RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 UPK3BQ9BT76 320 aa6.51□□□□□ -1.37
PDE6A-204ENST00000613228 KLK5Q9Y337 293 aaPredicted RBP6.51□□□□□ -1.37
PDE6A-204ENST00000613228 FUSP35637 526 aaKnown RBP eCLIP6.51□□□□□ -1.37
PDE6A-204ENST00000613228 ZFAND2AQ8N6M9 145 aa6.51□□□□□ -1.37
PDE6A-204ENST00000613228 URB1-AS1Q96HZ7 61 aa6.51□□□□□ -1.37
PDE6A-204ENST00000613228 FAM186AA6NE01 2351 aa6.51□□□□□ -1.37
PDE6A-204ENST00000613228 TRIAP1O43715 76 aa6.51□□□□□ -1.37
PDE6A-204ENST00000613228 CFHR3Q02985 330 aa6.51□□□□□ -1.37
PDE6A-204ENST00000613228 UBE2DNLQ8IWF7 75 aa6.51□□□□□ -1.37
PDE6A-204ENST00000613228 CNFNQ9BYD5 112 aa6.51□□□□□ -1.37
PDE6A-204ENST00000613228 CACNA1DQ01668 2161 aa6.51□□□□□ -1.37
PDE6A-204ENST00000613228 H3BQ85 93 aa6.5□□□□□ -1.37
PDE6A-204ENST00000613228 IGHV3-30P01768 117 aa6.5□□□□□ -1.37
PDE6A-204ENST00000613228 IGHV3-30-5P0DP03 117 aa6.5□□□□□ -1.37
PDE6A-204ENST00000613228 MRGPRG-AS1Q2M3A8 158 aa6.5□□□□□ -1.37
PDE6A-204ENST00000613228 DPH3Q96FX2 82 aa6.5□□□□□ -1.37
PDE6A-204ENST00000613228 C4orf26Q17RF5 130 aa6.5□□□□□ -1.37
PDE6A-204ENST00000613228 KLLNB2CW77 178 aa6.5□□□□□ -1.37
PDE6A-204ENST00000613228 NXPH4O95158 308 aa6.5□□□□□ -1.37
PDE6A-204ENST00000613228 CRIP1P50238 77 aa6.5□□□□□ -1.37
PDE6A-204ENST00000613228 NEXN-AS1Q8NBZ9 246 aa6.5□□□□□ -1.37
PDE6A-204ENST00000613228 ZMAT4Q9H898 229 aa6.5□□□□□ -1.37
PDE6A-204ENST00000613228 MIAQ16674 131 aa6.49□□□□□ -1.37
PDE6A-204ENST00000613228 A0A1W2PPR1 153 aa6.49□□□□□ -1.37
PDE6A-204ENST00000613228 KLK9Q2XQG4 91 aa6.49□□□□□ -1.37
PDE6A-204ENST00000613228 FREM1Q5H8C1 2179 aa6.49□□□□□ -1.37
PDE6A-204ENST00000613228 TRBV6-5A0A0K0K1A5 114 aa6.49□□□□□ -1.37
PDE6A-204ENST00000613228 LST1O00453 97 aa6.49□□□□□ -1.37
PDE6A-204ENST00000613228 DEFB121Q5J5C9 76 aa6.49□□□□□ -1.37
PDE6A-204ENST00000613228 PRO0461Q9UI25 63 aa6.49□□□□□ -1.37
PDE6A-204ENST00000613228 OTOGLQ3ZCN5 2332 aa6.48□□□□□ -1.37
PDE6A-204ENST00000613228 SPTSSBQ8NFR3 76 aa6.48□□□□□ -1.37
PDE6A-204ENST00000613228 SHANK1Q9Y566 2161 aa6.48□□□□□ -1.37
PDE6A-204ENST00000613228 PTPRBP23467 1997 aa6.48□□□□□ -1.37
PDE6A-204ENST00000613228 IGHV3-38A0A0C4DH36 116 aa6.48□□□□□ -1.37
PDE6A-204ENST00000613228 PYGO1Q9Y3Y4 419 aa6.48□□□□□ -1.37
PDE6A-204ENST00000613228 UBE2D1P51668 147 aa6.48□□□□□ -1.37
PDE6A-204ENST00000613228 C20orf203Q8NBC4 194 aa6.48□□□□□ -1.37
PDE6A-204ENST00000613228 DEFB104AQ8WTQ1 72 aa6.48□□□□□ -1.37
PDE6A-204ENST00000613228 LINC00467Q9BRT7 94 aa6.48□□□□□ -1.37
PDE6A-204ENST00000613228 C14orf132Q9NPU4 83 aa6.48□□□□□ -1.37
PDE6A-204ENST00000613228 WFDC9Q8NEX5 89 aa6.47□□□□□ -1.37
PDE6A-204ENST00000613228 RNF185Q96GF1 192 aa6.47□□□□□ -1.37
PDE6A-204ENST00000613228 Q8N2B8 174 aa6.47□□□□□ -1.37
PDE6A-204ENST00000613228 DCANP1Q8TF63 244 aa6.47□□□□□ -1.37
PDE6A-204ENST00000613228 CACNA1HO95180 2353 aa6.47□□□□□ -1.37
PDE6A-204ENST00000613228 MALRD1Q5VYJ5 2156 aa6.47□□□□□ -1.37
PDE6A-204ENST00000613228 F8W735 103 aaPredicted RBP6.47□□□□□ -1.37
PDE6A-204ENST00000613228 C9orf85Q96MD7 179 aa6.47□□□□□ -1.37
PDE6A-204ENST00000613228 ACACAQ13085 2346 aa6.47□□□□□ -1.37
PDE6A-204ENST00000613228 LY6G6DO95868 133 aa6.46□□□□□ -1.37
PDE6A-204ENST00000613228 A0A0J9YXY3 114 aa6.46□□□□□ -1.38
PDE6A-204ENST00000613228 ZNF561-AS1K7EIQ3 104 aa6.46□□□□□ -1.38
PDE6A-204ENST00000613228 CNOT1A5YKK6 2376 aaKnown RBP6.46□□□□□ -1.38
PDE6A-204ENST00000613228 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.46□□□□□ -1.38
PDE6A-204ENST00000613228 IGKV2-29A2NJV5 120 aaPredicted RBP6.46□□□□□ -1.38
PDE6A-204ENST00000613228 UBE2BP63146 152 aa6.46□□□□□ -1.38
PDE6A-204ENST00000613228 RAI1Q7Z5J4 1906 aaPredicted RBP6.46□□□□□ -1.38
PDE6A-204ENST00000613228 HHLA3Q9XRX5 114 aa6.45□□□□□ -1.38
PDE6A-204ENST00000613228 ZGRF1Q86YA3 2104 aa6.45□□□□□ -1.38
PDE6A-204ENST00000613228 AVPP01185 164 aa6.45□□□□□ -1.38
PDE6A-204ENST00000613228 GYPEP15421 78 aa6.45□□□□□ -1.38
PDE6A-204ENST00000613228 LINC01006Q8NI28 216 aa6.45□□□□□ -1.38
PDE6A-204ENST00000613228 Q9H8V8 135 aa6.45□□□□□ -1.38
PDE6A-204ENST00000613228 PDE6GP18545 87 aa6.45□□□□□ -1.38
PDE6A-204ENST00000613228 SPTA1P02549 2419 aa6.44□□□□□ -1.38
PDE6A-204ENST00000613228 TRAV7A0A075B6U4 112 aa6.44□□□□□ -1.38
PDE6A-204ENST00000613228 IGHV1-58A0A0C4DH39 117 aa6.44□□□□□ -1.38
PDE6A-204ENST00000613228 PRO0255Q9UI72 69 aa6.44□□□□□ -1.38
PDE6A-204ENST00000613228 ENHOQ6UWT2 76 aa6.44□□□□□ -1.38
PDE6A-204ENST00000613228 C5orf38Q86SI9 138 aa6.44□□□□□ -1.38
PDE6A-204ENST00000613228 RTTNQ86VV8 2226 aa6.44□□□□□ -1.38
PDE6A-204ENST00000613228 TRBV6-4A0A1B0GX49 114 aa6.43□□□□□ -1.38
PDE6A-204ENST00000613228 F8WEM9 126 aa6.43□□□□□ -1.38
PDE6A-204ENST00000613228 TMEM256-PLSCR3K7ERE1 68 aa6.43□□□□□ -1.38
PDE6A-204ENST00000613228 SPRY2O43597 315 aa6.43□□□□□ -1.38
PDE6A-204ENST00000613228 A0A0J9YXV3 536 aa6.43□□□□□ -1.38
PDE6A-204ENST00000613228 UBE2AP49459 152 aa6.43□□□□□ -1.38
PDE6A-204ENST00000613228 RP1L1Q8IWN7 2480 aaPredicted RBP6.43□□□□□ -1.38
PDE6A-204ENST00000613228 VPREB1P12018 145 aa6.43□□□□□ -1.38
PDE6A-204ENST00000613228 MIFP14174 115 aa6.43□□□□□ -1.38
PDE6A-204ENST00000613228 SMCPP49901 116 aaPredicted RBP6.43□□□□□ -1.38
PDE6A-204ENST00000613228 TIRAPP58753 221 aa6.43□□□□□ -1.38
PDE6A-204ENST00000613228 TRBV27A0A0K0K1C4 114 aa6.43□□□□□ -1.38
PDE6A-204ENST00000613228 M0QY20 66 aa6.43□□□□□ -1.38
PDE6A-204ENST00000613228 ANGP03950 147 aaKnown RBP6.43□□□□□ -1.38
PDE6A-204ENST00000613228 COX7B2Q8TF08 81 aa6.42□□□□□ -1.38
PDE6A-204ENST00000613228 TMEM223A0PJW6 202 aa6.42□□□□□ -1.38
PDE6A-204ENST00000613228 SBSPONQ8IVN8 264 aa6.42□□□□□ -1.38
PDE6A-204ENST00000613228 LECT2O14960 151 aa6.42□□□□□ -1.38
PDE6A-204ENST00000613228 PSCAO43653 123 aa6.42□□□□□ -1.38
PDE6A-204ENST00000613228 RNASE3P12724 160 aaKnown RBP6.42□□□□□ -1.38
PDE6A-204ENST00000613228 DEFB1P60022 68 aa6.42□□□□□ -1.38
PDE6A-204ENST00000613228 HIST2H2BCQ6DN03 193 aa6.42□□□□□ -1.38
PDE6A-204ENST00000613228 HIST2H2BDQ6DRA6 164 aa6.42□□□□□ -1.38
PDE6A-204ENST00000613228 NRACQ8N912 160 aa6.42□□□□□ -1.38
PDE6A-204ENST00000613228 XCL1P47992 114 aa6.41□□□□□ -1.38
PDE6A-204ENST00000613228 INAFM1C9JVW0 142 aa6.41□□□□□ -1.38
PDE6A-204ENST00000613228 IGHV3-30-3P0DP02 117 aa6.41□□□□□ -1.38
PDE6A-204ENST00000613228 Q6ZS46 218 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms