RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 CTRLP40313 264 aa8.85□□□□□ -0.99
LINC00116-203ENST00000611969 RBX1P62877 108 aa8.85□□□□□ -0.99
LINC00116-203ENST00000611969 SMIM15Q7Z3B0 74 aa8.85□□□□□ -0.99
LINC00116-203ENST00000611969 PGLYRP4Q96LB8 373 aa8.85□□□□□ -0.99
LINC00116-203ENST00000611969 RPP21Q9H633 154 aaKnown RBP8.85□□□□□ -0.99
LINC00116-203ENST00000611969 TRAV8-4A0A0B4J246 113 aa8.84□□□□□ -0.99
LINC00116-203ENST00000611969 NDUFS6O75380 124 aaKnown RBP8.84□□□□□ -0.99
LINC00116-203ENST00000611969 GAGE6Q13070 117 aa8.84□□□□□ -0.99
LINC00116-203ENST00000611969 TWIST1Q15672 202 aa8.84□□□□□ -0.99
LINC00116-203ENST00000611969 DGAT2L7PQ6IED9 249 aa8.84□□□□□ -0.99
LINC00116-203ENST00000611969 TEX261Q6UWH6 196 aa8.84□□□□□ -0.99
LINC00116-203ENST00000611969 LYPD6BQ8NI32 183 aa8.84□□□□□ -0.99
LINC00116-203ENST00000611969 A8MWL6 223 aa8.83□□□□□ -1
LINC00116-203ENST00000611969 NKX2-5P52952 324 aaPredicted RBP8.83□□□□□ -1
LINC00116-203ENST00000611969 Q6ZRU5 148 aa8.83□□□□□ -1
LINC00116-203ENST00000611969 FAM231DQ6ZW35 169 aa8.83□□□□□ -1
LINC00116-203ENST00000611969 LINC00269Q8N2A0 174 aa8.83□□□□□ -1
LINC00116-203ENST00000611969 TMEM243Q9BU79 118 aa8.83□□□□□ -1
LINC00116-203ENST00000611969 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.83□□□□□ -1
LINC00116-203ENST00000611969 PANO1I0J062 215 aa8.82□□□□□ -1
LINC00116-203ENST00000611969 FOXA3P55318 350 aaPredicted RBP8.82□□□□□ -1
LINC00116-203ENST00000611969 COTL1Q14019 142 aa8.82□□□□□ -1
LINC00116-203ENST00000611969 ALKAL2Q6UX46 152 aa8.82□□□□□ -1
LINC00116-203ENST00000611969 CLRN3Q8NCR9 226 aa8.82□□□□□ -1
LINC00116-203ENST00000611969 RNASE7Q9H1E1 156 aaKnown RBP8.82□□□□□ -1
LINC00116-203ENST00000611969 hCG_2014768A0A024R1R8 64 aa8.81□□□□□ -1
LINC00116-203ENST00000611969 USP17L23D6RBM5 183 aa8.81□□□□□ -1
LINC00116-203ENST00000611969 K7EN84 100 aa8.81□□□□□ -1
LINC00116-203ENST00000611969 GATCO43716 136 aaKnown RBP8.81□□□□□ -1
LINC00116-203ENST00000611969 REG3AQ06141 175 aa8.81□□□□□ -1
LINC00116-203ENST00000611969 CT83Q5H943 113 aa8.81□□□□□ -1
LINC00116-203ENST00000611969 UBE2L6O14933 153 aa8.8□□□□□ -1
LINC00116-203ENST00000611969 GAS8-AS1O95177 125 aa8.8□□□□□ -1
LINC00116-203ENST00000611969 FAM210AQ96ND0 272 aa8.8□□□□□ -1
LINC00116-203ENST00000611969 EIF5A2Q9GZV4 153 aaKnown RBP8.8□□□□□ -1
LINC00116-203ENST00000611969 HLA-DQA1P01909 254 aa8.79□□□□□ -1
LINC00116-203ENST00000611969 AMTP48728 403 aa8.79□□□□□ -1
LINC00116-203ENST00000611969 KRTAP26-1Q6PEX3 210 aa8.79□□□□□ -1
LINC00116-203ENST00000611969 GATD1Q8NB37 220 aa8.79□□□□□ -1
LINC00116-203ENST00000611969 GTSF1Q8WW33 167 aa8.79□□□□□ -1
LINC00116-203ENST00000611969 FAM231BA6NCW3 169 aa8.78□□□□□ -1
LINC00116-203ENST00000611969 H7C423 109 aa8.78□□□□□ -1
LINC00116-203ENST00000611969 NCR2O95944 276 aa8.78□□□□□ -1
LINC00116-203ENST00000611969 PRSS1P07477 247 aa8.78□□□□□ -1
LINC00116-203ENST00000611969 C20orf203Q8NBC4 194 aa8.78□□□□□ -1
LINC00116-203ENST00000611969 BORCS7Q96B45 105 aa8.78□□□□□ -1
LINC00116-203ENST00000611969 C9orf163Q8N9P6 203 aa8.77□□□□□ -1.01
LINC00116-203ENST00000611969 SMIM7Q9BQ49 75 aa8.77□□□□□ -1.01
LINC00116-203ENST00000611969 GFRA4Q9GZZ7 299 aa8.77□□□□□ -1.01
LINC00116-203ENST00000611969 IGLV4-60A0A075B6I1 120 aa8.76□□□□□ -1.01
LINC00116-203ENST00000611969 CEBPGP53567 150 aa8.76□□□□□ -1.01
LINC00116-203ENST00000611969 CLPSL2Q6UWE3 100 aa8.76□□□□□ -1.01
LINC00116-203ENST00000611969 OSTCQ9NRP0 149 aa8.76□□□□□ -1.01
LINC00116-203ENST00000611969 TRBV6-5A0A0K0K1A5 114 aa8.75□□□□□ -1.01
LINC00116-203ENST00000611969 A0A1B0GUT8 65 aa8.75□□□□□ -1.01
LINC00116-203ENST00000611969 CFAP161Q6P656 301 aa8.75□□□□□ -1.01
LINC00116-203ENST00000611969 TSKUQ8WUA8 353 aa8.75□□□□□ -1.01
LINC00116-203ENST00000611969 AP5S1Q9NUS5 200 aa8.75□□□□□ -1.01
LINC00116-203ENST00000611969 IGLV10-54A0A075B6I4 117 aa8.74□□□□□ -1.01
LINC00116-203ENST00000611969 SDHAF1A6NFY7 115 aa8.74□□□□□ -1.01
LINC00116-203ENST00000611969 ZNF727A8MUV8 499 aa8.74□□□□□ -1.01
LINC00116-203ENST00000611969 PMCHP20382 165 aa8.74□□□□□ -1.01
LINC00116-203ENST00000611969 CNBPP62633 177 aaKnown RBP8.74□□□□□ -1.01
LINC00116-203ENST00000611969 FAM74A3Q4VXF1 159 aa8.74□□□□□ -1.01
LINC00116-203ENST00000611969 AMMECR1LQ6DCA0 310 aa8.74□□□□□ -1.01
LINC00116-203ENST00000611969 LINC01551Q86U37 167 aa8.74□□□□□ -1.01
LINC00116-203ENST00000611969 KRTAP9-2Q9BYQ4 174 aa8.74□□□□□ -1.01
LINC00116-203ENST00000611969 TMEM191AQ9H0A3 160 aa8.74□□□□□ -1.01
LINC00116-203ENST00000611969 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.73□□□□□ -1.01
LINC00116-203ENST00000611969 TRAV26-2A0A0B4J265 109 aa8.73□□□□□ -1.01
LINC00116-203ENST00000611969 HIGD1CA8MV81 97 aa8.73□□□□□ -1.01
LINC00116-203ENST00000611969 I3L3M4 83 aa8.73□□□□□ -1.01
LINC00116-203ENST00000611969 SRP19P09132 144 aaKnown RBP8.73□□□□□ -1.01
LINC00116-203ENST00000611969 PPP1R17O96001 155 aa8.72□□□□□ -1.01
LINC00116-203ENST00000611969 APCSP02743 223 aa8.72□□□□□ -1.01
LINC00116-203ENST00000611969 ZNF25P17030 456 aaPredicted RBP8.72□□□□□ -1.01
LINC00116-203ENST00000611969 TMEM241Q24JQ0 296 aa8.72□□□□□ -1.01
LINC00116-203ENST00000611969 SDIM1Q6ZPB5 146 aa8.72□□□□□ -1.01
LINC00116-203ENST00000611969 RPL39LQ96EH5 51 aaKnown RBP8.72□□□□□ -1.01
LINC00116-203ENST00000611969 hDV102S1A0JD36 115 aa8.71□□□□□ -1.02
LINC00116-203ENST00000611969 RIGQ13278 110 aa8.71□□□□□ -1.02
LINC00116-203ENST00000611969 RNASEKQ6P5S7 137 aaKnown RBP8.71□□□□□ -1.02
LINC00116-203ENST00000611969 MRAP2Q96G30 205 aa8.71□□□□□ -1.02
LINC00116-203ENST00000611969 BTF3L4Q96K17 158 aa8.71□□□□□ -1.02
LINC00116-203ENST00000611969 LINC01600Q96MT4 127 aa8.71□□□□□ -1.02
LINC00116-203ENST00000611969 ST20Q9HBF5 79 aa8.71□□□□□ -1.02
LINC00116-203ENST00000611969 FGF6P10767 208 aa8.7□□□□□ -1.02
LINC00116-203ENST00000611969 TMEM101Q96IK0 257 aa8.7□□□□□ -1.02
LINC00116-203ENST00000611969 SMDT1Q9H4I9 107 aa8.7□□□□□ -1.02
LINC00116-203ENST00000611969 IGHV3-64A0A075B6Q5 118 aa8.69□□□□□ -1.02
LINC00116-203ENST00000611969 RAB4AP20338 218 aa8.69□□□□□ -1.02
LINC00116-203ENST00000611969 POLR2KP53803 58 aaKnown RBP8.69□□□□□ -1.02
LINC00116-203ENST00000611969 CIRBPQ14011 172 aaKnown RBP8.69□□□□□ -1.02
LINC00116-203ENST00000611969 LPAP08519 4548 aa8.69□□□□□ -1.02
LINC00116-203ENST00000611969 TRBV27A0A0K0K1C4 114 aa8.68□□□□□ -1.02
LINC00116-203ENST00000611969 GAGE12HA6NDE8 117 aa8.68□□□□□ -1.02
LINC00116-203ENST00000611969 VCYO14598 125 aa8.68□□□□□ -1.02
LINC00116-203ENST00000611969 CHTF8P0CG12 524 aa8.68□□□□□ -1.02
LINC00116-203ENST00000611969 ESDP10768 282 aa8.68□□□□□ -1.02
LINC00116-203ENST00000611969 SMAGPQ0VAQ4 97 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms