RNA–Protein interactions for RNA: ENST00000618229.4

SURF4-209, Transcript of surfeit 4, humanhuman

TSL 2 BASIC

Gene SURF4, Length 3,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4-209ENST00000618229 ODF3Q96PU9 254 aa12.15□□□□□ -0.46
SURF4-209ENST00000618229 IGHV4OR15-8A0A075B7B6 117 aa12.15□□□□□ -0.46
SURF4-209ENST00000618229 A0A087WW49 117 aa12.15□□□□□ -0.46
SURF4-209ENST00000618229 TRBV27A0A0K0K1C4 114 aa12.15□□□□□ -0.46
SURF4-209ENST00000618229 RPL13AP40429 203 aaKnown RBP12.15□□□□□ -0.46
SURF4-209ENST00000618229 H7C423 109 aa12.14□□□□□ -0.47
SURF4-209ENST00000618229 I3L3M4 83 aa12.14□□□□□ -0.47
SURF4-209ENST00000618229 SYNJ2BPP57105 145 aa12.14□□□□□ -0.47
SURF4-209ENST00000618229 LMO4P61968 165 aa12.14□□□□□ -0.47
SURF4-209ENST00000618229 SBSPONQ8IVN8 264 aa12.14□□□□□ -0.47
SURF4-209ENST00000618229 SHISA2Q6UWI4 295 aa12.14□□□□□ -0.47
SURF4-209ENST00000618229 MYO18BQ8IUG5 2567 aa12.14□□□□□ -0.47
SURF4-209ENST00000618229 TNFRSF18Q9Y5U5 241 aa12.13□□□□□ -0.47
SURF4-209ENST00000618229 TRBV10-2A0A0K0K1G8 114 aa12.13□□□□□ -0.47
SURF4-209ENST00000618229 IGHV3OR16-12A0A075B7B8 117 aa12.13□□□□□ -0.47
SURF4-209ENST00000618229 DGAT2L7PQ6IED9 249 aa12.12□□□□□ -0.47
SURF4-209ENST00000618229 FN1P02751 2386 aaKnown RBP12.12□□□□□ -0.47
SURF4-209ENST00000618229 IGHV1OR15-1A0A075B7D0 117 aa12.11□□□□□ -0.47
SURF4-209ENST00000618229 A0A0B4J2C4 111 aa12.11□□□□□ -0.47
SURF4-209ENST00000618229 KLLNB2CW77 178 aa12.11□□□□□ -0.47
SURF4-209ENST00000618229 CCDC168Q8NDH2 2452 aa12.11□□□□□ -0.47
SURF4-209ENST00000618229 TRBV7-9A0A0J9YWB2 115 aa12.1□□□□□ -0.47
SURF4-209ENST00000618229 SNRPD3P62318 126 aaKnown RBP12.1□□□□□ -0.47
SURF4-209ENST00000618229 NAV2Q8IVL1 2488 aa12.1□□□□□ -0.47
SURF4-209ENST00000618229 TRGV11A0A075B6L2 103 aa12.09□□□□□ -0.47
SURF4-209ENST00000618229 LGALS9O00182 355 aa12.09□□□□□ -0.47
SURF4-209ENST00000618229 IGHV1-69P01742 117 aa12.09□□□□□ -0.47
SURF4-209ENST00000618229 LY6DQ14210 128 aa12.09□□□□□ -0.47
SURF4-209ENST00000618229 POM121L12Q8N7R1 296 aa12.09□□□□□ -0.47
SURF4-209ENST00000618229 EPG5Q9HCE0 2579 aa12.09□□□□□ -0.47
SURF4-209ENST00000618229 IGKV3OR2-268A0A0C4DH90 116 aa12.09□□□□□ -0.47
SURF4-209ENST00000618229 FLNCQ14315 2725 aa12.08□□□□□ -0.48
SURF4-209ENST00000618229 K7ENP7 123 aa12.08□□□□□ -0.48
SURF4-209ENST00000618229 MED14OSP0DP75 135 aa12.08□□□□□ -0.48
SURF4-209ENST00000618229 RPL32P62910 135 aaKnown RBP12.08□□□□□ -0.48
SURF4-209ENST00000618229 IGHV4-61A0A0C4DH41 118 aa12.08□□□□□ -0.48
SURF4-209ENST00000618229 MAPK1IP1LQ8NDC0 245 aa12.08□□□□□ -0.48
SURF4-209ENST00000618229 DCANP1Q8TF63 244 aa12.08□□□□□ -0.48
SURF4-209ENST00000618229 FBN2P35556 2912 aa12.08□□□□□ -0.48
SURF4-209ENST00000618229 NDUFA7O95182 113 aa12.07□□□□□ -0.48
SURF4-209ENST00000618229 FAM19A4Q96LR4 140 aa12.07□□□□□ -0.48
SURF4-209ENST00000618229 ABCA12Q86UK0 2595 aa12.07□□□□□ -0.48
SURF4-209ENST00000618229 FAM236AA0A1B0GUQ0 79 aa12.07□□□□□ -0.48
SURF4-209ENST00000618229 FAM236BA0A1B0GV22 79 aa12.07□□□□□ -0.48
SURF4-209ENST00000618229 HOXD3P31249 432 aaPredicted RBP12.07□□□□□ -0.48
SURF4-209ENST00000618229 KHDC1LQ5JSQ8 128 aa12.07□□□□□ -0.48
SURF4-209ENST00000618229 CDKN2A-AS1Q9UH64 79 aa12.07□□□□□ -0.48
SURF4-209ENST00000618229 TRAV13-1A0A0B4J241 112 aa12.06□□□□□ -0.48
SURF4-209ENST00000618229 DEFB136Q30KP8 78 aa12.06□□□□□ -0.48
SURF4-209ENST00000618229 CHD6Q8TD26 2715 aa12.06□□□□□ -0.48
SURF4-209ENST00000618229 USMG5Q96IX5 58 aa12.05□□□□□ -0.48
SURF4-209ENST00000618229 TRBV30A0A0K0K1B3 111 aa12.05□□□□□ -0.48
SURF4-209ENST00000618229 RHOHQ15669 191 aa12.05□□□□□ -0.48
SURF4-209ENST00000618229 NSUN5P1Q3KNT7 163 aa12.05□□□□□ -0.48
SURF4-209ENST00000618229 Q6ZSN1 163 aa12.05□□□□□ -0.48
SURF4-209ENST00000618229 IGHV3-53P01767 116 aa12.05□□□□□ -0.48
SURF4-209ENST00000618229 LRRK2Q5S007 2527 aa12.04□□□□□ -0.48
SURF4-209ENST00000618229 IGHV1-58A0A0C4DH39 117 aa12.04□□□□□ -0.48
SURF4-209ENST00000618229 NXPH4O95158 308 aa12.04□□□□□ -0.48
SURF4-209ENST00000618229 A0A0J9YX75 114 aa12.04□□□□□ -0.48
SURF4-209ENST00000618229 Q9H8V8 135 aa12.03□□□□□ -0.48
SURF4-209ENST00000618229 DEFB131AP59861 70 aa12.03□□□□□ -0.48
SURF4-209ENST00000618229 C9orf85Q96MD7 179 aa12.03□□□□□ -0.48
SURF4-209ENST00000618229 LINC00467Q9BRT7 94 aa12.03□□□□□ -0.48
SURF4-209ENST00000618229 TRBV6-5A0A0K0K1A5 114 aa12.03□□□□□ -0.48
SURF4-209ENST00000618229 C19orf84I3L1E1 186 aa12.03□□□□□ -0.48
SURF4-209ENST00000618229 LITAFQ99732 161 aa12.03□□□□□ -0.48
SURF4-209ENST00000618229 ZFYVE26Q68DK2 2539 aa12.03□□□□□ -0.48
SURF4-209ENST00000618229 FBXL19-AS1Q494R0 122 aa12.02□□□□□ -0.48
SURF4-209ENST00000618229 MIAQ16674 131 aa12.02□□□□□ -0.49
SURF4-209ENST00000618229 Q9HAA7 133 aa12.02□□□□□ -0.49
SURF4-209ENST00000618229 IGHG2P01859 326 aa12.01□□□□□ -0.49
SURF4-209ENST00000618229 RBMY1A1P0DJD3 496 aaKnown RBP12.01□□□□□ -0.49
SURF4-209ENST00000618229 RBMY1CP0DJD4 496 aa12.01□□□□□ -0.49
SURF4-209ENST00000618229 RBMY1FQ15415 496 aaKnown RBP12.01□□□□□ -0.49
SURF4-209ENST00000618229 VSIG2Q96IQ7 327 aa12.01□□□□□ -0.49
SURF4-209ENST00000618229 IGHV4-59P01825 116 aa12.01□□□□□ -0.49
SURF4-209ENST00000618229 CFHR3Q02985 330 aa12.01□□□□□ -0.49
SURF4-209ENST00000618229 TMEM61Q8N0U2 210 aa12.01□□□□□ -0.49
SURF4-209ENST00000618229 KLRB1Q12918 225 aa12□□□□□ -0.49
SURF4-209ENST00000618229 MRPL23Q16540 153 aaKnown RBP12□□□□□ -0.49
SURF4-209ENST00000618229 NRGNQ92686 78 aa12□□□□□ -0.49
SURF4-209ENST00000618229 LINC01587Q99440 93 aa12□□□□□ -0.49
SURF4-209ENST00000618229 NIPBLQ6KC79 2804 aaeCLIP12□□□□□ -0.49
SURF4-209ENST00000618229 GAGE2AQ6NT46 116 aa11.99□□□□□ -0.49
SURF4-209ENST00000618229 APRG1Q8IVJ8 170 aa11.99□□□□□ -0.49
SURF4-209ENST00000618229 Q8N2B8 174 aa11.99□□□□□ -0.49
SURF4-209ENST00000618229 TOMM7Q9P0U1 55 aa11.99□□□□□ -0.49
SURF4-209ENST00000618229 MXRA5Q9NR99 2828 aa11.99□□□□□ -0.49
SURF4-209ENST00000618229 COX6A2Q02221 97 aa11.99□□□□□ -0.49
SURF4-209ENST00000618229 KLK5Q9Y337 293 aaPredicted RBP11.99□□□□□ -0.49
SURF4-209ENST00000618229 NF1P21359 2839 aa11.99□□□□□ -0.49
SURF4-209ENST00000618229 CIRBPQ14011 172 aaKnown RBP11.98□□□□□ -0.49
SURF4-209ENST00000618229 PIK3CD-AS1Q5SR53 167 aa11.98□□□□□ -0.49
SURF4-209ENST00000618229 LST1O00453 97 aa11.98□□□□□ -0.49
SURF4-209ENST00000618229 AVPP01185 164 aa11.98□□□□□ -0.49
SURF4-209ENST00000618229 PRIMA1Q86XR5 153 aa11.98□□□□□ -0.49
SURF4-209ENST00000618229 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.98□□□□□ -0.49
SURF4-209ENST00000618229 UBE2E2Q96LR5 201 aa11.98□□□□□ -0.49
SURF4-209ENST00000618229 ANKRD17O75179 2603 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms