RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 SMIM26A0A096LP01 95 aa7.52□□□□□ -1.21
COL4A6-210ENST00000621266 A0A1B0GXF2 115 aa7.52□□□□□ -1.21
COL4A6-210ENST00000621266 LINC00322Q6ZN03 302 aaPredicted RBP7.52□□□□□ -1.21
COL4A6-210ENST00000621266 PRO3102Q9H379 93 aa7.52□□□□□ -1.21
COL4A6-210ENST00000621266 CTSZQ9UBR2 303 aa7.52□□□□□ -1.21
COL4A6-210ENST00000621266 GTF3C1Q12789 2109 aa7.52□□□□□ -1.21
COL4A6-210ENST00000621266 IGLV11-55A0A075B6I3 123 aa7.52□□□□□ -1.21
COL4A6-210ENST00000621266 FAM19A3Q7Z5A8 133 aa7.52□□□□□ -1.21
COL4A6-210ENST00000621266 DEFB4AO15263 64 aa7.52□□□□□ -1.21
COL4A6-210ENST00000621266 IGHV4-30-4P0DP06 118 aa7.52□□□□□ -1.21
COL4A6-210ENST00000621266 IGHV4-31P0DP07 118 aa7.52□□□□□ -1.21
COL4A6-210ENST00000621266 C11orf53Q8IXP5 236 aa7.52□□□□□ -1.21
COL4A6-210ENST00000621266 TRBV30A0A0K0K1B3 111 aa7.51□□□□□ -1.21
COL4A6-210ENST00000621266 NEXN-AS1Q8NBZ9 246 aa7.51□□□□□ -1.21
COL4A6-210ENST00000621266 IGHV7-81A0A0B4J1V7 117 aa7.51□□□□□ -1.21
COL4A6-210ENST00000621266 POM121L12Q8N7R1 296 aa7.51□□□□□ -1.21
COL4A6-210ENST00000621266 HIGD2AQ9BW72 106 aa7.51□□□□□ -1.21
COL4A6-210ENST00000621266 IMUPQ9GZP8 106 aa7.51□□□□□ -1.21
COL4A6-210ENST00000621266 MALRD1Q5VYJ5 2156 aa7.51□□□□□ -1.21
COL4A6-210ENST00000621266 TMEM223A0PJW6 202 aa7.51□□□□□ -1.21
COL4A6-210ENST00000621266 F8W735 103 aaPredicted RBP7.51□□□□□ -1.21
COL4A6-210ENST00000621266 WFDC13Q8IUB5 93 aa7.51□□□□□ -1.21
COL4A6-210ENST00000621266 C1orf158Q8N1D5 194 aa7.51□□□□□ -1.21
COL4A6-210ENST00000621266 NANOS2P60321 138 aaKnown RBP7.5□□□□□ -1.21
COL4A6-210ENST00000621266 B9D2Q9BPU9 175 aa7.5□□□□□ -1.21
COL4A6-210ENST00000621266 SPRY4Q9C004 299 aa7.5□□□□□ -1.21
COL4A6-210ENST00000621266 CEP192Q8TEP8 1941 aa7.5□□□□□ -1.21
COL4A6-210ENST00000621266 TMEM131Q92545 1883 aa7.5□□□□□ -1.21
COL4A6-210ENST00000621266 MED13LQ71F56 2210 aa7.5□□□□□ -1.21
COL4A6-210ENST00000621266 Q6Q795 121 aa7.5□□□□□ -1.21
COL4A6-210ENST00000621266 DCANP1Q8TF63 244 aa7.5□□□□□ -1.21
COL4A6-210ENST00000621266 ZGRF1Q86YA3 2104 aa7.5□□□□□ -1.21
COL4A6-210ENST00000621266 CFAP126Q5VTH2 177 aa7.5□□□□□ -1.21
COL4A6-210ENST00000621266 FAM19A5Q7Z5A7 132 aaPredicted RBP7.5□□□□□ -1.21
COL4A6-210ENST00000621266 MED14OSP0DP75 135 aa7.5□□□□□ -1.21
COL4A6-210ENST00000621266 DSCAML1Q8TD84 2053 aa7.49□□□□□ -1.21
COL4A6-210ENST00000621266 ZNF80P51504 273 aaPredicted RBP7.49□□□□□ -1.21
COL4A6-210ENST00000621266 C22orf34Q6ZV56 151 aa7.49□□□□□ -1.21
COL4A6-210ENST00000621266 LINC00308Q8TCZ7 52 aa7.49□□□□□ -1.21
COL4A6-210ENST00000621266 CCKP06307 115 aa7.49□□□□□ -1.21
COL4A6-210ENST00000621266 SPART-AS1P0CW21 52 aa7.49□□□□□ -1.21
COL4A6-210ENST00000621266 TP53TG3Q9ULZ0 132 aa7.49□□□□□ -1.21
COL4A6-210ENST00000621266 E7EUB6 86 aa7.49□□□□□ -1.21
COL4A6-210ENST00000621266 IGLV2-8P01709 118 aa7.49□□□□□ -1.21
COL4A6-210ENST00000621266 CCL18P55774 89 aa7.49□□□□□ -1.21
COL4A6-210ENST00000621266 SERP1Q9Y6X1 66 aa7.49□□□□□ -1.21
COL4A6-210ENST00000621266 TECTAO75443 2155 aa7.49□□□□□ -1.21
COL4A6-210ENST00000621266 WISP2O76076 250 aa7.48□□□□□ -1.21
COL4A6-210ENST00000621266 LY6G6DO95868 133 aa7.48□□□□□ -1.21
COL4A6-210ENST00000621266 TRBV6-1A0A0K0K1D8 114 aa7.48□□□□□ -1.21
COL4A6-210ENST00000621266 LYRM9A8MSI8 78 aa7.48□□□□□ -1.21
COL4A6-210ENST00000621266 KRTAP27-1Q3LI81 207 aa7.48□□□□□ -1.21
COL4A6-210ENST00000621266 Q8NA96 180 aa7.48□□□□□ -1.21
COL4A6-210ENST00000621266 IGKV2-24A0A0C4DH68 120 aa7.48□□□□□ -1.21
COL4A6-210ENST00000621266 C2orf91Q6ZV80 131 aa7.48□□□□□ -1.21
COL4A6-210ENST00000621266 DENND4CQ5VZ89 1909 aa7.48□□□□□ -1.21
COL4A6-210ENST00000621266 CDKN2A-AS1Q9UH64 79 aa7.48□□□□□ -1.21
COL4A6-210ENST00000621266 LOC107984640A0A0U1RRK4 108 aa7.47□□□□□ -1.21
COL4A6-210ENST00000621266 MIFP14174 115 aa7.47□□□□□ -1.21
COL4A6-210ENST00000621266 ZFAND2AQ8N6M9 145 aa7.47□□□□□ -1.21
COL4A6-210ENST00000621266 LINC00467Q9BRT7 94 aa7.47□□□□□ -1.21
COL4A6-210ENST00000621266 ZNF22P17026 224 aaPredicted RBP7.47□□□□□ -1.21
COL4A6-210ENST00000621266 PSPHP1O15172 72 aa7.47□□□□□ -1.21
COL4A6-210ENST00000621266 IGLV2-14P01704 120 aa7.47□□□□□ -1.21
COL4A6-210ENST00000621266 Q6ZSR3 168 aa7.47□□□□□ -1.21
COL4A6-210ENST00000621266 LINC00269Q8N2A0 174 aa7.46□□□□□ -1.21
COL4A6-210ENST00000621266 CSDC2Q9Y534 153 aaKnown RBP7.46□□□□□ -1.21
COL4A6-210ENST00000621266 ACACBO00763 2458 aa7.46□□□□□ -1.21
COL4A6-210ENST00000621266 A8MZ25 164 aa7.46□□□□□ -1.21
COL4A6-210ENST00000621266 EBI3Q14213 229 aa7.46□□□□□ -1.21
COL4A6-210ENST00000621266 DNAJC9-AS1A6NH13 148 aa7.46□□□□□ -1.22
COL4A6-210ENST00000621266 FAM19A1Q7Z5A9 133 aa7.46□□□□□ -1.22
COL4A6-210ENST00000621266 Q8N9W7 124 aa7.46□□□□□ -1.22
COL4A6-210ENST00000621266 PTPRQQ9UMZ3 2332 aa7.46□□□□□ -1.22
COL4A6-210ENST00000621266 H7C423 109 aa7.46□□□□□ -1.22
COL4A6-210ENST00000621266 Q8N9L7 120 aa7.46□□□□□ -1.22
COL4A6-210ENST00000621266 KLK5Q9Y337 293 aaPredicted RBP7.46□□□□□ -1.22
COL4A6-210ENST00000621266 NCKAP5O14513 1909 aa7.45□□□□□ -1.22
COL4A6-210ENST00000621266 UFSP1Q6NVU6 142 aa7.45□□□□□ -1.22
COL4A6-210ENST00000621266 IGKV1D-37A0A075B6S9 117 aa7.45□□□□□ -1.22
COL4A6-210ENST00000621266 C6orf99Q4VX62 202 aa7.45□□□□□ -1.22
COL4A6-210ENST00000621266 CELA1Q9UNI1 258 aa7.45□□□□□ -1.22
COL4A6-210ENST00000621266 OBSL1O75147 1896 aa7.45□□□□□ -1.22
COL4A6-210ENST00000621266 DAZAP2Q15038 168 aaPredicted RBP7.45□□□□□ -1.22
COL4A6-210ENST00000621266 IGLV4-3A0A075B6K6 122 aa7.44□□□□□ -1.22
COL4A6-210ENST00000621266 C9orf85Q96MD7 179 aa7.44□□□□□ -1.22
COL4A6-210ENST00000621266 C11orf1Q9H5F2 150 aa7.44□□□□□ -1.22
COL4A6-210ENST00000621266 MRPS36P82909 103 aaKnown RBP7.44□□□□□ -1.22
COL4A6-210ENST00000621266 Q8N976 141 aa7.44□□□□□ -1.22
COL4A6-210ENST00000621266 ZNF106Q9H2Y7 1883 aaKnown RBP7.43□□□□□ -1.22
COL4A6-210ENST00000621266 SHANK1Q9Y566 2161 aa7.43□□□□□ -1.22
COL4A6-210ENST00000621266 TRBV6-5A0A0K0K1A5 114 aa7.43□□□□□ -1.22
COL4A6-210ENST00000621266 LST1O00453 97 aa7.43□□□□□ -1.22
COL4A6-210ENST00000621266 WFDC10AQ9H1F0 79 aa7.43□□□□□ -1.22
COL4A6-210ENST00000621266 A0A087WVE0 104 aa7.43□□□□□ -1.22
COL4A6-210ENST00000621266 DEFB135Q30KP9 77 aa7.43□□□□□ -1.22
COL4A6-210ENST00000621266 YPEL4Q96NS1 127 aa7.43□□□□□ -1.22
COL4A6-210ENST00000621266 UNQ9165/PRO28630Q6UXU0 137 aa7.43□□□□□ -1.22
COL4A6-210ENST00000621266 REG3AQ06141 175 aa7.42□□□□□ -1.22
COL4A6-210ENST00000621266 C5orf56Q8N8D9 126 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms