RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 HELZP42694 1942 aaKnown RBP0.97□□□□□ -2.25
CCDC7-216ENST00000640058 TCHHQ07283 1943 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 ALPK3Q96L96 1907 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 KDM6BO15054 1643 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 KIF14Q15058 1648 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 PTPN23Q9H3S7 1636 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 A0A087WSZ3 146 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 TRBV7-1A0A0A6YYK4 115 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 TMEM30CPA0ZSE6 113 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 HCG22E2RYF7 251 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 F2Z2F3 143 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 NUPR1O60356 82 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 SIX6O95475 246 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 IGLV1-51P01701 117 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 MIFP14174 115 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 C10orf55Q5SWW7 151 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 TMEM170BQ5T4T1 132 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 ZNF818PQ6ZRF7 136 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 LINC00643Q86TS7 51 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 NDUFA11Q86Y39 141 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 CLECL1Q8IZS7 167 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 FAM19A2Q8N3H0 131 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 C18orf32Q8TCD1 76 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 LIMD2Q9BT23 127 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 PRO1854Q9UHT4 67 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 EFCAB5A4FU69 1503 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 PRDM15P57071 1507 aaPredicted RBP0.97□□□□□ -2.25
CCDC7-216ENST00000640058 LTN1O94822 1766 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 ZFC3H1O60293 1989 aaKnown RBP0.97□□□□□ -2.25
CCDC7-216ENST00000640058 MON2Q7Z3U7 1717 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 MLH3Q9UHC1 1453 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 CLTCQ00610 1675 aaKnown RBP0.97□□□□□ -2.25
CCDC7-216ENST00000640058 ANK1P16157 1881 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 TMEM131LA2VDJ0 1609 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 UNC13BO14795 1591 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 SCN3AQ9NY46 2000 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 SETBP1Q9Y6X0 1596 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 KCPQ6ZWJ8 1503 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 TNS1Q9HBL0 1735 aaKnown RBP0.96□□□□□ -2.26
CCDC7-216ENST00000640058 MYH4Q9Y623 1939 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 TRAV12-1A0A0B4J245 112 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 A0A0G2JND7 137 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 TRBV10-1A0A0K0K1A3 114 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 LOC285095A0A1B0GVY8 99 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 C7orf77A4D0Y5 90 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 ZNF815PA8K554 130 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 SFTA3P0C7M3 94 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 PRB4P10163 310 aaPredicted RBP0.96□□□□□ -2.26
CCDC7-216ENST00000640058 EDDM3BP56851 147 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 MIR22HGQ0VDD5 57 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 WFDC2Q14508 124 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 ZNF56Q15929 161 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 C10orf128Q5T292 105 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 C6orf201Q7Z4U5 140 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 CDC42SE1Q9NRR8 79 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 ORMDL1Q9P0S3 153 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 USP54Q70EL1 1684 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 ROBO1Q9Y6N7 1651 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 CFAP74Q9C0B2 1584 aa0.96□□□□□ -2.26
CCDC7-216ENST00000640058 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.95□□□□□ -2.26
CCDC7-216ENST00000640058 CUX1P39880 1505 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 URB2Q14146 1524 aaKnown RBP0.95□□□□□ -2.26
CCDC7-216ENST00000640058 LRRC9Q6ZRR7 1453 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 NRXN1Q9ULB1 1477 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 IGKV3-7A0A075B6H7 116 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 TRBV7-3A0A075B6L6 115 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 IGKV2-40A0A087WW87 121 aaPredicted RBP0.95□□□□□ -2.26
CCDC7-216ENST00000640058 TRAV12-3A0A0B4J271 114 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 A0A1B0GWA3 101 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 CHKB-CPT1BH3BT56 60 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 DNAL4O96015 105 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 IGKV2D-40P01614 121 aaPredicted RBP0.95□□□□□ -2.26
CCDC7-216ENST00000640058 KLKP1Q107X0 134 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 ZCCHC23Q6ZST2 131 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 Q8N6K4 173 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 PPP1R1CQ8WVI7 109 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 DMAC1Q96GE9 116 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 FAM167A-AS1Q96KT0 104 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 AMELYQ99218 206 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 GNG13Q9P2W3 67 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 C22orf24Q9Y442 160 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 MCM3APO60318 1980 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 KIDINS220Q9ULH0 1771 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 TIAM1Q13009 1591 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 DIP2BQ9P265 1576 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 KNDC1Q76NI1 1749 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 NWD2Q9ULI1 1742 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 MGAMO43451 1857 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 PLXNA4Q9HCM2 1894 aa0.95□□□□□ -2.26
CCDC7-216ENST00000640058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.94□□□□□ -2.26
CCDC7-216ENST00000640058 TNRC6BQ9UPQ9 1833 aaKnown RBP0.94□□□□□ -2.26
CCDC7-216ENST00000640058 NKTRP30414 1462 aaKnown RBP0.94□□□□□ -2.26
CCDC7-216ENST00000640058 PREX2Q70Z35 1606 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 MYO3AQ8NEV4 1616 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 RGPD8O14715 1765 aaPredicted RBP0.94□□□□□ -2.26
CCDC7-216ENST00000640058 RGPD5Q99666 1765 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 TRBV25-1A0A075B6N4 114 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 A0A0D9SFI3 127 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 CEBPZOSA8MTT3 80 aa0.94□□□□□ -2.26
CCDC7-216ENST00000640058 HIGD1CA8MV81 97 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms