RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 MED13LQ71F56 2210 aa12.4□□□□□ -0.42
CNTNAP3B-214ENST00000618777 LRCOL1A6NCL2 159 aa12.4□□□□□ -0.42
CNTNAP3B-214ENST00000618777 CRYGAP11844 174 aa12.4□□□□□ -0.42
CNTNAP3B-214ENST00000618777 PLXNA4Q9HCM2 1894 aa12.4□□□□□ -0.42
CNTNAP3B-214ENST00000618777 SLURP1P55000 103 aa12.4□□□□□ -0.42
CNTNAP3B-214ENST00000618777 IGHV4-59P01825 116 aa12.39□□□□□ -0.43
CNTNAP3B-214ENST00000618777 GPHB5Q86YW7 130 aa12.39□□□□□ -0.43
CNTNAP3B-214ENST00000618777 ZFAND3Q9H8U3 227 aa12.39□□□□□ -0.43
CNTNAP3B-214ENST00000618777 CRIP2P52943 208 aaPredicted RBP12.39□□□□□ -0.43
CNTNAP3B-214ENST00000618777 WFDC10BQ8IUB3 73 aa12.39□□□□□ -0.43
CNTNAP3B-214ENST00000618777 KLK12Q9UKR0 248 aa12.39□□□□□ -0.43
CNTNAP3B-214ENST00000618777 NBASA2RRP1 2371 aa12.39□□□□□ -0.43
CNTNAP3B-214ENST00000618777 TNCP24821 2201 aa12.39□□□□□ -0.43
CNTNAP3B-214ENST00000618777 DEFB136Q30KP8 78 aa12.39□□□□□ -0.43
CNTNAP3B-214ENST00000618777 THADAQ6YHU6 1953 aa12.38□□□□□ -0.43
CNTNAP3B-214ENST00000618777 TRBV7-6A0A0J9YX20 115 aa12.38□□□□□ -0.43
CNTNAP3B-214ENST00000618777 DEFB1P60022 68 aa12.38□□□□□ -0.43
CNTNAP3B-214ENST00000618777 RNF185Q96GF1 192 aa12.38□□□□□ -0.43
CNTNAP3B-214ENST00000618777 FAM215AQ9Y5M1 114 aa12.38□□□□□ -0.43
CNTNAP3B-214ENST00000618777 EBI3Q14213 229 aa12.38□□□□□ -0.43
CNTNAP3B-214ENST00000618777 Q8N9L7 120 aa12.38□□□□□ -0.43
CNTNAP3B-214ENST00000618777 PSPHP1O15172 72 aa12.38□□□□□ -0.43
CNTNAP3B-214ENST00000618777 C6orf99Q4VX62 202 aa12.38□□□□□ -0.43
CNTNAP3B-214ENST00000618777 IGLV1-47P01700 117 aa12.38□□□□□ -0.43
CNTNAP3B-214ENST00000618777 SPRNQ5BIV9 151 aa12.38□□□□□ -0.43
CNTNAP3B-214ENST00000618777 LINC00467Q9BRT7 94 aa12.37□□□□□ -0.43
CNTNAP3B-214ENST00000618777 PLXNA3P51805 1871 aa12.37□□□□□ -0.43
CNTNAP3B-214ENST00000618777 DEFB112Q30KQ8 113 aa12.37□□□□□ -0.43
CNTNAP3B-214ENST00000618777 SERTAD4-AS1Q5TG53 156 aa12.37□□□□□ -0.43
CNTNAP3B-214ENST00000618777 Q6ZS46 218 aa12.37□□□□□ -0.43
CNTNAP3B-214ENST00000618777 C5orf56Q8N8D9 126 aa12.36□□□□□ -0.43
CNTNAP3B-214ENST00000618777 CCL18P55774 89 aa12.36□□□□□ -0.43
CNTNAP3B-214ENST00000618777 B9D2Q9BPU9 175 aa12.36□□□□□ -0.43
CNTNAP3B-214ENST00000618777 URB1-AS1Q96HZ7 61 aa12.36□□□□□ -0.43
CNTNAP3B-214ENST00000618777 ODF3Q96PU9 254 aa12.36□□□□□ -0.43
CNTNAP3B-214ENST00000618777 TCF20Q9UGU0 1960 aaKnown RBP12.36□□□□□ -0.43
CNTNAP3B-214ENST00000618777 SIP14410 1827 aa12.36□□□□□ -0.43
CNTNAP3B-214ENST00000618777 MAPK1IP1LQ8NDC0 245 aa12.36□□□□□ -0.43
CNTNAP3B-214ENST00000618777 A8MZ25 164 aa12.35□□□□□ -0.43
CNTNAP3B-214ENST00000618777 MYCNOSP40205 109 aa12.35□□□□□ -0.43
CNTNAP3B-214ENST00000618777 PRO0255Q9UI72 69 aa12.35□□□□□ -0.43
CNTNAP3B-214ENST00000618777 F8WDY8 70 aa12.34□□□□□ -0.43
CNTNAP3B-214ENST00000618777 C4orf48Q5BLP8 95 aa12.34□□□□□ -0.43
CNTNAP3B-214ENST00000618777 C1orf158Q8N1D5 194 aa12.33□□□□□ -0.43
CNTNAP3B-214ENST00000618777 ESM1Q9NQ30 184 aa12.33□□□□□ -0.44
CNTNAP3B-214ENST00000618777 XIRP1Q702N8 1843 aaKnown RBP12.33□□□□□ -0.44
CNTNAP3B-214ENST00000618777 C3orf84H3BNL1 204 aa12.32□□□□□ -0.44
CNTNAP3B-214ENST00000618777 PRYO14603 147 aa12.32□□□□□ -0.44
CNTNAP3B-214ENST00000618777 CRIP1P50238 77 aa12.32□□□□□ -0.44
CNTNAP3B-214ENST00000618777 TRBV6-5A0A0K0K1A5 114 aa12.32□□□□□ -0.44
CNTNAP3B-214ENST00000618777 NLRC5Q86WI3 1866 aa12.32□□□□□ -0.44
CNTNAP3B-214ENST00000618777 IGHV4-30-2A0A087WSY4 118 aa12.32□□□□□ -0.44
CNTNAP3B-214ENST00000618777 HIGD2AQ9BW72 106 aa12.32□□□□□ -0.44
CNTNAP3B-214ENST00000618777 TMEM89A2RUT3 159 aa12.31□□□□□ -0.44
CNTNAP3B-214ENST00000618777 Q6ZQY7 126 aa12.31□□□□□ -0.44
CNTNAP3B-214ENST00000618777 C9orf85Q96MD7 179 aa12.31□□□□□ -0.44
CNTNAP3B-214ENST00000618777 ESRGQ1W209 222 aa12.31□□□□□ -0.44
CNTNAP3B-214ENST00000618777 KIR2DL5BQ8NHK3 375 aa12.31□□□□□ -0.44
CNTNAP3B-214ENST00000618777 RLFQ13129 1914 aa12.31□□□□□ -0.44
CNTNAP3B-214ENST00000618777 PCNX1Q96RV3 2341 aa12.31□□□□□ -0.44
CNTNAP3B-214ENST00000618777 M0QY20 66 aa12.31□□□□□ -0.44
CNTNAP3B-214ENST00000618777 BRWD1-AS2P59051 145 aa12.31□□□□□ -0.44
CNTNAP3B-214ENST00000618777 KIAA1549Q9HCM3 1950 aa12.31□□□□□ -0.44
CNTNAP3B-214ENST00000618777 PLXND1Q9Y4D7 1925 aa12.3□□□□□ -0.44
CNTNAP3B-214ENST00000618777 UNQ9165/PRO28630Q6UXU0 137 aa12.3□□□□□ -0.44
CNTNAP3B-214ENST00000618777 HELZP42694 1942 aaKnown RBP12.3□□□□□ -0.44
CNTNAP3B-214ENST00000618777 ZMAT4Q9H898 229 aa12.3□□□□□ -0.44
CNTNAP3B-214ENST00000618777 OBSL1O75147 1896 aa12.29□□□□□ -0.44
CNTNAP3B-214ENST00000618777 WNK1Q9H4A3 2382 aa12.29□□□□□ -0.44
CNTNAP3B-214ENST00000618777 WFDC13Q8IUB5 93 aa12.29□□□□□ -0.44
CNTNAP3B-214ENST00000618777 REG3AQ06141 175 aa12.29□□□□□ -0.44
CNTNAP3B-214ENST00000618777 NRACQ8N912 160 aa12.29□□□□□ -0.44
CNTNAP3B-214ENST00000618777 Q96MF0 132 aa12.29□□□□□ -0.44
CNTNAP3B-214ENST00000618777 SMIM11BQ8TCY0 68 aa12.29□□□□□ -0.44
CNTNAP3B-214ENST00000618777 TSC2P49815 1807 aa12.28□□□□□ -0.44
CNTNAP3B-214ENST00000618777 PLXNB1O43157 2135 aa12.28□□□□□ -0.44
CNTNAP3B-214ENST00000618777 LY6G6EA0A0G2JKS1 128 aa12.28□□□□□ -0.44
CNTNAP3B-214ENST00000618777 C9orf66Q5T8R8 295 aa12.28□□□□□ -0.44
CNTNAP3B-214ENST00000618777 LINC00269Q8N2A0 174 aa12.28□□□□□ -0.44
CNTNAP3B-214ENST00000618777 CHCHD10Q8WYQ3 142 aaPredicted RBP12.28□□□□□ -0.44
CNTNAP3B-214ENST00000618777 U3KQA8 63 aa12.28□□□□□ -0.44
CNTNAP3B-214ENST00000618777 SP5Q6BEB4 398 aaPredicted RBP12.27□□□□□ -0.45
CNTNAP3B-214ENST00000618777 A0A0J9YWU9 116 aa12.27□□□□□ -0.45
CNTNAP3B-214ENST00000618777 WFDC10AQ9H1F0 79 aa12.26□□□□□ -0.45
CNTNAP3B-214ENST00000618777 NCKAP5O14513 1909 aa12.26□□□□□ -0.45
CNTNAP3B-214ENST00000618777 FAM30AQ9NZY2 134 aa12.26□□□□□ -0.45
CNTNAP3B-214ENST00000618777 WDR90Q96KV7 1748 aa12.25□□□□□ -0.45
CNTNAP3B-214ENST00000618777 Q6ZPA2 131 aa12.25□□□□□ -0.45
CNTNAP3B-214ENST00000618777 IGHV4-38-2P0DP08 117 aa12.24□□□□□ -0.45
CNTNAP3B-214ENST00000618777 FREM1Q5H8C1 2179 aa12.24□□□□□ -0.45
CNTNAP3B-214ENST00000618777 IGLV2-11P01706 119 aa12.24□□□□□ -0.45
CNTNAP3B-214ENST00000618777 NTM-AS1Q6ZSK4 140 aa12.24□□□□□ -0.45
CNTNAP3B-214ENST00000618777 CCDC140Q96MF4 163 aa12.24□□□□□ -0.45
CNTNAP3B-214ENST00000618777 PLXNA2O75051 1894 aa12.24□□□□□ -0.45
CNTNAP3B-214ENST00000618777 C22orf34Q6ZV56 151 aa12.24□□□□□ -0.45
CNTNAP3B-214ENST00000618777 Q8N7P7 452 aa12.24□□□□□ -0.45
CNTNAP3B-214ENST00000618777 LINC00574Q9H8X3 128 aa12.24□□□□□ -0.45
CNTNAP3B-214ENST00000618777 K7ENP7 123 aa12.23□□□□□ -0.45
CNTNAP3B-214ENST00000618777 Q6ZTI0 123 aa12.23□□□□□ -0.45
CNTNAP3B-214ENST00000618777 VWA8A3KMH1 1905 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms