RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 ZNF580Q9UK33 172 aa9.48□□□□□ -0.89
SYNRG-229ENST00000621136 INSP01308 110 aa9.47□□□□□ -0.89
SYNRG-229ENST00000621136 ENHOQ6UWT2 76 aa9.47□□□□□ -0.89
SYNRG-229ENST00000621136 SPANXDQ9BXN6 97 aa9.47□□□□□ -0.89
SYNRG-229ENST00000621136 NCR3O14931 201 aa9.47□□□□□ -0.89
SYNRG-229ENST00000621136 P0DMU3 169 aa9.47□□□□□ -0.89
SYNRG-229ENST00000621136 FAM231AP0DMU4 169 aa9.47□□□□□ -0.89
SYNRG-229ENST00000621136 FAM231CP0DMU5 169 aa9.47□□□□□ -0.89
SYNRG-229ENST00000621136 ABCA2Q9BZC7 2435 aa9.47□□□□□ -0.89
SYNRG-229ENST00000621136 TRAV25A0A0B4J276 109 aa9.47□□□□□ -0.89
SYNRG-229ENST00000621136 C1orf195Q5TG92 126 aa9.47□□□□□ -0.89
SYNRG-229ENST00000621136 MDFICQ9P1T7 246 aa9.47□□□□□ -0.89
SYNRG-229ENST00000621136 C11orf21Q9P2W6 132 aa9.47□□□□□ -0.89
SYNRG-229ENST00000621136 TSPEAR-AS2P59090 65 aa9.46□□□□□ -0.89
SYNRG-229ENST00000621136 C11orf44Q8N8P7 122 aa9.46□□□□□ -0.89
SYNRG-229ENST00000621136 ODF3Q96PU9 254 aa9.46□□□□□ -0.89
SYNRG-229ENST00000621136 NHLRC4P0CG21 123 aaPredicted RBP9.46□□□□□ -0.9
SYNRG-229ENST00000621136 MBD3L2Q8NHZ7 208 aaPredicted RBP9.46□□□□□ -0.9
SYNRG-229ENST00000621136 BUB3O43684 328 aa9.46□□□□□ -0.9
SYNRG-229ENST00000621136 Q6Q795 121 aa9.46□□□□□ -0.9
SYNRG-229ENST00000621136 SCXQ7RTU7 201 aa9.45□□□□□ -0.9
SYNRG-229ENST00000621136 SND1-IT1Q9HBX3 110 aa9.45□□□□□ -0.9
SYNRG-229ENST00000621136 NRACQ8N912 160 aa9.45□□□□□ -0.9
SYNRG-229ENST00000621136 CD59P13987 128 aa9.45□□□□□ -0.9
SYNRG-229ENST00000621136 TIRAPP58753 221 aa9.45□□□□□ -0.9
SYNRG-229ENST00000621136 PIK3CD-AS1Q5SR53 167 aa9.45□□□□□ -0.9
SYNRG-229ENST00000621136 SOSTDC1Q6X4U4 206 aa9.45□□□□□ -0.9
SYNRG-229ENST00000621136 SERP2Q8N6R1 65 aa9.45□□□□□ -0.9
SYNRG-229ENST00000621136 SPANXCQ9NY87 97 aa9.45□□□□□ -0.9
SYNRG-229ENST00000621136 HOXB4P17483 251 aaPredicted RBP9.44□□□□□ -0.9
SYNRG-229ENST00000621136 CLPSL2Q6UWE3 100 aa9.44□□□□□ -0.9
SYNRG-229ENST00000621136 LINC00526Q96FQ7 95 aa9.44□□□□□ -0.9
SYNRG-229ENST00000621136 OVOL2Q9BRP0 275 aa9.44□□□□□ -0.9
SYNRG-229ENST00000621136 IGHV4-4A0A075B6R2 117 aa9.44□□□□□ -0.9
SYNRG-229ENST00000621136 TRAV13-2A0A0B4J235 113 aa9.44□□□□□ -0.9
SYNRG-229ENST00000621136 RPL18AQ02543 176 aaKnown RBP9.44□□□□□ -0.9
SYNRG-229ENST00000621136 PRRC2AP48634 2157 aaKnown RBP9.44□□□□□ -0.9
SYNRG-229ENST00000621136 DOPEY1Q5JWR5 2465 aa9.44□□□□□ -0.9
SYNRG-229ENST00000621136 TRBV30A0A0K0K1B3 111 aa9.44□□□□□ -0.9
SYNRG-229ENST00000621136 TMEM263Q8WUH6 116 aaKnown RBP9.44□□□□□ -0.9
SYNRG-229ENST00000621136 CCDC168Q8NDH2 2452 aa9.44□□□□□ -0.9
SYNRG-229ENST00000621136 RNF5Q99942 180 aa9.44□□□□□ -0.9
SYNRG-229ENST00000621136 ORMDL1Q9P0S3 153 aa9.44□□□□□ -0.9
SYNRG-229ENST00000621136 LRCOL1A6NCL2 159 aa9.43□□□□□ -0.9
SYNRG-229ENST00000621136 ELANEP08246 267 aa9.43□□□□□ -0.9
SYNRG-229ENST00000621136 NBL1P41271 181 aa9.43□□□□□ -0.9
SYNRG-229ENST00000621136 Q6ZS92 163 aa9.43□□□□□ -0.9
SYNRG-229ENST00000621136 TIMM17AQ99595 171 aa9.43□□□□□ -0.9
SYNRG-229ENST00000621136 TRGV4A0A0C4DH28 118 aa9.43□□□□□ -0.9
SYNRG-229ENST00000621136 MIAQ16674 131 aa9.43□□□□□ -0.9
SYNRG-229ENST00000621136 C5orf38Q86SI9 138 aa9.43□□□□□ -0.9
SYNRG-229ENST00000621136 SPTSSBQ8NFR3 76 aa9.42□□□□□ -0.9
SYNRG-229ENST00000621136 ZMAT4Q9H898 229 aa9.42□□□□□ -0.9
SYNRG-229ENST00000621136 TRBV7-1A0A0A6YYK4 115 aa9.42□□□□□ -0.9
SYNRG-229ENST00000621136 LINC00311Q8N616 119 aa9.42□□□□□ -0.9
SYNRG-229ENST00000621136 TMEM190Q8WZ59 177 aa9.42□□□□□ -0.9
SYNRG-229ENST00000621136 IGHV1-58A0A0C4DH39 117 aa9.42□□□□□ -0.9
SYNRG-229ENST00000621136 COX7A2LO14548 114 aa9.42□□□□□ -0.9
SYNRG-229ENST00000621136 CUL9Q8IWT3 2517 aa9.41□□□□□ -0.9
SYNRG-229ENST00000621136 DEFB131AP59861 70 aa9.41□□□□□ -0.9
SYNRG-229ENST00000621136 XCL2Q9UBD3 114 aa9.41□□□□□ -0.9
SYNRG-229ENST00000621136 LST1O00453 97 aa9.41□□□□□ -0.9
SYNRG-229ENST00000621136 SAA4P35542 130 aa9.41□□□□□ -0.9
SYNRG-229ENST00000621136 UPK3BQ9BT76 320 aa9.41□□□□□ -0.9
SYNRG-229ENST00000621136 TIMM17BO60830 172 aa9.41□□□□□ -0.9
SYNRG-229ENST00000621136 ANKRD11Q6UB99 2663 aaPredicted RBP9.41□□□□□ -0.9
SYNRG-229ENST00000621136 CDKN2A-AS1Q9UH64 79 aa9.4□□□□□ -0.9
SYNRG-229ENST00000621136 IGHV4-28A0A0C4DH34 117 aa9.4□□□□□ -0.9
SYNRG-229ENST00000621136 TLN1Q9Y490 2541 aaKnown RBP9.4□□□□□ -0.9
SYNRG-229ENST00000621136 IGLV11-55A0A075B6I3 123 aa9.4□□□□□ -0.9
SYNRG-229ENST00000621136 A0A1W2PRX2 142 aa9.4□□□□□ -0.9
SYNRG-229ENST00000621136 THBDP07204 575 aa9.4□□□□□ -0.9
SYNRG-229ENST00000621136 MIR7-3HGQ8N6C7 128 aa9.4□□□□□ -0.9
SYNRG-229ENST00000621136 C20orf203Q8NBC4 194 aa9.4□□□□□ -0.9
SYNRG-229ENST00000621136 E7EQL1 145 aa9.4□□□□□ -0.91
SYNRG-229ENST00000621136 HTN3P15516 51 aa9.4□□□□□ -0.91
SYNRG-229ENST00000621136 COX7B2Q8TF08 81 aa9.4□□□□□ -0.91
SYNRG-229ENST00000621136 FANCD2OSQ96PS1 177 aa9.4□□□□□ -0.91
SYNRG-229ENST00000621136 FAM215AQ9Y5M1 114 aa9.4□□□□□ -0.91
SYNRG-229ENST00000621136 TRBV6-1A0A0K0K1D8 114 aa9.39□□□□□ -0.91
SYNRG-229ENST00000621136 FAM223AQ8IWN6 122 aa9.39□□□□□ -0.91
SYNRG-229ENST00000621136 PKD1L2Q7Z442 2459 aa9.39□□□□□ -0.91
SYNRG-229ENST00000621136 TMEM223A0PJW6 202 aa9.39□□□□□ -0.91
SYNRG-229ENST00000621136 LRBAP50851 2863 aa9.39□□□□□ -0.91
SYNRG-229ENST00000621136 MBD3L4A6NDZ8 208 aaPredicted RBP9.39□□□□□ -0.91
SYNRG-229ENST00000621136 MBD3L3A6NE82 208 aaPredicted RBP9.39□□□□□ -0.91
SYNRG-229ENST00000621136 MBD3L5A6NJ08 208 aaPredicted RBP9.39□□□□□ -0.91
SYNRG-229ENST00000621136 TRBV12-3P01733 135 aa9.39□□□□□ -0.91
SYNRG-229ENST00000621136 IMUPQ9GZP8 106 aa9.39□□□□□ -0.91
SYNRG-229ENST00000621136 FAM110DQ8TAY7 271 aaPredicted RBP9.38□□□□□ -0.91
SYNRG-229ENST00000621136 H3BUX3 64 aa9.38□□□□□ -0.91
SYNRG-229ENST00000621136 RETNQ9HD89 108 aa9.37□□□□□ -0.91
SYNRG-229ENST00000621136 J3QLI3 93 aa9.37□□□□□ -0.91
SYNRG-229ENST00000621136 PRR4Q16378 134 aa9.37□□□□□ -0.91
SYNRG-229ENST00000621136 SMAD5-AS1Q9Y6J3 95 aa9.37□□□□□ -0.91
SYNRG-229ENST00000621136 A0A096LPF7 62 aa9.36□□□□□ -0.91
SYNRG-229ENST00000621136 POM121L12Q8N7R1 296 aa9.36□□□□□ -0.91
SYNRG-229ENST00000621136 ASH1LQ9NR48 2969 aaKnown RBP9.36□□□□□ -0.91
SYNRG-229ENST00000621136 COL27A1Q8IZC6 1860 aaPredicted RBP9.36□□□□□ -0.91
SYNRG-229ENST00000621136 PRR9Q5T870 116 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms