RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 WNK1Q9H4A3 2382 aa9.63□□□□□ -0.87
SCN8A-209ENST00000627620 IL17DQ8TAD2 202 aa9.63□□□□□ -0.87
SCN8A-209ENST00000627620 INAFM1C9JVW0 142 aa9.63□□□□□ -0.87
SCN8A-209ENST00000627620 CRYGBP07316 175 aa9.63□□□□□ -0.87
SCN8A-209ENST00000627620 ZNF295-AS1Q8N0V1 137 aa9.63□□□□□ -0.87
SCN8A-209ENST00000627620 LYRM9A8MSI8 78 aa9.63□□□□□ -0.87
SCN8A-209ENST00000627620 GDF5OSQ5U4N7 250 aa9.62□□□□□ -0.87
SCN8A-209ENST00000627620 OBSL1O75147 1896 aa9.62□□□□□ -0.87
SCN8A-209ENST00000627620 SMIM9A6NGZ8 99 aa9.62□□□□□ -0.87
SCN8A-209ENST00000627620 DENND4AQ7Z401 1863 aa9.62□□□□□ -0.87
SCN8A-209ENST00000627620 MLST8Q9BVC4 326 aa9.62□□□□□ -0.87
SCN8A-209ENST00000627620 A0A0J9YXY3 114 aa9.62□□□□□ -0.87
SCN8A-209ENST00000627620 EIF4EBP1Q13541 118 aaPredicted RBP9.62□□□□□ -0.87
SCN8A-209ENST00000627620 UFSP1Q6NVU6 142 aa9.62□□□□□ -0.87
SCN8A-209ENST00000627620 SPATA12Q7Z6I5 190 aa9.62□□□□□ -0.87
SCN8A-209ENST00000627620 B9D2Q9BPU9 175 aa9.62□□□□□ -0.87
SCN8A-209ENST00000627620 LINC00467Q9BRT7 94 aa9.62□□□□□ -0.87
SCN8A-209ENST00000627620 SS18L2Q9UHA2 77 aa9.62□□□□□ -0.87
SCN8A-209ENST00000627620 C14orf177Q52M58 125 aa9.61□□□□□ -0.87
SCN8A-209ENST00000627620 LY6LH3BQJ8 138 aa9.61□□□□□ -0.87
SCN8A-209ENST00000627620 EBI3Q14213 229 aa9.61□□□□□ -0.87
SCN8A-209ENST00000627620 CHCHD10Q8WYQ3 142 aaPredicted RBP9.61□□□□□ -0.87
SCN8A-209ENST00000627620 C14orf132Q9NPU4 83 aa9.61□□□□□ -0.87
SCN8A-209ENST00000627620 IGKV2D-26A0A0A0MRZ7 120 aa9.6□□□□□ -0.87
SCN8A-209ENST00000627620 Q6ZSV7 163 aa9.6□□□□□ -0.87
SCN8A-209ENST00000627620 ARHGAP21Q5T5U3 1957 aa9.6□□□□□ -0.87
SCN8A-209ENST00000627620 TMEM131Q92545 1883 aa9.6□□□□□ -0.87
SCN8A-209ENST00000627620 H0Y9J4 135 aa9.6□□□□□ -0.87
SCN8A-209ENST00000627620 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
SCN8A-209ENST00000627620 SONP18583 2426 aaKnown RBP9.6□□□□□ -0.87
SCN8A-209ENST00000627620 TNRC6BQ9UPQ9 1833 aaKnown RBP9.6□□□□□ -0.87
SCN8A-209ENST00000627620 PTH2Q96A98 100 aa9.6□□□□□ -0.87
SCN8A-209ENST00000627620 NCOA6Q14686 2063 aaPredicted RBP9.59□□□□□ -0.87
SCN8A-209ENST00000627620 PTPN13Q12923 2485 aa9.59□□□□□ -0.87
SCN8A-209ENST00000627620 DEFB131BA0A096LNP1 70 aa9.59□□□□□ -0.87
SCN8A-209ENST00000627620 CRYGDP07320 174 aa9.59□□□□□ -0.87
SCN8A-209ENST00000627620 HIST2H2BDQ6DRA6 164 aa9.59□□□□□ -0.87
SCN8A-209ENST00000627620 C10orf99Q6UWK7 81 aa9.59□□□□□ -0.87
SCN8A-209ENST00000627620 NEXN-AS1Q8NBZ9 246 aa9.59□□□□□ -0.87
SCN8A-209ENST00000627620 HIGD2AQ9BW72 106 aa9.59□□□□□ -0.87
SCN8A-209ENST00000627620 C11orf71Q6IPW1 123 aa9.59□□□□□ -0.87
SCN8A-209ENST00000627620 PDE6GP18545 87 aa9.58□□□□□ -0.88
SCN8A-209ENST00000627620 HILS1P60008 231 aa9.58□□□□□ -0.88
SCN8A-209ENST00000627620 CDKN2A-AS1Q9UH64 79 aa9.58□□□□□ -0.88
SCN8A-209ENST00000627620 LTBP2Q14767 1821 aa9.58□□□□□ -0.88
SCN8A-209ENST00000627620 LINC00482Q8N8I6 264 aa9.58□□□□□ -0.88
SCN8A-209ENST00000627620 TCL1BO95988 128 aa9.58□□□□□ -0.88
SCN8A-209ENST00000627620 RNASE8Q8TDE3 154 aaKnown RBP9.58□□□□□ -0.88
SCN8A-209ENST00000627620 H7C423 109 aa9.57□□□□□ -0.88
SCN8A-209ENST00000627620 FAM110AQ9BQ89 295 aa9.57□□□□□ -0.88
SCN8A-209ENST00000627620 CFAP126Q5VTH2 177 aa9.57□□□□□ -0.88
SCN8A-209ENST00000627620 RNF183Q96D59 192 aa9.57□□□□□ -0.88
SCN8A-209ENST00000627620 CACNA1AO00555 2505 aa9.57□□□□□ -0.88
SCN8A-209ENST00000627620 PRO3102Q9H379 93 aa9.57□□□□□ -0.88
SCN8A-209ENST00000627620 IGLV4-3A0A075B6K6 122 aa9.56□□□□□ -0.88
SCN8A-209ENST00000627620 ZNF843Q8N446 348 aa9.56□□□□□ -0.88
SCN8A-209ENST00000627620 MBD6Q96DN6 1003 aa9.56□□□□□ -0.88
SCN8A-209ENST00000627620 CRIP1P50238 77 aa9.56□□□□□ -0.88
SCN8A-209ENST00000627620 SPATA25Q9BR10 227 aa9.55□□□□□ -0.88
SCN8A-209ENST00000627620 ZNF22P17026 224 aaPredicted RBP9.55□□□□□ -0.88
SCN8A-209ENST00000627620 SMIM20Q8N5G0 67 aa9.55□□□□□ -0.88
SCN8A-209ENST00000627620 M0QY20 66 aa9.55□□□□□ -0.88
SCN8A-209ENST00000627620 ZNF106Q9H2Y7 1883 aaKnown RBP9.55□□□□□ -0.88
SCN8A-209ENST00000627620 TMEM223A0PJW6 202 aa9.55□□□□□ -0.88
SCN8A-209ENST00000627620 TRBV6-8A0A0A6YYG3 113 aa9.54□□□□□ -0.88
SCN8A-209ENST00000627620 MIFP14174 115 aa9.54□□□□□ -0.88
SCN8A-209ENST00000627620 SHISA2Q6UWI4 295 aa9.54□□□□□ -0.88
SCN8A-209ENST00000627620 PRR14LQ5THK1 2151 aa9.54□□□□□ -0.88
SCN8A-209ENST00000627620 PROK1P58294 105 aa9.54□□□□□ -0.88
SCN8A-209ENST00000627620 DSCAML1Q8TD84 2053 aa9.53□□□□□ -0.88
SCN8A-209ENST00000627620 A0A096LNI7 61 aa9.53□□□□□ -0.88
SCN8A-209ENST00000627620 TRBV6-4A0A1B0GX49 114 aa9.53□□□□□ -0.88
SCN8A-209ENST00000627620 FAM19A1Q7Z5A9 133 aa9.53□□□□□ -0.88
SCN8A-209ENST00000627620 PSMG3-AS1Q96PY0 264 aa9.53□□□□□ -0.88
SCN8A-209ENST00000627620 G3V4G9 280 aa9.53□□□□□ -0.88
SCN8A-209ENST00000627620 BPY2O14599 106 aa9.53□□□□□ -0.88
SCN8A-209ENST00000627620 A0A087WZ39 114 aa9.52□□□□□ -0.88
SCN8A-209ENST00000627620 ZNF702PQ9H963 129 aa9.52□□□□□ -0.88
SCN8A-209ENST00000627620 LY6G6DO95868 133 aa9.52□□□□□ -0.89
SCN8A-209ENST00000627620 PCDH15Q96QU1 1955 aa9.52□□□□□ -0.89
SCN8A-209ENST00000627620 LINC00643Q86TS7 51 aa9.52□□□□□ -0.89
SCN8A-209ENST00000627620 SORL1Q92673 2214 aa9.52□□□□□ -0.89
SCN8A-209ENST00000627620 IBA57-AS1B1ANH7 110 aa9.52□□□□□ -0.89
SCN8A-209ENST00000627620 Q8N976 141 aa9.52□□□□□ -0.89
SCN8A-209ENST00000627620 RNF185Q96GF1 192 aa9.52□□□□□ -0.89
SCN8A-209ENST00000627620 KIAA1549LQ6ZVL6 1849 aa9.51□□□□□ -0.89
SCN8A-209ENST00000627620 LINC00308Q8TCZ7 52 aa9.51□□□□□ -0.89
SCN8A-209ENST00000627620 PIK3CD-AS1Q5SR53 167 aa9.51□□□□□ -0.89
SCN8A-209ENST00000627620 XAGE1AQ9HD64 81 aa9.51□□□□□ -0.89
SCN8A-209ENST00000627620 MED12LQ86YW9 2145 aa9.51□□□□□ -0.89
SCN8A-209ENST00000627620 ALPK3Q96L96 1907 aa9.51□□□□□ -0.89
SCN8A-209ENST00000627620 UPK3BQ9BT76 320 aa9.5□□□□□ -0.89
SCN8A-209ENST00000627620 LRCOL1A6NCL2 159 aa9.5□□□□□ -0.89
SCN8A-209ENST00000627620 BBC3Q96PG8 261 aaPredicted RBP9.5□□□□□ -0.89
SCN8A-209ENST00000627620 Q8N6K4 173 aa9.5□□□□□ -0.89
SCN8A-209ENST00000627620 TRAV23DV6A0A075B6W5 121 aa9.49□□□□□ -0.89
SCN8A-209ENST00000627620 SLPIP03973 132 aa9.49□□□□□ -0.89
SCN8A-209ENST00000627620 IGKV4-1P06312 121 aa9.49□□□□□ -0.89
SCN8A-209ENST00000627620 U3KQK5 164 aa9.49□□□□□ -0.89
SCN8A-209ENST00000627620 IGLV2-11P01706 119 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms