RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 LINC01547P58512 204 aaPredicted RBP1.37□□□□□ -2.19
TCF4-264ENST00000628391 LINC00315P59091 139 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 OXLD1Q5BKU9 147 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 IGFL4Q6B9Z1 124 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 ATP11AUNQ6ZP68 121 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 FAM19A3Q7Z5A8 133 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 LINC00269Q8N2A0 174 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 Q8N3U1 123 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 PRR26Q8N8Z3 221 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 NKAPP1Q8N9T2 125 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 C9orf106Q8NAJ2 232 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 C11orf72Q8NBR9 251 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 BBC3Q96PG8 261 aaPredicted RBP1.37□□□□□ -2.19
TCF4-264ENST00000628391 RNF5Q99942 180 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 CYP4F30PQ9H0H9 118 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 ESM1Q9NQ30 184 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 SMAD5-AS1Q9Y6J3 95 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 KNTC1P50748 2209 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 SPAG17Q6Q759 2223 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 UNC13CQ8NB66 2214 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 DIDO1Q9BTC0 2240 aaKnown RBP1.36□□□□□ -2.19
TCF4-264ENST00000628391 DOCK7Q96N67 2140 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 IGLV11-55A0A075B6I3 123 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 A0A087WWL8 130 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 TRBV10-1A0A0K0K1A3 114 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 C16orf90A8MZG2 172 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 PRAC2D3DTV9 90 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 C5orf67F2Z3F1 127 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 F8W735 103 aaPredicted RBP1.36□□□□□ -2.19
TCF4-264ENST00000628391 K7EMT4 169 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 M0QY20 66 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 BPY2O14599 106 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 PSPHP1O15172 72 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 IGKV3-15P01624 115 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 RPL11P62913 178 aaKnown RBP1.36□□□□□ -2.19
TCF4-264ENST00000628391 LPAL2Q16609 132 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 DEFB114Q30KQ6 69 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 C19orf54Q5BKX5 351 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 PRR9Q5T870 116 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 C9orf66Q5T8R8 295 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 SERTAD4-AS1Q5TG53 156 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 Q5VV11 94 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 IGFL3Q6UXB1 125 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 Q6ZQT0 140 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 Q75L30 129 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 LINC00337Q8N6G1 96 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 ZFAND2AQ8N6M9 145 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 SPATA3Q8NHX4 192 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 SMIM11BQ8TCY0 68 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 ITLN2Q8WWU7 325 aaPredicted RBP1.36□□□□□ -2.19
TCF4-264ENST00000628391 LIMD2Q9BT23 127 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 Q9H8V8 135 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 SND1-IT1Q9HBX3 110 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 CDC42SE1Q9NRR8 79 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 ZNRD1Q9P1U0 126 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 MYO7AQ13402 2215 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 ZNF407Q9C0G0 2248 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 NACAE9PAV3 2078 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 VCANP13611 3396 aa1.36□□□□□ -2.19
TCF4-264ENST00000628391 IGKV2-28A0A075B6P5 120 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 TRBV6-8A0A0A6YYG3 113 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 LCE6AA0A183 80 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 SMIM1B2RUZ4 78 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 HCG22E2RYF7 251 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 F5H697 171 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 CHKB-CPT1BH3BT56 60 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 K7EQG2 157 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 GNRH2O43555 120 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 PSCAO43653 123 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 NDUFB1O75438 58 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 LY6HO94772 140 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 IGKV2D-28P01615 120 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 IGLV1-44P01699 117 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 APELAP0DMC3 54 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 CCL3L1P16619 93 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 IGHV1-2P23083 117 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 HAMPP81172 84 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 DEFB103AP81534 67 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 MRPS21P82921 87 aaKnown RBP1.35□□□□□ -2.19
TCF4-264ENST00000628391 DEFB133Q30KQ1 61 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 ASB16-AS1Q495Z4 193 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 LINC01554Q52M75 96 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 FAM74A4Q5TZK3 123 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 LINC01356Q8N9X3 169 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 C1orf64Q8NEQ6 169 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 FAM104AQ969W3 186 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 Q9BRP9 147 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 OCR1Q9BZK8 76 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 RNF186Q9NXI6 227 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 CDKN2A-AS1Q9UH64 79 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 PRR14LQ5THK1 2151 aa1.35□□□□□ -2.19
TCF4-264ENST00000628391 INTS1Q8N201 2190 aaKnown RBP1.35□□□□□ -2.19
TCF4-264ENST00000628391 ZFHX4Q86UP3 3567 aa1.34□□□□□ -2.19
TCF4-264ENST00000628391 TNRC18O15417 2968 aaPredicted RBP1.34□□□□□ -2.19
TCF4-264ENST00000628391 IGLV3-9A0A075B6K5 115 aa1.34□□□□□ -2.19
TCF4-264ENST00000628391 IGHV3-72A0A0B4J1Y9 119 aa1.34□□□□□ -2.19
TCF4-264ENST00000628391 IGHV3-38A0A0C4DH36 116 aa1.34□□□□□ -2.19
TCF4-264ENST00000628391 LOC101927531A0A1B0GV80 90 aa1.34□□□□□ -2.19
TCF4-264ENST00000628391 PINLYPA6NC86 204 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms