RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 LINC00526Q96FQ7 95 aa6.77□□□□□ -1.33
VCL-206ENST00000623461 USP17L23D6RBM5 183 aa6.77□□□□□ -1.33
VCL-206ENST00000623461 DEFB105AQ8NG35 78 aa6.77□□□□□ -1.33
VCL-206ENST00000623461 AJUBAQ96IF1 538 aa6.77□□□□□ -1.33
VCL-206ENST00000623461 MPLKIPQ8TAP9 179 aa6.77□□□□□ -1.33
VCL-206ENST00000623461 C10orf105Q8TEF2 133 aa6.77□□□□□ -1.33
VCL-206ENST00000623461 TET2Q6N021 2002 aaPredicted RBP6.77□□□□□ -1.33
VCL-206ENST00000623461 A0A0J9YX75 114 aa6.77□□□□□ -1.33
VCL-206ENST00000623461 C1orf195Q5TG92 126 aa6.77□□□□□ -1.33
VCL-206ENST00000623461 TRBV10-1A0A0K0K1A3 114 aa6.76□□□□□ -1.33
VCL-206ENST00000623461 UBE2BP63146 152 aa6.76□□□□□ -1.33
VCL-206ENST00000623461 CLPSL2Q6UWE3 100 aa6.76□□□□□ -1.33
VCL-206ENST00000623461 FAM222AQ5U5X8 452 aa6.76□□□□□ -1.33
VCL-206ENST00000623461 Q6JHZ5 121 aa6.76□□□□□ -1.33
VCL-206ENST00000623461 ENHOQ6UWT2 76 aa6.76□□□□□ -1.33
VCL-206ENST00000623461 URB1-AS1Q96HZ7 61 aa6.76□□□□□ -1.33
VCL-206ENST00000623461 CCDC168Q8NDH2 2452 aa6.76□□□□□ -1.33
VCL-206ENST00000623461 IGLV4-3A0A075B6K6 122 aa6.76□□□□□ -1.33
VCL-206ENST00000623461 SMIM26A0A096LP01 95 aa6.76□□□□□ -1.33
VCL-206ENST00000623461 C5orf56Q8N8D9 126 aa6.76□□□□□ -1.33
VCL-206ENST00000623461 NRACQ8N912 160 aa6.76□□□□□ -1.33
VCL-206ENST00000623461 H7C423 109 aa6.76□□□□□ -1.33
VCL-206ENST00000623461 TIRAPP58753 221 aa6.76□□□□□ -1.33
VCL-206ENST00000623461 A0A0U1RQV1 116 aa6.75□□□□□ -1.33
VCL-206ENST00000623461 ETDCA0A1B0GVM5 59 aa6.75□□□□□ -1.33
VCL-206ENST00000623461 NCR3O14931 201 aa6.75□□□□□ -1.33
VCL-206ENST00000623461 GPHB5Q86YW7 130 aa6.75□□□□□ -1.33
VCL-206ENST00000623461 PYGO1Q9Y3Y4 419 aa6.75□□□□□ -1.33
VCL-206ENST00000623461 Q8N7P7 452 aa6.75□□□□□ -1.33
VCL-206ENST00000623461 RNF223E7ERA6 249 aa6.75□□□□□ -1.33
VCL-206ENST00000623461 TRBV6-5A0A0K0K1A5 114 aa6.75□□□□□ -1.33
VCL-206ENST00000623461 PIK3CD-AS1Q5SR53 167 aa6.75□□□□□ -1.33
VCL-206ENST00000623461 PTPRSQ13332 1948 aa6.75□□□□□ -1.33
VCL-206ENST00000623461 IGFL2Q6UWQ7 119 aa6.75□□□□□ -1.33
VCL-206ENST00000623461 HHLA3Q9XRX5 114 aa6.75□□□□□ -1.33
VCL-206ENST00000623461 SERP1Q9Y6X1 66 aa6.75□□□□□ -1.33
VCL-206ENST00000623461 PTPN13Q12923 2485 aa6.74□□□□□ -1.33
VCL-206ENST00000623461 TMEM89A2RUT3 159 aa6.74□□□□□ -1.33
VCL-206ENST00000623461 PRB1P04280 392 aa6.74□□□□□ -1.33
VCL-206ENST00000623461 C14orf177Q52M58 125 aa6.74□□□□□ -1.33
VCL-206ENST00000623461 BLCAPP62952 87 aa6.74□□□□□ -1.33
VCL-206ENST00000623461 BPY2O14599 106 aa6.74□□□□□ -1.33
VCL-206ENST00000623461 NDUFB1O75438 58 aa6.74□□□□□ -1.33
VCL-206ENST00000623461 UBE2D3P61077 147 aa6.74□□□□□ -1.33
VCL-206ENST00000623461 UBE2D2P62837 147 aa6.74□□□□□ -1.33
VCL-206ENST00000623461 TRBV27A0A0K0K1C4 114 aa6.73□□□□□ -1.33
VCL-206ENST00000623461 CSPG4Q6UVK1 2322 aa6.73□□□□□ -1.33
VCL-206ENST00000623461 IGHV4-4A0A075B6R2 117 aa6.73□□□□□ -1.33
VCL-206ENST00000623461 MUC22E2RYF6 1773 aaPredicted RBP6.73□□□□□ -1.33
VCL-206ENST00000623461 UBE2D1P51668 147 aa6.73□□□□□ -1.33
VCL-206ENST00000623461 CNFNQ9BYD5 112 aa6.73□□□□□ -1.33
VCL-206ENST00000623461 CHKB-CPT1BH3BT56 60 aa6.73□□□□□ -1.33
VCL-206ENST00000623461 NDUFS5O43920 106 aa6.73□□□□□ -1.33
VCL-206ENST00000623461 COX7BP24311 80 aa6.73□□□□□ -1.33
VCL-206ENST00000623461 PCNX3Q9H6A9 2034 aa6.73□□□□□ -1.33
VCL-206ENST00000623461 IBA57-AS1B1ANH7 110 aa6.73□□□□□ -1.33
VCL-206ENST00000623461 IGHV4-28A0A0C4DH34 117 aa6.72□□□□□ -1.33
VCL-206ENST00000623461 CAMK2N2Q96S95 79 aa6.72□□□□□ -1.33
VCL-206ENST00000623461 Q6ZQT7 251 aa6.72□□□□□ -1.33
VCL-206ENST00000623461 C1orf229Q6ZS94 237 aaPredicted RBP6.72□□□□□ -1.33
VCL-206ENST00000623461 ABCA2Q9BZC7 2435 aa6.72□□□□□ -1.33
VCL-206ENST00000623461 KIR2DL5BQ8NHK3 375 aa6.72□□□□□ -1.33
VCL-206ENST00000623461 GYPEP15421 78 aa6.72□□□□□ -1.33
VCL-206ENST00000623461 CEMP1Q6PRD7 247 aaPredicted RBP6.71□□□□□ -1.33
VCL-206ENST00000623461 CDKN2A-AS1Q9UH64 79 aa6.71□□□□□ -1.33
VCL-206ENST00000623461 A0A096LPF7 62 aa6.71□□□□□ -1.34
VCL-206ENST00000623461 VPREB3Q9UKI3 123 aa6.71□□□□□ -1.34
VCL-206ENST00000623461 FAM19A5Q7Z5A7 132 aaPredicted RBP6.71□□□□□ -1.34
VCL-206ENST00000623461 SPTSSBQ8NFR3 76 aa6.71□□□□□ -1.34
VCL-206ENST00000623461 LYRM9A8MSI8 78 aa6.71□□□□□ -1.34
VCL-206ENST00000623461 M0QY20 66 aa6.71□□□□□ -1.34
VCL-206ENST00000623461 WFDC11Q8NEX6 87 aa6.71□□□□□ -1.34
VCL-206ENST00000623461 NRGNQ92686 78 aa6.71□□□□□ -1.34
VCL-206ENST00000623461 CSDC2Q9Y534 153 aaKnown RBP6.71□□□□□ -1.34
VCL-206ENST00000623461 IGHV4OR15-8A0A075B7B6 117 aa6.7□□□□□ -1.34
VCL-206ENST00000623461 A0A087WW49 117 aa6.7□□□□□ -1.34
VCL-206ENST00000623461 HRCT1Q6UXD1 115 aa6.7□□□□□ -1.34
VCL-206ENST00000623461 SEC61GP60059 68 aa6.7□□□□□ -1.34
VCL-206ENST00000623461 Q6ZS46 218 aa6.7□□□□□ -1.34
VCL-206ENST00000623461 APRG1Q8IVJ8 170 aa6.7□□□□□ -1.34
VCL-206ENST00000623461 SMAD5-AS1Q9Y6J3 95 aa6.7□□□□□ -1.34
VCL-206ENST00000623461 ZFAND2AQ8N6M9 145 aa6.7□□□□□ -1.34
VCL-206ENST00000623461 CCDC140Q96MF4 163 aa6.7□□□□□ -1.34
VCL-206ENST00000623461 LINC00467Q9BRT7 94 aa6.69□□□□□ -1.34
VCL-206ENST00000623461 TRAV7A0A075B6U4 112 aa6.69□□□□□ -1.34
VCL-206ENST00000623461 SPART-AS1P0CW21 52 aa6.69□□□□□ -1.34
VCL-206ENST00000623461 MYO18BQ8IUG5 2567 aa6.69□□□□□ -1.34
VCL-206ENST00000623461 NAV3Q8IVL0 2385 aa6.69□□□□□ -1.34
VCL-206ENST00000623461 PRB2P02812 416 aaPredicted RBP6.69□□□□□ -1.34
VCL-206ENST00000623461 ACACBO00763 2458 aa6.69□□□□□ -1.34
VCL-206ENST00000623461 SPAG11BQ08648 103 aa6.69□□□□□ -1.34
VCL-206ENST00000623461 ARHGAP32A7KAX9 2087 aa6.69□□□□□ -1.34
VCL-206ENST00000623461 PCDH15Q96QU1 1955 aa6.68□□□□□ -1.34
VCL-206ENST00000623461 UNQ9165/PRO28630Q6UXU0 137 aa6.68□□□□□ -1.34
VCL-206ENST00000623461 CDIP1Q9H305 208 aa6.68□□□□□ -1.34
VCL-206ENST00000623461 ODF3BA8MYP8 253 aa6.68□□□□□ -1.34
VCL-206ENST00000623461 POLR2KP53803 58 aaKnown RBP6.68□□□□□ -1.34
VCL-206ENST00000623461 CCL24O00175 119 aa6.67□□□□□ -1.34
VCL-206ENST00000623461 MSMPQ1L6U9 139 aa6.67□□□□□ -1.34
VCL-206ENST00000623461 FSTL3O95633 263 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms