RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 IGLV1-44P01699 117 aa11.65□□□□□ -0.54
UBE3A-227ENST00000638011 RNF185Q96GF1 192 aa11.65□□□□□ -0.54
UBE3A-227ENST00000638011 PIEZO1Q92508 2521 aa11.65□□□□□ -0.54
UBE3A-227ENST00000638011 LOXP28300 417 aaPredicted RBP11.65□□□□□ -0.54
UBE3A-227ENST00000638011 IGLV3-9A0A075B6K5 115 aa11.65□□□□□ -0.54
UBE3A-227ENST00000638011 K7EMT4 169 aa11.65□□□□□ -0.54
UBE3A-227ENST00000638011 Q6ZQT7 251 aa11.65□□□□□ -0.55
UBE3A-227ENST00000638011 IGLV11-55A0A075B6I3 123 aa11.64□□□□□ -0.55
UBE3A-227ENST00000638011 C19orf71A6NCJ1 209 aa11.64□□□□□ -0.55
UBE3A-227ENST00000638011 COL8A2P25067 703 aa11.64□□□□□ -0.55
UBE3A-227ENST00000638011 COX17Q14061 63 aa11.64□□□□□ -0.55
UBE3A-227ENST00000638011 TRIAP1O43715 76 aa11.63□□□□□ -0.55
UBE3A-227ENST00000638011 M0QXV9 152 aa11.63□□□□□ -0.55
UBE3A-227ENST00000638011 RNF144BQ7Z419 303 aa11.63□□□□□ -0.55
UBE3A-227ENST00000638011 PRO0628Q9UI54 55 aa11.63□□□□□ -0.55
UBE3A-227ENST00000638011 LYPD6Q86Y78 171 aa11.63□□□□□ -0.55
UBE3A-227ENST00000638011 NCR3O14931 201 aa11.63□□□□□ -0.55
UBE3A-227ENST00000638011 LINC00526Q96FQ7 95 aa11.63□□□□□ -0.55
UBE3A-227ENST00000638011 Q9HAA7 133 aa11.63□□□□□ -0.55
UBE3A-227ENST00000638011 LINC00694P0DN24 101 aa11.63□□□□□ -0.55
UBE3A-227ENST00000638011 CFAP126Q5VTH2 177 aa11.63□□□□□ -0.55
UBE3A-227ENST00000638011 TMEM89A2RUT3 159 aa11.63□□□□□ -0.55
UBE3A-227ENST00000638011 CCL24O00175 119 aa11.63□□□□□ -0.55
UBE3A-227ENST00000638011 Q6JHZ5 121 aa11.62□□□□□ -0.55
UBE3A-227ENST00000638011 I3L2K1 104 aa11.62□□□□□ -0.55
UBE3A-227ENST00000638011 C9orf66Q5T8R8 295 aa11.62□□□□□ -0.55
UBE3A-227ENST00000638011 NEXN-AS1Q8NBZ9 246 aa11.62□□□□□ -0.55
UBE3A-227ENST00000638011 IGHV3-33P01772 117 aa11.62□□□□□ -0.55
UBE3A-227ENST00000638011 TRBV27A0A0K0K1C4 114 aa11.61□□□□□ -0.55
UBE3A-227ENST00000638011 IGKV1-17P01599 117 aa11.61□□□□□ -0.55
UBE3A-227ENST00000638011 K7EIM0 57 aa11.61□□□□□ -0.55
UBE3A-227ENST00000638011 LST1O00453 97 aa11.61□□□□□ -0.55
UBE3A-227ENST00000638011 DHRS4-AS1Q9P1J3 65 aa11.61□□□□□ -0.55
UBE3A-227ENST00000638011 IGLV10-54A0A075B6I4 117 aa11.61□□□□□ -0.55
UBE3A-227ENST00000638011 CCKP06307 115 aa11.61□□□□□ -0.55
UBE3A-227ENST00000638011 TPSG1Q9NRR2 321 aa11.6□□□□□ -0.55
UBE3A-227ENST00000638011 NFE4Q86UQ8 179 aa11.6□□□□□ -0.55
UBE3A-227ENST00000638011 CCDC179H3BU77 68 aa11.6□□□□□ -0.55
UBE3A-227ENST00000638011 GPHB5Q86YW7 130 aa11.59□□□□□ -0.55
UBE3A-227ENST00000638011 CLUHP3Q96NS8 147 aa11.59□□□□□ -0.55
UBE3A-227ENST00000638011 LINC00308Q8TCZ7 52 aa11.59□□□□□ -0.55
UBE3A-227ENST00000638011 UBE2D4Q9Y2X8 147 aa11.59□□□□□ -0.55
UBE3A-227ENST00000638011 LOXL1Q08397 574 aaPredicted RBP11.58□□□□□ -0.56
UBE3A-227ENST00000638011 WFDC10BQ8IUB3 73 aa11.58□□□□□ -0.56
UBE3A-227ENST00000638011 IGFL3Q6UXB1 125 aa11.58□□□□□ -0.56
UBE3A-227ENST00000638011 FAM19A5Q7Z5A7 132 aaPredicted RBP11.58□□□□□ -0.56
UBE3A-227ENST00000638011 A0A0J9YY99 117 aa11.57□□□□□ -0.56
UBE3A-227ENST00000638011 EIF4EBP1Q13541 118 aaPredicted RBP11.57□□□□□ -0.56
UBE3A-227ENST00000638011 ZFAND2AQ8N6M9 145 aa11.57□□□□□ -0.56
UBE3A-227ENST00000638011 SNURFQ9Y675 71 aa11.57□□□□□ -0.56
UBE3A-227ENST00000638011 CTSGP08311 255 aa11.56□□□□□ -0.56
UBE3A-227ENST00000638011 JMJD1CQ15652 2540 aa11.56□□□□□ -0.56
UBE3A-227ENST00000638011 TMEM223A0PJW6 202 aa11.56□□□□□ -0.56
UBE3A-227ENST00000638011 A0A096LPF7 62 aa11.56□□□□□ -0.56
UBE3A-227ENST00000638011 ZNRD1Q9P1U0 126 aa11.56□□□□□ -0.56
UBE3A-227ENST00000638011 U3KQK5 164 aa11.56□□□□□ -0.56
UBE3A-227ENST00000638011 ZNF706Q9Y5V0 76 aaPredicted RBP11.55□□□□□ -0.56
UBE3A-227ENST00000638011 RUSC1-AS1Q66K80 236 aa11.55□□□□□ -0.56
UBE3A-227ENST00000638011 LIMD2Q9BT23 127 aa11.55□□□□□ -0.56
UBE3A-227ENST00000638011 C9orf85Q96MD7 179 aa11.55□□□□□ -0.56
UBE3A-227ENST00000638011 DEFB112Q30KQ8 113 aa11.55□□□□□ -0.56
UBE3A-227ENST00000638011 CSDC2Q9Y534 153 aaKnown RBP11.55□□□□□ -0.56
UBE3A-227ENST00000638011 Q6ZR03 302 aa11.54□□□□□ -0.56
UBE3A-227ENST00000638011 WFDC10AQ9H1F0 79 aa11.54□□□□□ -0.56
UBE3A-227ENST00000638011 Q0VFX4 171 aa11.54□□□□□ -0.56
UBE3A-227ENST00000638011 IGHV3-30P01768 117 aa11.54□□□□□ -0.56
UBE3A-227ENST00000638011 IGHV3-30-5P0DP03 117 aa11.54□□□□□ -0.56
UBE3A-227ENST00000638011 HRCT1Q6UXD1 115 aa11.54□□□□□ -0.56
UBE3A-227ENST00000638011 A0A0J9YX75 114 aa11.54□□□□□ -0.56
UBE3A-227ENST00000638011 USP9YO00507 2555 aaPredicted RBP11.54□□□□□ -0.56
UBE3A-227ENST00000638011 PRO0255Q9UI72 69 aa11.54□□□□□ -0.56
UBE3A-227ENST00000638011 PRORYQ9H606 182 aa11.53□□□□□ -0.56
UBE3A-227ENST00000638011 MSRB1Q9NZV6 116 aa11.53□□□□□ -0.56
UBE3A-227ENST00000638011 WT1P19544 449 aaPredicted RBP11.53□□□□□ -0.56
UBE3A-227ENST00000638011 SERTAD4-AS1Q5TG53 156 aa11.53□□□□□ -0.56
UBE3A-227ENST00000638011 PYGO1Q9Y3Y4 419 aa11.53□□□□□ -0.56
UBE3A-227ENST00000638011 CCDC140Q96MF4 163 aa11.53□□□□□ -0.56
UBE3A-227ENST00000638011 NRGNQ92686 78 aa11.52□□□□□ -0.56
UBE3A-227ENST00000638011 INSL3P51460 131 aa11.52□□□□□ -0.56
UBE3A-227ENST00000638011 MRPS12O15235 138 aaKnown RBP11.52□□□□□ -0.57
UBE3A-227ENST00000638011 PRYO14603 147 aa11.52□□□□□ -0.57
UBE3A-227ENST00000638011 XGP55808 180 aa11.51□□□□□ -0.57
UBE3A-227ENST00000638011 IGHV7-81A0A0B4J1V7 117 aa11.51□□□□□ -0.57
UBE3A-227ENST00000638011 Q8N976 141 aa11.5□□□□□ -0.57
UBE3A-227ENST00000638011 TTTY13Q9BZ97 58 aa11.5□□□□□ -0.57
UBE3A-227ENST00000638011 ANKRD11Q6UB99 2663 aaPredicted RBP11.5□□□□□ -0.57
UBE3A-227ENST00000638011 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.5□□□□□ -0.57
UBE3A-227ENST00000638011 IL17DQ8TAD2 202 aa11.5□□□□□ -0.57
UBE3A-227ENST00000638011 CXCL6P80162 114 aa11.49□□□□□ -0.57
UBE3A-227ENST00000638011 Q6ZSR3 168 aa11.49□□□□□ -0.57
UBE3A-227ENST00000638011 RPS28P62857 69 aaKnown RBP11.49□□□□□ -0.57
UBE3A-227ENST00000638011 TRBV6-5A0A0K0K1A5 114 aa11.48□□□□□ -0.57
UBE3A-227ENST00000638011 KLK12Q9UKR0 248 aa11.48□□□□□ -0.57
UBE3A-227ENST00000638011 ARTNQ5T4W7 220 aa11.48□□□□□ -0.57
UBE3A-227ENST00000638011 LOC107984640A0A0U1RRK4 108 aa11.47□□□□□ -0.57
UBE3A-227ENST00000638011 UBE2D3P61077 147 aa11.47□□□□□ -0.57
UBE3A-227ENST00000638011 C2orf91Q6ZV80 131 aa11.47□□□□□ -0.57
UBE3A-227ENST00000638011 C4orf3Q8WVX3 66 aa11.47□□□□□ -0.57
UBE3A-227ENST00000638011 KRTAP27-1Q3LI81 207 aa11.47□□□□□ -0.57
UBE3A-227ENST00000638011 C1orf158Q8N1D5 194 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms