RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 MDFICQ9P1T7 246 aa5.71□□□□□ -1.5
SCARB2-220ENST00000640076 TRAV9-1A0A075B6T8 112 aa5.7□□□□□ -1.5
SCARB2-220ENST00000640076 C1orf196B1AJZ1 125 aa5.7□□□□□ -1.5
SCARB2-220ENST00000640076 ARMS2P0C7Q2 107 aa5.7□□□□□ -1.5
SCARB2-220ENST00000640076 PMAIP1Q13794 54 aa5.7□□□□□ -1.5
SCARB2-220ENST00000640076 COL5A1-AS1Q5SY13 56 aa5.7□□□□□ -1.5
SCARB2-220ENST00000640076 LYZL1Q6UWQ5 148 aa5.7□□□□□ -1.5
SCARB2-220ENST00000640076 SCRT2Q9NQ03 307 aa5.7□□□□□ -1.5
SCARB2-220ENST00000640076 TENM3Q9P273 2699 aa5.7□□□□□ -1.5
SCARB2-220ENST00000640076 TRBV24-1A0A075B6N3 115 aa5.69□□□□□ -1.5
SCARB2-220ENST00000640076 F2Z2F3 143 aa5.69□□□□□ -1.5
SCARB2-220ENST00000640076 SPINK4O60575 86 aa5.69□□□□□ -1.5
SCARB2-220ENST00000640076 C11orf72Q8NBR9 251 aa5.69□□□□□ -1.5
SCARB2-220ENST00000640076 OR10AG1Q8NH19 301 aa5.69□□□□□ -1.5
SCARB2-220ENST00000640076 TMEM101Q96IK0 257 aa5.69□□□□□ -1.5
SCARB2-220ENST00000640076 C9orf85Q96MD7 179 aa5.69□□□□□ -1.5
SCARB2-220ENST00000640076 CNFNQ9BYD5 112 aa5.69□□□□□ -1.5
SCARB2-220ENST00000640076 TIMM8BQ9Y5J9 83 aaPredicted RBP5.69□□□□□ -1.5
SCARB2-220ENST00000640076 MUC21A0A0G2JKD1 596 aa5.69□□□□□ -1.5
SCARB2-220ENST00000640076 MUC21A0A140T8X8 626 aa5.69□□□□□ -1.5
SCARB2-220ENST00000640076 A0A1B0GUT8 65 aa5.69□□□□□ -1.5
SCARB2-220ENST00000640076 COLCA2A8K830 154 aa5.69□□□□□ -1.5
SCARB2-220ENST00000640076 RRN3P1Q2M238 152 aa5.69□□□□□ -1.5
SCARB2-220ENST00000640076 DEFB121Q5J5C9 76 aa5.69□□□□□ -1.5
SCARB2-220ENST00000640076 MRPL54Q6P161 138 aaKnown RBP5.69□□□□□ -1.5
SCARB2-220ENST00000640076 TMEM263Q8WUH6 116 aaKnown RBP5.69□□□□□ -1.5
SCARB2-220ENST00000640076 MEGF8Q7Z7M0 2845 aa5.69□□□□□ -1.5
SCARB2-220ENST00000640076 A0A1B0GXF2 115 aa5.68□□□□□ -1.5
SCARB2-220ENST00000640076 ZNF493Q6ZR52 646 aa5.68□□□□□ -1.5
SCARB2-220ENST00000640076 ATP5L2Q7Z4Y8 100 aa5.68□□□□□ -1.5
SCARB2-220ENST00000640076 C16orf74Q96GX8 76 aa5.68□□□□□ -1.5
SCARB2-220ENST00000640076 PHLDA3Q9Y5J5 127 aa5.68□□□□□ -1.5
SCARB2-220ENST00000640076 PRKDCP78527 4128 aaKnown RBP5.67□□□□□ -1.5
SCARB2-220ENST00000640076 IGHV4-4A0A075B6R2 117 aa5.67□□□□□ -1.5
SCARB2-220ENST00000640076 LOC100131303A0A0U1RQF7 123 aa5.67□□□□□ -1.5
SCARB2-220ENST00000640076 PLAC8L1A1L4L8 177 aa5.67□□□□□ -1.5
SCARB2-220ENST00000640076 NXPH4O95158 308 aa5.67□□□□□ -1.5
SCARB2-220ENST00000640076 SRIP30626 198 aa5.67□□□□□ -1.5
SCARB2-220ENST00000640076 CACNG7P62955 275 aa5.67□□□□□ -1.5
SCARB2-220ENST00000640076 SPANXN1Q5VSR9 72 aa5.67□□□□□ -1.5
SCARB2-220ENST00000640076 SBSPONQ8IVN8 264 aa5.67□□□□□ -1.5
SCARB2-220ENST00000640076 OR5A1Q8NGJ0 315 aa5.67□□□□□ -1.5
SCARB2-220ENST00000640076 PRSS3P2Q8NHM4 247 aa5.67□□□□□ -1.5
SCARB2-220ENST00000640076 M0R381 172 aa5.67□□□□□ -1.5
SCARB2-220ENST00000640076 NTF3P20783 257 aa5.67□□□□□ -1.5
SCARB2-220ENST00000640076 EVI2AP22794 236 aa5.67□□□□□ -1.5
SCARB2-220ENST00000640076 HBBP68871 147 aa5.67□□□□□ -1.5
SCARB2-220ENST00000640076 M0R2P5 195 aa5.66□□□□□ -1.5
SCARB2-220ENST00000640076 MIFP14174 115 aa5.66□□□□□ -1.5
SCARB2-220ENST00000640076 S100A2P29034 98 aa5.66□□□□□ -1.5
SCARB2-220ENST00000640076 DAZ2Q13117 558 aaKnown RBP5.66□□□□□ -1.5
SCARB2-220ENST00000640076 TWIST1Q15672 202 aa5.66□□□□□ -1.5
SCARB2-220ENST00000640076 ZNF876PQ49A33 203 aa5.66□□□□□ -1.5
SCARB2-220ENST00000640076 RASL11AQ6T310 242 aa5.66□□□□□ -1.5
SCARB2-220ENST00000640076 Q8NAQ8 132 aa5.66□□□□□ -1.5
SCARB2-220ENST00000640076 DNAH9Q9NYC9 4486 aa5.66□□□□□ -1.5
SCARB2-220ENST00000640076 HUWE1Q7Z6Z7 4374 aaKnown RBP5.66□□□□□ -1.5
SCARB2-220ENST00000640076 C9JAW5 83 aa5.66□□□□□ -1.5
SCARB2-220ENST00000640076 H7C1H1 209 aa5.66□□□□□ -1.5
SCARB2-220ENST00000640076 PYY3Q5JQD4 70 aa5.66□□□□□ -1.5
SCARB2-220ENST00000640076 TM2D3Q9BRN9 247 aa5.66□□□□□ -1.5
SCARB2-220ENST00000640076 PRO1933Q9H354 126 aa5.66□□□□□ -1.5
SCARB2-220ENST00000640076 NOP10Q9NPE3 64 aaKnown RBP5.66□□□□□ -1.5
SCARB2-220ENST00000640076 NACAE9PAV3 2078 aa5.65□□□□□ -1.5
SCARB2-220ENST00000640076 A0A1B0GWB2 263 aa5.65□□□□□ -1.51
SCARB2-220ENST00000640076 TMEM136Q6ZRR5 245 aa5.65□□□□□ -1.51
SCARB2-220ENST00000640076 STAB2Q8WWQ8 2551 aa5.65□□□□□ -1.51
SCARB2-220ENST00000640076 COL7A1Q02388 2944 aa5.65□□□□□ -1.51
SCARB2-220ENST00000640076 A0A0U1RQV1 116 aa5.64□□□□□ -1.51
SCARB2-220ENST00000640076 DEFB4AO15263 64 aa5.64□□□□□ -1.51
SCARB2-220ENST00000640076 FABP9Q0Z7S8 132 aa5.64□□□□□ -1.51
SCARB2-220ENST00000640076 LGALS9BQ3B8N2 356 aa5.64□□□□□ -1.51
SCARB2-220ENST00000640076 Q6ZTI0 123 aa5.64□□□□□ -1.51
SCARB2-220ENST00000640076 AP1S3Q96PC3 154 aa5.64□□□□□ -1.51
SCARB2-220ENST00000640076 KIR2DL4Q99706 377 aa5.64□□□□□ -1.51
SCARB2-220ENST00000640076 ANAPC13Q9BS18 74 aa5.64□□□□□ -1.51
SCARB2-220ENST00000640076 GNB1LQ9BYB4 327 aa5.64□□□□□ -1.51
SCARB2-220ENST00000640076 GTSF1LQ9H1H1 148 aa5.64□□□□□ -1.51
SCARB2-220ENST00000640076 TRGV1A0A0A0MS02 117 aa5.64□□□□□ -1.51
SCARB2-220ENST00000640076 PRSS2P07478 247 aa5.64□□□□□ -1.51
SCARB2-220ENST00000640076 TRGC1P0CF51 173 aa5.64□□□□□ -1.51
SCARB2-220ENST00000640076 SMIM17P0DL12 118 aa5.64□□□□□ -1.51
SCARB2-220ENST00000640076 RPS10P46783 165 aaKnown RBP5.64□□□□□ -1.51
SCARB2-220ENST00000640076 B9D2Q9BPU9 175 aa5.64□□□□□ -1.51
SCARB2-220ENST00000640076 TMEM191AQ9H0A3 160 aa5.64□□□□□ -1.51
SCARB2-220ENST00000640076 JPT2Q9H910 190 aa5.64□□□□□ -1.51
SCARB2-220ENST00000640076 HLA-DQA1P01909 254 aa5.63□□□□□ -1.51
SCARB2-220ENST00000640076 MT-ND6P03923 174 aa5.63□□□□□ -1.51
SCARB2-220ENST00000640076 FGF6P10767 208 aa5.63□□□□□ -1.51
SCARB2-220ENST00000640076 C14orf178Q8N769 122 aaPredicted RBP5.63□□□□□ -1.51
SCARB2-220ENST00000640076 KIF25-AS1Q9Y6Z4 181 aa5.63□□□□□ -1.51
SCARB2-220ENST00000640076 TRAV8-4A0A0B4J246 113 aa5.62□□□□□ -1.51
SCARB2-220ENST00000640076 A8MWV9 139 aa5.62□□□□□ -1.51
SCARB2-220ENST00000640076 NDUFC2O95298 119 aa5.62□□□□□ -1.51
SCARB2-220ENST00000640076 FAM222AQ5U5X8 452 aa5.62□□□□□ -1.51
SCARB2-220ENST00000640076 FAM104BQ5XKR9 115 aa5.62□□□□□ -1.51
SCARB2-220ENST00000640076 AMN1Q8IY45 258 aa5.62□□□□□ -1.51
SCARB2-220ENST00000640076 LINC00612Q8N6U2 182 aa5.62□□□□□ -1.51
SCARB2-220ENST00000640076 SAMD10Q9BYL1 202 aa5.62□□□□□ -1.51
SCARB2-220ENST00000640076 DPH3P1Q9H4G8 78 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms