ -0.33
SCARB2-223ENST00000640640 MAPKAPK5-AS1Q8N8E1 139 aa13□□□□□ -0.33
SCARB2-223ENST00000640640 TM2D2Q9BX73 214 aa13□□□□□ -0.33
SCARB2-223ENST00000640640 CHD9Q3L8U1 2897 aa13□□□□□ -0.33
SCARB2-223ENST00000640640 CRYBA4P53673 196 aa13□□□□□ -0.33
SCARB2-223ENST00000640640 SMIM9A6NGZ8 99 aa13□□□□□ -0.33
SCARB2-223ENST00000640640 MRGPRG-AS1Q2M3A8 158 aa13□□□□□ -0.33
SCARB2-223ENST00000640640 NFE4Q86UQ8 179 aa13□□□□□ -0.33
SCARB2-223ENST00000640640 CXCL5P42830 114 aa12.99□□□□□ -0.33
SCARB2-223ENST00000640640 POLR2KP53803 58 aaKnown RBP12.99□□□□□ -0.33
SCARB2-223ENST00000640640 CRYGDP07320 174 aa12.99□□□□□ -0.33
SCARB2-223ENST00000640640 TRAV26-1A0A087WT03 109 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms