RNA–Protein interactions for RNA: ENST00000620581.4

GRIA3-208, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 2,991 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-208ENST00000620581 COTL1Q14019 142 aa9.27□□□□□ -0.93
GRIA3-208ENST00000620581 RPL39LQ96EH5 51 aaKnown RBP9.27□□□□□ -0.93
GRIA3-208ENST00000620581 URB1-AS1Q96HZ7 61 aa9.27□□□□□ -0.93
GRIA3-208ENST00000620581 DEFB4AO15263 64 aa9.27□□□□□ -0.93
GRIA3-208ENST00000620581 DNAH10OSP0CZ25 163 aa9.27□□□□□ -0.93
GRIA3-208ENST00000620581 P0DMU3 169 aa9.27□□□□□ -0.93
GRIA3-208ENST00000620581 FAM231AP0DMU4 169 aa9.27□□□□□ -0.93
GRIA3-208ENST00000620581 FAM231CP0DMU5 169 aa9.27□□□□□ -0.93
GRIA3-208ENST00000620581 LYPD5Q6UWN5 251 aa9.26□□□□□ -0.93
GRIA3-208ENST00000620581 C20orf203Q8NBC4 194 aa9.26□□□□□ -0.93
GRIA3-208ENST00000620581 MUC21A0A0G2JKD1 596 aa9.26□□□□□ -0.93
GRIA3-208ENST00000620581 MUC21A0A140T8X8 626 aa9.26□□□□□ -0.93
GRIA3-208ENST00000620581 LINC00614P0C842 121 aa9.26□□□□□ -0.93
GRIA3-208ENST00000620581 LGALS9CQ6DKI2 356 aa9.26□□□□□ -0.93
GRIA3-208ENST00000620581 SSTP61278 116 aa9.25□□□□□ -0.93
GRIA3-208ENST00000620581 LINC01556Q5JQF7 62 aa9.25□□□□□ -0.93
GRIA3-208ENST00000620581 LINC01561Q8N1V8 128 aa9.25□□□□□ -0.93
GRIA3-208ENST00000620581 VPS13DQ5THJ4 4388 aa9.25□□□□□ -0.93
GRIA3-208ENST00000620581 TRBV25-1A0A075B6N4 114 aa9.25□□□□□ -0.93
GRIA3-208ENST00000620581 ZNRF2Q8NHG8 242 aa9.25□□□□□ -0.93
GRIA3-208ENST00000620581 TRAV26-2A0A0B4J265 109 aa9.24□□□□□ -0.93
GRIA3-208ENST00000620581 LINC00310P59036 64 aa9.24□□□□□ -0.93
GRIA3-208ENST00000620581 TMEM243Q9BU79 118 aa9.24□□□□□ -0.93
GRIA3-208ENST00000620581 PAPPA-AS1Q5QFB9 102 aa9.24□□□□□ -0.93
GRIA3-208ENST00000620581 AP5S1Q9NUS5 200 aa9.24□□□□□ -0.93
GRIA3-208ENST00000620581 NTM-AS1Q6ZSK4 140 aa9.23□□□□□ -0.93
GRIA3-208ENST00000620581 FA2HQ7L5A8 372 aa9.23□□□□□ -0.93
GRIA3-208ENST00000620581 TRAV8-6A0A0B4J262 113 aa9.23□□□□□ -0.93
GRIA3-208ENST00000620581 SPATA12Q7Z6I5 190 aa9.23□□□□□ -0.93
GRIA3-208ENST00000620581 NIT1Q86X76 327 aa9.23□□□□□ -0.93
GRIA3-208ENST00000620581 NOTCH1P46531 2555 aa9.22□□□□□ -0.93
GRIA3-208ENST00000620581 GAS8-AS1O95177 125 aa9.22□□□□□ -0.93
GRIA3-208ENST00000620581 HBDP02042 147 aa9.22□□□□□ -0.93
GRIA3-208ENST00000620581 COL7A1Q02388 2944 aa9.22□□□□□ -0.93
GRIA3-208ENST00000620581 TRAV12-1A0A0B4J245 112 aa9.22□□□□□ -0.93
GRIA3-208ENST00000620581 SMKR1H3BMG3 65 aa9.22□□□□□ -0.93
GRIA3-208ENST00000620581 GAGE12JA6NER3 117 aa9.21□□□□□ -0.93
GRIA3-208ENST00000620581 ATP5LO75964 103 aa9.21□□□□□ -0.93
GRIA3-208ENST00000620581 GAGE1Q13065 139 aa9.21□□□□□ -0.93
GRIA3-208ENST00000620581 GAGE4Q13068 117 aa9.21□□□□□ -0.93
GRIA3-208ENST00000620581 GAGE5Q13069 117 aa9.21□□□□□ -0.93
GRIA3-208ENST00000620581 GAGE13Q4V321 117 aa9.21□□□□□ -0.93
GRIA3-208ENST00000620581 C10orf126Q8N4M7 172 aa9.21□□□□□ -0.94
GRIA3-208ENST00000620581 PRSS3P2Q8NHM4 247 aa9.21□□□□□ -0.94
GRIA3-208ENST00000620581 CYSLTR1Q9Y271 337 aa9.21□□□□□ -0.94
GRIA3-208ENST00000620581 A0A096LNJ9 63 aa9.21□□□□□ -0.94
GRIA3-208ENST00000620581 C5orf52A6NGY3 159 aa9.21□□□□□ -0.94
GRIA3-208ENST00000620581 IGIPA6NJ69 53 aa9.21□□□□□ -0.94
GRIA3-208ENST00000620581 IFI27P40305 119 aaPredicted RBP9.21□□□□□ -0.94
GRIA3-208ENST00000620581 CCL18P55774 89 aa9.21□□□□□ -0.94
GRIA3-208ENST00000620581 PRR34Q9NV39 138 aa9.21□□□□□ -0.94
GRIA3-208ENST00000620581 AMTP48728 403 aa9.2□□□□□ -0.94
GRIA3-208ENST00000620581 AMELXQ99217 191 aa9.2□□□□□ -0.94
GRIA3-208ENST00000620581 UBE2D4Q9Y2X8 147 aa9.2□□□□□ -0.94
GRIA3-208ENST00000620581 TENM3Q9P273 2699 aa9.2□□□□□ -0.94
GRIA3-208ENST00000620581 IGHV3-73A0A0B4J1V6 119 aa9.2□□□□□ -0.94
GRIA3-208ENST00000620581 ERASQ7Z444 233 aa9.2□□□□□ -0.94
GRIA3-208ENST00000620581 TTC32Q5I0X7 151 aa9.19□□□□□ -0.94
GRIA3-208ENST00000620581 LOC100131303A0A0U1RQF7 123 aa9.19□□□□□ -0.94
GRIA3-208ENST00000620581 ESRGQ1W209 222 aa9.18□□□□□ -0.94
GRIA3-208ENST00000620581 KIAA1644Q3SXP7 199 aa9.18□□□□□ -0.94
GRIA3-208ENST00000620581 CASC10Q5T4H9 136 aa9.18□□□□□ -0.94
GRIA3-208ENST00000620581 HSPB8Q9UJY1 196 aa9.18□□□□□ -0.94
GRIA3-208ENST00000620581 BAGE3Q86Y29 109 aa9.17□□□□□ -0.94
GRIA3-208ENST00000620581 LINC00588Q9Y4M8 146 aa9.17□□□□□ -0.94
GRIA3-208ENST00000620581 F8WDY8 70 aa9.17□□□□□ -0.94
GRIA3-208ENST00000620581 SERF1AO75920 110 aa9.17□□□□□ -0.94
GRIA3-208ENST00000620581 HIST3H2BBQ8N257 126 aa9.17□□□□□ -0.94
GRIA3-208ENST00000620581 FAM104AQ969W3 186 aa9.16□□□□□ -0.94
GRIA3-208ENST00000620581 TRAV8-4A0A0B4J246 113 aa9.16□□□□□ -0.94
GRIA3-208ENST00000620581 Q9UF83 564 aa9.16□□□□□ -0.94
GRIA3-208ENST00000620581 C2orf66Q6UXQ4 117 aa9.15□□□□□ -0.94
GRIA3-208ENST00000620581 OR5A1Q8NGJ0 315 aa9.15□□□□□ -0.94
GRIA3-208ENST00000620581 IBA57-AS1B1ANH7 110 aa9.15□□□□□ -0.94
GRIA3-208ENST00000620581 ODF1Q14990 250 aa9.15□□□□□ -0.94
GRIA3-208ENST00000620581 IGLV5-45A0A087WSX0 123 aa9.15□□□□□ -0.95
GRIA3-208ENST00000620581 TRAV9-2A0A087WT02 112 aa9.15□□□□□ -0.95
GRIA3-208ENST00000620581 CDC42SE2Q9NRR3 84 aa9.15□□□□□ -0.95
GRIA3-208ENST00000620581 A0A0J9YY99 117 aa9.14□□□□□ -0.95
GRIA3-208ENST00000620581 NUDT3O95989 172 aa9.14□□□□□ -0.95
GRIA3-208ENST00000620581 SEC11AP67812 179 aa9.14□□□□□ -0.95
GRIA3-208ENST00000620581 TMEM101Q96IK0 257 aa9.14□□□□□ -0.95
GRIA3-208ENST00000620581 COX11Q9Y6N1 276 aa9.14□□□□□ -0.95
GRIA3-208ENST00000620581 IGLL5B9A064 214 aa9.14□□□□□ -0.95
GRIA3-208ENST00000620581 HSBP1O75506 76 aa9.14□□□□□ -0.95
GRIA3-208ENST00000620581 ZNF664Q8N3J9 261 aa9.13□□□□□ -0.95
GRIA3-208ENST00000620581 FGF6P10767 208 aa9.13□□□□□ -0.95
GRIA3-208ENST00000620581 HTN3P15516 51 aa9.13□□□□□ -0.95
GRIA3-208ENST00000620581 PET117Q6UWS5 81 aa9.13□□□□□ -0.95
GRIA3-208ENST00000620581 NFE4Q86UQ8 179 aa9.13□□□□□ -0.95
GRIA3-208ENST00000620581 IGLV4-3A0A075B6K6 122 aa9.12□□□□□ -0.95
GRIA3-208ENST00000620581 UBE2L6O14933 153 aa9.12□□□□□ -0.95
GRIA3-208ENST00000620581 Q6ZR54 194 aa9.12□□□□□ -0.95
GRIA3-208ENST00000620581 SIVA1O15304 175 aa9.12□□□□□ -0.95
GRIA3-208ENST00000620581 IGLC3P0DOY3 106 aa9.12□□□□□ -0.95
GRIA3-208ENST00000620581 RNASEKQ6P5S7 137 aaKnown RBP9.12□□□□□ -0.95
GRIA3-208ENST00000620581 RMI2Q96E14 147 aa9.12□□□□□ -0.95
GRIA3-208ENST00000620581 SNRPEP62304 92 aaKnown RBP9.12□□□□□ -0.95
GRIA3-208ENST00000620581 MIAQ16674 131 aa9.12□□□□□ -0.95
GRIA3-208ENST00000620581 LINC00476Q8WZB0 136 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms