RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 RPS10P46783 165 aaKnown RBP12.28□□□□□ -0.44
VPS72-207ENST00000640458 LINC01556Q5JQF7 62 aa12.28□□□□□ -0.44
VPS72-207ENST00000640458 TMEM136Q6ZRR5 245 aa12.28□□□□□ -0.44
VPS72-207ENST00000640458 AMN1Q8IY45 258 aa12.28□□□□□ -0.44
VPS72-207ENST00000640458 C10orf126Q8N4M7 172 aa12.28□□□□□ -0.44
VPS72-207ENST00000640458 KIF25-AS1Q9Y6Z4 181 aa12.28□□□□□ -0.44
VPS72-207ENST00000640458 APCSP02743 223 aa12.27□□□□□ -0.45
VPS72-207ENST00000640458 RAB4AP20338 218 aa12.27□□□□□ -0.45
VPS72-207ENST00000640458 NFE4Q86UQ8 179 aa12.27□□□□□ -0.45
VPS72-207ENST00000640458 MRAP2Q96G30 205 aa12.27□□□□□ -0.45
VPS72-207ENST00000640458 TNFRSF18Q9Y5U5 241 aa12.27□□□□□ -0.45
VPS72-207ENST00000640458 COLCA2A8K830 154 aa12.26□□□□□ -0.45
VPS72-207ENST00000640458 PPP1R17O96001 155 aa12.26□□□□□ -0.45
VPS72-207ENST00000640458 PPBPP02775 128 aa12.26□□□□□ -0.45
VPS72-207ENST00000640458 RAB5AP20339 215 aa12.26□□□□□ -0.45
VPS72-207ENST00000640458 CKS2P33552 79 aa12.26□□□□□ -0.45
VPS72-207ENST00000640458 RPL36AP83881 106 aaKnown RBP12.26□□□□□ -0.45
VPS72-207ENST00000640458 FABP9Q0Z7S8 132 aa12.26□□□□□ -0.45
VPS72-207ENST00000640458 RPL36ALQ969Q0 106 aaKnown RBP12.26□□□□□ -0.45
VPS72-207ENST00000640458 MRPL18Q9H0U6 180 aaKnown RBP12.26□□□□□ -0.45
VPS72-207ENST00000640458 TRBV7-3A0A075B6L6 115 aa12.25□□□□□ -0.45
VPS72-207ENST00000640458 EREGO14944 169 aa12.24□□□□□ -0.45
VPS72-207ENST00000640458 UBE2D3P61077 147 aa12.24□□□□□ -0.45
VPS72-207ENST00000640458 UBE2D2P62837 147 aa12.24□□□□□ -0.45
VPS72-207ENST00000640458 MRPL51Q4U2R6 128 aaKnown RBP12.24□□□□□ -0.45
VPS72-207ENST00000640458 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.24□□□□□ -0.45
VPS72-207ENST00000640458 SUMO4Q6EEV6 95 aa12.23□□□□□ -0.45
VPS72-207ENST00000640458 ORMDL3Q8N138 153 aa12.23□□□□□ -0.45
VPS72-207ENST00000640458 NEXN-AS1Q8NBZ9 246 aa12.23□□□□□ -0.45
VPS72-207ENST00000640458 RNF185Q96GF1 192 aa12.23□□□□□ -0.45
VPS72-207ENST00000640458 UBR4Q5T4S7 5183 aa12.23□□□□□ -0.45
VPS72-207ENST00000640458 IBA57-AS1B1ANH7 110 aa12.22□□□□□ -0.45
VPS72-207ENST00000640458 KRTAP10-1P60331 282 aa12.22□□□□□ -0.45
VPS72-207ENST00000640458 CDPF1Q6NVV7 123 aa12.22□□□□□ -0.45
VPS72-207ENST00000640458 DNAJC30Q96LL9 226 aa12.22□□□□□ -0.45
VPS72-207ENST00000640458 VPS13BQ7Z7G8 4022 aa12.21□□□□□ -0.45
VPS72-207ENST00000640458 D6R8Y8 96 aa12.21□□□□□ -0.45
VPS72-207ENST00000640458 FAM229AH3BQW9 127 aa12.21□□□□□ -0.45
VPS72-207ENST00000640458 IGHV3-30P01768 117 aa12.21□□□□□ -0.45
VPS72-207ENST00000640458 IGHV3-33P01772 117 aa12.21□□□□□ -0.45
VPS72-207ENST00000640458 IGHV3-30-3P0DP02 117 aa12.21□□□□□ -0.45
VPS72-207ENST00000640458 IGHV3-30-5P0DP03 117 aa12.21□□□□□ -0.45
VPS72-207ENST00000640458 NIT2Q9NQR4 276 aa12.21□□□□□ -0.45
VPS72-207ENST00000640458 LAMTOR2Q9Y2Q5 125 aa12.21□□□□□ -0.45
VPS72-207ENST00000640458 TRAV26-2A0A0B4J265 109 aa12.2□□□□□ -0.46
VPS72-207ENST00000640458 M0QY20 66 aa12.2□□□□□ -0.46
VPS72-207ENST00000640458 PRELID3AQ96N28 172 aa12.2□□□□□ -0.46
VPS72-207ENST00000640458 KIAA1644Q3SXP7 199 aa12.19□□□□□ -0.46
VPS72-207ENST00000640458 PHOX2AO14813 284 aa12.18□□□□□ -0.46
VPS72-207ENST00000640458 NCR2O95944 276 aa12.18□□□□□ -0.46
VPS72-207ENST00000640458 TRGC2P03986 189 aa12.18□□□□□ -0.46
VPS72-207ENST00000640458 HAMPP81172 84 aa12.18□□□□□ -0.46
VPS72-207ENST00000640458 Q8N3U1 123 aa12.18□□□□□ -0.46
VPS72-207ENST00000640458 ST20Q9HBF5 79 aa12.18□□□□□ -0.46
VPS72-207ENST00000640458 SMKR1H3BMG3 65 aa12.17□□□□□ -0.46
VPS72-207ENST00000640458 LAGE3Q14657 143 aa12.17□□□□□ -0.46
VPS72-207ENST00000640458 NIT1Q86X76 327 aa12.17□□□□□ -0.46
VPS72-207ENST00000640458 TRBV6-8A0A0A6YYG3 113 aa12.16□□□□□ -0.46
VPS72-207ENST00000640458 TNFRSF6BO95407 300 aa12.16□□□□□ -0.46
VPS72-207ENST00000640458 DAZ4Q86SG3 579 aaKnown RBP12.16□□□□□ -0.46
VPS72-207ENST00000640458 C20orf78Q9BR46 151 aa12.16□□□□□ -0.46
VPS72-207ENST00000640458 MAP1LC3AQ9H492 121 aa12.16□□□□□ -0.46
VPS72-207ENST00000640458 DAZ3Q9NR90 486 aaKnown RBP12.16□□□□□ -0.46
VPS72-207ENST00000640458 A0A087WTM6 91 aa12.15□□□□□ -0.46
VPS72-207ENST00000640458 TRBV6-5A0A0K0K1A5 114 aa12.15□□□□□ -0.46
VPS72-207ENST00000640458 TMEM97Q5BJF2 176 aa12.15□□□□□ -0.46
VPS72-207ENST00000640458 RPL39LQ96EH5 51 aaKnown RBP12.15□□□□□ -0.46
VPS72-207ENST00000640458 CHCHD7Q9BUK0 85 aa12.15□□□□□ -0.46
VPS72-207ENST00000640458 C1orf196B1AJZ1 125 aa12.14□□□□□ -0.47
VPS72-207ENST00000640458 SUMO2P61956 95 aaKnown RBP12.14□□□□□ -0.47
VPS72-207ENST00000640458 ALKBH7Q9BT30 221 aaPredicted RBP12.14□□□□□ -0.47
VPS72-207ENST00000640458 Q9HAA7 133 aa12.14□□□□□ -0.47
VPS72-207ENST00000640458 SDHAF1A6NFY7 115 aa12.13□□□□□ -0.47
VPS72-207ENST00000640458 NPYP01303 97 aa12.13□□□□□ -0.47
VPS72-207ENST00000640458 PMCHP20382 165 aa12.13□□□□□ -0.47
VPS72-207ENST00000640458 NRACQ8N912 160 aa12.13□□□□□ -0.47
VPS72-207ENST00000640458 A0A087WX48 190 aa12.12□□□□□ -0.47
VPS72-207ENST00000640458 TRAV8-3A0A0A6YYJ7 113 aa12.12□□□□□ -0.47
VPS72-207ENST00000640458 VCYO14598 125 aa12.12□□□□□ -0.47
VPS72-207ENST00000640458 TCAPO15273 167 aa12.12□□□□□ -0.47
VPS72-207ENST00000640458 NTM-AS1Q6ZSK4 140 aa12.12□□□□□ -0.47
VPS72-207ENST00000640458 KIR2DL4Q99706 377 aa12.12□□□□□ -0.47
VPS72-207ENST00000640458 PSCAO43653 123 aa12.11□□□□□ -0.47
VPS72-207ENST00000640458 GCSHP23434 173 aa12.11□□□□□ -0.47
VPS72-207ENST00000640458 PRSS3P2Q8NHM4 247 aa12.11□□□□□ -0.47
VPS72-207ENST00000640458 TM2D2Q9BX73 214 aa12.11□□□□□ -0.47
VPS72-207ENST00000640458 NXT2Q9NPJ8 142 aaKnown RBP12.11□□□□□ -0.47
VPS72-207ENST00000640458 LOC389332A0A1B0GUA5 103 aa12.1□□□□□ -0.47
VPS72-207ENST00000640458 LRCOL1A6NCL2 159 aa12.1□□□□□ -0.47
VPS72-207ENST00000640458 I3L3M4 83 aa12.1□□□□□ -0.47
VPS72-207ENST00000640458 GAS8-AS1O95177 125 aa12.1□□□□□ -0.47
VPS72-207ENST00000640458 RAB5BP61020 215 aa12.1□□□□□ -0.47
VPS72-207ENST00000640458 RPL32P62910 135 aaKnown RBP12.1□□□□□ -0.47
VPS72-207ENST00000640458 TMEM70Q9BUB7 260 aa12.1□□□□□ -0.47
VPS72-207ENST00000640458 PRSS47A8MTI9 375 aa12.09□□□□□ -0.47
VPS72-207ENST00000640458 TMEM262E9PQX1 116 aa12.09□□□□□ -0.47
VPS72-207ENST00000640458 PKIAP61925 76 aa12.09□□□□□ -0.47
VPS72-207ENST00000640458 COTL1Q14019 142 aa12.09□□□□□ -0.47
VPS72-207ENST00000640458 CHCHD5Q9BSY4 110 aa12.09□□□□□ -0.47
VPS72-207ENST00000640458 SMIM2Q9BVW6 85 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms