RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 SMIM2Q9BVW6 85 aa6.29□□□□□ -1.4
PTPDC1-204ENST00000620992 C2orf91Q6ZV80 131 aa6.28□□□□□ -1.4
PTPDC1-204ENST00000620992 PCP2Q8IVA1 136 aa6.28□□□□□ -1.4
PTPDC1-204ENST00000620992 TTTY13Q9BZ97 58 aa6.28□□□□□ -1.4
PTPDC1-204ENST00000620992 ODF3BA8MYP8 253 aa6.28□□□□□ -1.4
PTPDC1-204ENST00000620992 LEPROTO15243 131 aa6.28□□□□□ -1.4
PTPDC1-204ENST00000620992 IGHG2P01859 326 aa6.28□□□□□ -1.4
PTPDC1-204ENST00000620992 ATP5G1P05496 136 aa6.28□□□□□ -1.4
PTPDC1-204ENST00000620992 CCL18P55774 89 aa6.28□□□□□ -1.4
PTPDC1-204ENST00000620992 OXLD1Q5BKU9 147 aa6.28□□□□□ -1.4
PTPDC1-204ENST00000620992 RBX1P62877 108 aa6.28□□□□□ -1.4
PTPDC1-204ENST00000620992 RPL39P62891 51 aaKnown RBP6.28□□□□□ -1.4
PTPDC1-204ENST00000620992 LGALS9BQ3B8N2 356 aa6.28□□□□□ -1.4
PTPDC1-204ENST00000620992 LGALS9CQ6DKI2 356 aa6.28□□□□□ -1.4
PTPDC1-204ENST00000620992 BOD1L2Q8IYS8 172 aa6.28□□□□□ -1.4
PTPDC1-204ENST00000620992 DAND5Q8N907 189 aa6.28□□□□□ -1.4
PTPDC1-204ENST00000620992 BBC3Q96PG8 261 aaPredicted RBP6.28□□□□□ -1.4
PTPDC1-204ENST00000620992 TIMM17AQ99595 171 aa6.28□□□□□ -1.4
PTPDC1-204ENST00000620992 TRAV12-1A0A0B4J245 112 aa6.27□□□□□ -1.41
PTPDC1-204ENST00000620992 C9JAW5 83 aa6.27□□□□□ -1.41
PTPDC1-204ENST00000620992 IGF1P05019 195 aa6.27□□□□□ -1.41
PTPDC1-204ENST00000620992 KIR3DS1Q14943 382 aa6.27□□□□□ -1.41
PTPDC1-204ENST00000620992 F8WEM9 126 aa6.27□□□□□ -1.41
PTPDC1-204ENST00000620992 RHOHQ15669 191 aa6.27□□□□□ -1.41
PTPDC1-204ENST00000620992 IGKV2-24A0A0C4DH68 120 aa6.27□□□□□ -1.41
PTPDC1-204ENST00000620992 A0A0J9YXV3 536 aa6.27□□□□□ -1.41
PTPDC1-204ENST00000620992 P0DMU3 169 aa6.27□□□□□ -1.41
PTPDC1-204ENST00000620992 FAM231AP0DMU4 169 aa6.27□□□□□ -1.41
PTPDC1-204ENST00000620992 FAM231CP0DMU5 169 aa6.27□□□□□ -1.41
PTPDC1-204ENST00000620992 CEMP1Q6PRD7 247 aaPredicted RBP6.27□□□□□ -1.41
PTPDC1-204ENST00000620992 ATP6V0E2Q8NHE4 81 aa6.27□□□□□ -1.41
PTPDC1-204ENST00000620992 RPL18AQ02543 176 aaKnown RBP6.26□□□□□ -1.41
PTPDC1-204ENST00000620992 SUMO4Q6EEV6 95 aa6.26□□□□□ -1.41
PTPDC1-204ENST00000620992 C18orf65Q6ZTR6 163 aa6.26□□□□□ -1.41
PTPDC1-204ENST00000620992 IGLV2-18A0A075B6J9 118 aa6.26□□□□□ -1.41
PTPDC1-204ENST00000620992 K7EP13 123 aa6.26□□□□□ -1.41
PTPDC1-204ENST00000620992 C2orf82Q6UX34 121 aa6.26□□□□□ -1.41
PTPDC1-204ENST00000620992 AVPP01185 164 aa6.26□□□□□ -1.41
PTPDC1-204ENST00000620992 HSD52Q0P140 79 aa6.26□□□□□ -1.41
PTPDC1-204ENST00000620992 Q6ZSV7 163 aa6.26□□□□□ -1.41
PTPDC1-204ENST00000620992 U3KQK5 164 aa6.26□□□□□ -1.41
PTPDC1-204ENST00000620992 LRCOL1A6NCL2 159 aa6.26□□□□□ -1.41
PTPDC1-204ENST00000620992 IGLC6P0CF74 106 aa6.26□□□□□ -1.41
PTPDC1-204ENST00000620992 GAGE2BQ13066 116 aa6.26□□□□□ -1.41
PTPDC1-204ENST00000620992 ATXN8Q156A1 80 aa6.26□□□□□ -1.41
PTPDC1-204ENST00000620992 OPRPNQ99935 248 aaPredicted RBP6.26□□□□□ -1.41
PTPDC1-204ENST00000620992 A0A1W2PPR1 153 aa6.25□□□□□ -1.41
PTPDC1-204ENST00000620992 CDK2AP2O75956 126 aa6.25□□□□□ -1.41
PTPDC1-204ENST00000620992 IGHG4P01861 327 aa6.25□□□□□ -1.41
PTPDC1-204ENST00000620992 TAL2Q16559 108 aa6.25□□□□□ -1.41
PTPDC1-204ENST00000620992 A0A096LNI7 61 aa6.25□□□□□ -1.41
PTPDC1-204ENST00000620992 LINC01549A6NIU2 74 aa6.25□□□□□ -1.41
PTPDC1-204ENST00000620992 VSIG2Q96IQ7 327 aa6.25□□□□□ -1.41
PTPDC1-204ENST00000620992 HHLA3Q9XRX5 114 aa6.25□□□□□ -1.41
PTPDC1-204ENST00000620992 TINCRA0A1B0GVN0 87 aa6.25□□□□□ -1.41
PTPDC1-204ENST00000620992 M0R2N4 97 aa6.25□□□□□ -1.41
PTPDC1-204ENST00000620992 FGF6P10767 208 aa6.25□□□□□ -1.41
PTPDC1-204ENST00000620992 Q8N8P6 123 aa6.25□□□□□ -1.41
PTPDC1-204ENST00000620992 RNF185Q96GF1 192 aa6.25□□□□□ -1.41
PTPDC1-204ENST00000620992 UBR5O95071 2799 aaPredicted RBP6.25□□□□□ -1.41
PTPDC1-204ENST00000620992 LECT2O14960 151 aa6.24□□□□□ -1.41
PTPDC1-204ENST00000620992 GAGE2AQ6NT46 116 aa6.24□□□□□ -1.41
PTPDC1-204ENST00000620992 Q6ZTI0 123 aa6.24□□□□□ -1.41
PTPDC1-204ENST00000620992 Q9H8V8 135 aa6.24□□□□□ -1.41
PTPDC1-204ENST00000620992 AGRNO00468 2067 aa6.24□□□□□ -1.41
PTPDC1-204ENST00000620992 HRNRQ86YZ3 2850 aaPredicted RBP6.24□□□□□ -1.41
PTPDC1-204ENST00000620992 A6NDX4 124 aa6.24□□□□□ -1.41
PTPDC1-204ENST00000620992 K7ERJ3 54 aa6.24□□□□□ -1.41
PTPDC1-204ENST00000620992 CAMK2N2Q96S95 79 aa6.24□□□□□ -1.41
PTPDC1-204ENST00000620992 MRPL23Q16540 153 aaKnown RBP6.24□□□□□ -1.41
PTPDC1-204ENST00000620992 Q8N6K4 173 aa6.24□□□□□ -1.41
PTPDC1-204ENST00000620992 CCDC140Q96MF4 163 aa6.24□□□□□ -1.41
PTPDC1-204ENST00000620992 GCN1Q92616 2671 aaKnown RBP6.24□□□□□ -1.41
PTPDC1-204ENST00000620992 TRAV26-1A0A087WT03 109 aa6.24□□□□□ -1.41
PTPDC1-204ENST00000620992 ZFAND6Q6FIF0 208 aa6.24□□□□□ -1.41
PTPDC1-204ENST00000620992 C9orf118A6NHY6 69 aa6.23□□□□□ -1.41
PTPDC1-204ENST00000620992 IGKV2D-26A0A0A0MRZ7 120 aa6.23□□□□□ -1.41
PTPDC1-204ENST00000620992 TRAV4A0A0B4J268 109 aa6.23□□□□□ -1.41
PTPDC1-204ENST00000620992 IGHV4-28A0A0C4DH34 117 aa6.23□□□□□ -1.41
PTPDC1-204ENST00000620992 HAMPP81172 84 aa6.23□□□□□ -1.41
PTPDC1-204ENST00000620992 C11orf71Q6IPW1 123 aa6.23□□□□□ -1.41
PTPDC1-204ENST00000620992 TMEM141Q96I45 108 aa6.23□□□□□ -1.41
PTPDC1-204ENST00000620992 ZFAND3Q9H8U3 227 aa6.23□□□□□ -1.41
PTPDC1-204ENST00000620992 C11orf21Q9P2W6 132 aa6.23□□□□□ -1.41
PTPDC1-204ENST00000620992 H3BUA1 57 aa6.23□□□□□ -1.41
PTPDC1-204ENST00000620992 PLA2G2AP14555 144 aa6.23□□□□□ -1.41
PTPDC1-204ENST00000620992 UNC79Q9P2D8 2635 aa6.23□□□□□ -1.41
PTPDC1-204ENST00000620992 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.22□□□□□ -1.41
PTPDC1-204ENST00000620992 J3QQQ9 107 aa6.22□□□□□ -1.41
PTPDC1-204ENST00000620992 LINC01559Q495D7 138 aa6.22□□□□□ -1.41
PTPDC1-204ENST00000620992 FAM222AQ5U5X8 452 aa6.22□□□□□ -1.41
PTPDC1-204ENST00000620992 RBAKDNA6NC62 111 aa6.22□□□□□ -1.41
PTPDC1-204ENST00000620992 ODF1Q14990 250 aa6.22□□□□□ -1.41
PTPDC1-204ENST00000620992 HIGD2BQ4VC39 106 aa6.22□□□□□ -1.41
PTPDC1-204ENST00000620992 GTSF1LQ9H1H1 148 aa6.22□□□□□ -1.41
PTPDC1-204ENST00000620992 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.22□□□□□ -1.41
PTPDC1-204ENST00000620992 RPL32P62910 135 aaKnown RBP6.22□□□□□ -1.41
PTPDC1-204ENST00000620992 EBI3Q14213 229 aa6.22□□□□□ -1.41
PTPDC1-204ENST00000620992 LINC01006Q8NI28 216 aa6.22□□□□□ -1.41
PTPDC1-204ENST00000620992 F8VRH5 84 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms