RNA–Protein interactions for RNA: ENST00000623196.1

C9orf139-202, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 2 BASIC

Gene C9orf139, Length 4,990 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-202ENST00000623196 TRBV12-3P01733 135 aa11.35□□□□□ -0.59
C9orf139-202ENST00000623196 UNQ9165/PRO28630Q6UXU0 137 aa11.35□□□□□ -0.59
C9orf139-202ENST00000623196 PTPRSQ13332 1948 aa11.34□□□□□ -0.59
C9orf139-202ENST00000623196 TP53TG3Q9ULZ0 132 aa11.34□□□□□ -0.59
C9orf139-202ENST00000623196 ZNF80P51504 273 aaPredicted RBP11.34□□□□□ -0.59
C9orf139-202ENST00000623196 DEFB113Q30KQ7 82 aa11.34□□□□□ -0.59
C9orf139-202ENST00000623196 A0A0J9YXY3 114 aa11.34□□□□□ -0.59
C9orf139-202ENST00000623196 RNF183Q96D59 192 aa11.34□□□□□ -0.59
C9orf139-202ENST00000623196 MLST8Q9BVC4 326 aa11.33□□□□□ -0.6
C9orf139-202ENST00000623196 EML5Q05BV3 1969 aa11.33□□□□□ -0.6
C9orf139-202ENST00000623196 PIEZO2Q9H5I5 2752 aa11.33□□□□□ -0.6
C9orf139-202ENST00000623196 CEMP1Q6PRD7 247 aaPredicted RBP11.33□□□□□ -0.6
C9orf139-202ENST00000623196 NFE4Q86UQ8 179 aa11.33□□□□□ -0.6
C9orf139-202ENST00000623196 TM2D2Q9BX73 214 aa11.33□□□□□ -0.6
C9orf139-202ENST00000623196 ZFP36P26651 326 aaKnown RBP11.33□□□□□ -0.6
C9orf139-202ENST00000623196 UBE2AP49459 152 aa11.33□□□□□ -0.6
C9orf139-202ENST00000623196 C22orf34Q6ZV56 151 aa11.33□□□□□ -0.6
C9orf139-202ENST00000623196 PRO0255Q9UI72 69 aa11.33□□□□□ -0.6
C9orf139-202ENST00000623196 NDUFV3P56181 108 aaKnown RBP11.33□□□□□ -0.6
C9orf139-202ENST00000623196 TMEM263Q8WUH6 116 aaKnown RBP11.32□□□□□ -0.6
C9orf139-202ENST00000623196 TRAV23DV6A0A075B6W5 121 aa11.32□□□□□ -0.6
C9orf139-202ENST00000623196 C10orf142B7Z368 130 aa11.32□□□□□ -0.6
C9orf139-202ENST00000623196 IGLC6P0CF74 106 aa11.32□□□□□ -0.6
C9orf139-202ENST00000623196 COX7BP24311 80 aa11.31□□□□□ -0.6
C9orf139-202ENST00000623196 UQCRQO14949 82 aa11.3□□□□□ -0.6
C9orf139-202ENST00000623196 MT-ATP8P03928 68 aa11.3□□□□□ -0.6
C9orf139-202ENST00000623196 C20orf197Q8N268 126 aa11.3□□□□□ -0.6
C9orf139-202ENST00000623196 BRK1Q8WUW1 75 aa11.3□□□□□ -0.6
C9orf139-202ENST00000623196 BPY2O14599 106 aa11.3□□□□□ -0.6
C9orf139-202ENST00000623196 DEFB135Q30KP9 77 aa11.3□□□□□ -0.6
C9orf139-202ENST00000623196 IGF2-ASQ6U949 168 aa11.3□□□□□ -0.6
C9orf139-202ENST00000623196 MBD6Q96DN6 1003 aa11.3□□□□□ -0.6
C9orf139-202ENST00000623196 TEX49A0A1B0GTD5 131 aa11.29□□□□□ -0.6
C9orf139-202ENST00000623196 SPATA25Q9BR10 227 aa11.29□□□□□ -0.6
C9orf139-202ENST00000623196 SIRPDQ9H106 197 aa11.29□□□□□ -0.6
C9orf139-202ENST00000623196 TANC2Q9HCD6 1990 aa11.29□□□□□ -0.6
C9orf139-202ENST00000623196 MYCNOSP40205 109 aa11.29□□□□□ -0.6
C9orf139-202ENST00000623196 FAM110AQ9BQ89 295 aa11.29□□□□□ -0.6
C9orf139-202ENST00000623196 KIAA1549Q9HCM3 1950 aa11.29□□□□□ -0.6
C9orf139-202ENST00000623196 UPK3BQ9BT76 320 aa11.29□□□□□ -0.6
C9orf139-202ENST00000623196 SPANXB1Q9NS25 103 aaPredicted RBP11.29□□□□□ -0.6
C9orf139-202ENST00000623196 SVIPQ8NHG7 77 aa11.28□□□□□ -0.6
C9orf139-202ENST00000623196 NEXN-AS1Q8NBZ9 246 aa11.28□□□□□ -0.6
C9orf139-202ENST00000623196 BPTFQ12830 3046 aa11.27□□□□□ -0.61
C9orf139-202ENST00000623196 CDKN2A-AS1Q9UH64 79 aa11.27□□□□□ -0.61
C9orf139-202ENST00000623196 DEFB4AO15263 64 aa11.27□□□□□ -0.61
C9orf139-202ENST00000623196 ADORA2A-AS1P86434 159 aa11.27□□□□□ -0.61
C9orf139-202ENST00000623196 UFSP1Q6NVU6 142 aa11.27□□□□□ -0.61
C9orf139-202ENST00000623196 LINC00574Q9H8X3 128 aa11.27□□□□□ -0.61
C9orf139-202ENST00000623196 F8W735 103 aaPredicted RBP11.26□□□□□ -0.61
C9orf139-202ENST00000623196 CCDC140Q96MF4 163 aa11.26□□□□□ -0.61
C9orf139-202ENST00000623196 H0Y9J4 135 aa11.26□□□□□ -0.61
C9orf139-202ENST00000623196 LRP4O75096 1905 aa11.26□□□□□ -0.61
C9orf139-202ENST00000623196 HCFC1P51610 2035 aa11.26□□□□□ -0.61
C9orf139-202ENST00000623196 C4orf3Q8WVX3 66 aa11.26□□□□□ -0.61
C9orf139-202ENST00000623196 PRO3102Q9H379 93 aa11.25□□□□□ -0.61
C9orf139-202ENST00000623196 P0DMU3 169 aa11.25□□□□□ -0.61
C9orf139-202ENST00000623196 FAM231AP0DMU4 169 aa11.25□□□□□ -0.61
C9orf139-202ENST00000623196 FAM231CP0DMU5 169 aa11.25□□□□□ -0.61
C9orf139-202ENST00000623196 ZFAND2AQ8N6M9 145 aa11.25□□□□□ -0.61
C9orf139-202ENST00000623196 ODF3Q96PU9 254 aa11.25□□□□□ -0.61
C9orf139-202ENST00000623196 A6NDX4 124 aa11.24□□□□□ -0.61
C9orf139-202ENST00000623196 ZNF22P17026 224 aaPredicted RBP11.24□□□□□ -0.61
C9orf139-202ENST00000623196 SDIM1Q6ZPB5 146 aa11.24□□□□□ -0.61
C9orf139-202ENST00000623196 MAP6D1Q9H9H5 199 aa11.24□□□□□ -0.61
C9orf139-202ENST00000623196 ATG2AQ2TAZ0 1938 aa11.24□□□□□ -0.61
C9orf139-202ENST00000623196 CEP192Q8TEP8 1941 aa11.24□□□□□ -0.61
C9orf139-202ENST00000623196 C4orf48Q5BLP8 95 aa11.23□□□□□ -0.61
C9orf139-202ENST00000623196 ATP5EP2Q5VTU8 51 aa11.23□□□□□ -0.61
C9orf139-202ENST00000623196 FBXL19-AS1Q494R0 122 aa11.23□□□□□ -0.61
C9orf139-202ENST00000623196 Q6ZTI0 123 aa11.23□□□□□ -0.61
C9orf139-202ENST00000623196 IGLV4-3A0A075B6K6 122 aa11.21□□□□□ -0.61
C9orf139-202ENST00000623196 NRGNQ92686 78 aa11.21□□□□□ -0.61
C9orf139-202ENST00000623196 FAM236DA0A1B0GTK5 79 aa11.21□□□□□ -0.61
C9orf139-202ENST00000623196 FAM236CP0DP71 79 aa11.21□□□□□ -0.61
C9orf139-202ENST00000623196 INSL3P51460 131 aa11.21□□□□□ -0.61
C9orf139-202ENST00000623196 LINC00308Q8TCZ7 52 aa11.21□□□□□ -0.61
C9orf139-202ENST00000623196 TNRC6BQ9UPQ9 1833 aaKnown RBP11.21□□□□□ -0.61
C9orf139-202ENST00000623196 MAPKAPK5-AS1Q8N8E1 139 aa11.21□□□□□ -0.61
C9orf139-202ENST00000623196 TRBV30A0A0K0K1B3 111 aa11.21□□□□□ -0.62
C9orf139-202ENST00000623196 TMEM223A0PJW6 202 aa11.21□□□□□ -0.62
C9orf139-202ENST00000623196 LINC00467Q9BRT7 94 aa11.21□□□□□ -0.62
C9orf139-202ENST00000623196 SEC61GP60059 68 aa11.2□□□□□ -0.62
C9orf139-202ENST00000623196 K7EQG2 157 aa11.2□□□□□ -0.62
C9orf139-202ENST00000623196 TRIAP1O43715 76 aa11.2□□□□□ -0.62
C9orf139-202ENST00000623196 LINC00269Q8N2A0 174 aa11.2□□□□□ -0.62
C9orf139-202ENST00000623196 PIEZO1Q92508 2521 aa11.2□□□□□ -0.62
C9orf139-202ENST00000623196 IBA57-AS1B1ANH7 110 aa11.2□□□□□ -0.62
C9orf139-202ENST00000623196 SPTSSBQ8NFR3 76 aa11.2□□□□□ -0.62
C9orf139-202ENST00000623196 HIGD2AQ9BW72 106 aa11.2□□□□□ -0.62
C9orf139-202ENST00000623196 SMAD5-AS1Q9Y6J3 95 aa11.2□□□□□ -0.62
C9orf139-202ENST00000623196 LINC01548A6NM66 108 aa11.19□□□□□ -0.62
C9orf139-202ENST00000623196 ODF3BA8MYP8 253 aa11.19□□□□□ -0.62
C9orf139-202ENST00000623196 REG3AQ06141 175 aa11.19□□□□□ -0.62
C9orf139-202ENST00000623196 TNFRSF13BO14836 293 aaPredicted RBP11.19□□□□□ -0.62
C9orf139-202ENST00000623196 IGKV4-1P06312 121 aa11.19□□□□□ -0.62
C9orf139-202ENST00000623196 C5orf42Q9H799 3197 aa11.19□□□□□ -0.62
C9orf139-202ENST00000623196 C3orf22Q8N5N4 141 aa11.19□□□□□ -0.62
C9orf139-202ENST00000623196 CPAMD8Q8IZJ3 1885 aa11.18□□□□□ -0.62
C9orf139-202ENST00000623196 LINC00310P59036 64 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms