RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 SDIM1Q6ZPB5 146 aa9.53□□□□□ -0.88
CTSA-216ENST00000607212 TMEM243Q9BU79 118 aa9.53□□□□□ -0.88
CTSA-216ENST00000607212 MLST8Q9BVC4 326 aa9.53□□□□□ -0.88
CTSA-216ENST00000607212 HMCN2Q8NDA2 5059 aa9.53□□□□□ -0.88
CTSA-216ENST00000607212 UMAD1C9J7I0 102 aa9.52□□□□□ -0.89
CTSA-216ENST00000607212 H2AFB1P0C5Y9 115 aa9.52□□□□□ -0.89
CTSA-216ENST00000607212 RPL35P42766 123 aaKnown RBP9.52□□□□□ -0.89
CTSA-216ENST00000607212 SUMO4Q6EEV6 95 aa9.52□□□□□ -0.89
CTSA-216ENST00000607212 FER1L6-AS1Q8NA97 138 aa9.52□□□□□ -0.89
CTSA-216ENST00000607212 OR2D3Q8NGH3 330 aa9.52□□□□□ -0.89
CTSA-216ENST00000607212 MBD3L1Q8WWY6 194 aa9.52□□□□□ -0.89
CTSA-216ENST00000607212 KIF25-AS1Q9Y6Z4 181 aa9.52□□□□□ -0.89
CTSA-216ENST00000607212 TRAV8-4A0A0B4J246 113 aa9.51□□□□□ -0.89
CTSA-216ENST00000607212 IGKV3OR2-268A0A0C4DH90 116 aa9.51□□□□□ -0.89
CTSA-216ENST00000607212 SNAPINO95295 136 aa9.51□□□□□ -0.89
CTSA-216ENST00000607212 P01737 135 aa9.51□□□□□ -0.89
CTSA-216ENST00000607212 RPS20P60866 119 aaKnown RBP9.51□□□□□ -0.89
CTSA-216ENST00000607212 PEA15Q15121 130 aa9.51□□□□□ -0.89
CTSA-216ENST00000607212 M0QY20 66 aa9.5□□□□□ -0.89
CTSA-216ENST00000607212 CHTF8P0CG12 524 aa9.5□□□□□ -0.89
CTSA-216ENST00000607212 CACNG7P62955 275 aa9.5□□□□□ -0.89
CTSA-216ENST00000607212 CENPWQ5EE01 88 aa9.5□□□□□ -0.89
CTSA-216ENST00000607212 KRTAP26-1Q6PEX3 210 aa9.5□□□□□ -0.89
CTSA-216ENST00000607212 Q6ZRU5 148 aa9.5□□□□□ -0.89
CTSA-216ENST00000607212 C20orf203Q8NBC4 194 aa9.5□□□□□ -0.89
CTSA-216ENST00000607212 GNG13Q9P2W3 67 aa9.5□□□□□ -0.89
CTSA-216ENST00000607212 IGLV4-60A0A075B6I1 120 aa9.49□□□□□ -0.89
CTSA-216ENST00000607212 XKRY2A2RUG3 117 aa9.49□□□□□ -0.89
CTSA-216ENST00000607212 TRGC1P0CF51 173 aa9.49□□□□□ -0.89
CTSA-216ENST00000607212 AMTP48728 403 aa9.49□□□□□ -0.89
CTSA-216ENST00000607212 CNBPP62633 177 aaKnown RBP9.49□□□□□ -0.89
CTSA-216ENST00000607212 RASL11AQ6T310 242 aa9.49□□□□□ -0.89
CTSA-216ENST00000607212 UBR4Q5T4S7 5183 aa9.48□□□□□ -0.89
CTSA-216ENST00000607212 A0A087WYN8 130 aa9.48□□□□□ -0.89
CTSA-216ENST00000607212 CCL20P78556 96 aa9.48□□□□□ -0.89
CTSA-216ENST00000607212 COTL1Q14019 142 aa9.48□□□□□ -0.89
CTSA-216ENST00000607212 CBLN2Q8IUK8 224 aa9.48□□□□□ -0.89
CTSA-216ENST00000607212 C7orf33Q8WU49 177 aa9.48□□□□□ -0.89
CTSA-216ENST00000607212 MANBALQ9NQG1 85 aa9.48□□□□□ -0.89
CTSA-216ENST00000607212 GAGE12HA6NDE8 117 aa9.47□□□□□ -0.89
CTSA-216ENST00000607212 IFNA1P01562 189 aa9.47□□□□□ -0.89
CTSA-216ENST00000607212 GNG4P50150 75 aa9.47□□□□□ -0.89
CTSA-216ENST00000607212 CFAP161Q6P656 301 aa9.47□□□□□ -0.89
CTSA-216ENST00000607212 RNF185Q96GF1 192 aa9.47□□□□□ -0.89
CTSA-216ENST00000607212 GFRA4Q9GZZ7 299 aa9.47□□□□□ -0.89
CTSA-216ENST00000607212 IGKV2-24A0A0C4DH68 120 aa9.46□□□□□ -0.9
CTSA-216ENST00000607212 A0A1B0GUV1 79 aa9.46□□□□□ -0.9
CTSA-216ENST00000607212 IGLC6P0CF74 106 aa9.46□□□□□ -0.9
CTSA-216ENST00000607212 AMMECR1LQ6DCA0 310 aa9.46□□□□□ -0.9
CTSA-216ENST00000607212 GTSF1Q8WW33 167 aa9.46□□□□□ -0.9
CTSA-216ENST00000607212 NIT2Q9NQR4 276 aa9.46□□□□□ -0.9
CTSA-216ENST00000607212 TRAV1-1A0A0B4J248 108 aa9.45□□□□□ -0.9
CTSA-216ENST00000607212 F2Z2F3 143 aa9.45□□□□□ -0.9
CTSA-216ENST00000607212 PHOX2AO14813 284 aa9.45□□□□□ -0.9
CTSA-216ENST00000607212 MAJINQ3KP22 176 aa9.45□□□□□ -0.9
CTSA-216ENST00000607212 HIGD2BQ4VC39 106 aa9.45□□□□□ -0.9
CTSA-216ENST00000607212 LYZL1Q6UWQ5 148 aa9.45□□□□□ -0.9
CTSA-216ENST00000607212 SPACA4Q8TDM5 124 aa9.45□□□□□ -0.9
CTSA-216ENST00000607212 EIF5A2Q9GZV4 153 aaKnown RBP9.45□□□□□ -0.9
CTSA-216ENST00000607212 SMDT1Q9H4I9 107 aa9.45□□□□□ -0.9
CTSA-216ENST00000607212 SRP19P09132 144 aaKnown RBP9.44□□□□□ -0.9
CTSA-216ENST00000607212 MT1HL1P0DM35 61 aa9.44□□□□□ -0.9
CTSA-216ENST00000607212 COX6A2Q02221 97 aa9.44□□□□□ -0.9
CTSA-216ENST00000607212 CIRBPQ14011 172 aaKnown RBP9.44□□□□□ -0.9
CTSA-216ENST00000607212 TWIST1Q15672 202 aa9.44□□□□□ -0.9
CTSA-216ENST00000607212 RNASEKQ6P5S7 137 aaKnown RBP9.44□□□□□ -0.9
CTSA-216ENST00000607212 C11orf52Q96A22 123 aa9.44□□□□□ -0.9
CTSA-216ENST00000607212 PGLYRP4Q96LB8 373 aa9.44□□□□□ -0.9
CTSA-216ENST00000607212 SMCO4Q9NRQ5 59 aa9.44□□□□□ -0.9
CTSA-216ENST00000607212 COLCA2A8K830 154 aa9.43□□□□□ -0.9
CTSA-216ENST00000607212 SLPIP03973 132 aa9.43□□□□□ -0.9
CTSA-216ENST00000607212 NTF3P20783 257 aa9.43□□□□□ -0.9
CTSA-216ENST00000607212 BIN3Q9NQY0 253 aa9.43□□□□□ -0.9
CTSA-216ENST00000607212 C7orf77A4D0Y5 90 aa9.42□□□□□ -0.9
CTSA-216ENST00000607212 C19orf71A6NCJ1 209 aa9.42□□□□□ -0.9
CTSA-216ENST00000607212 RPS10P46783 165 aaKnown RBP9.42□□□□□ -0.9
CTSA-216ENST00000607212 NDUFS6O75380 124 aaKnown RBP9.41□□□□□ -0.9
CTSA-216ENST00000607212 SMIM15Q7Z3B0 74 aa9.41□□□□□ -0.9
CTSA-216ENST00000607212 C15orf56Q8N910 161 aa9.41□□□□□ -0.9
CTSA-216ENST00000607212 PLAC8Q9NZF1 115 aa9.41□□□□□ -0.9
CTSA-216ENST00000607212 TRAV26-2A0A0B4J265 109 aa9.4□□□□□ -0.9
CTSA-216ENST00000607212 PDE6DO43924 150 aa9.4□□□□□ -0.9
CTSA-216ENST00000607212 APCSP02743 223 aa9.4□□□□□ -0.9
CTSA-216ENST00000607212 STPG4Q8N801 248 aa9.4□□□□□ -0.9
CTSA-216ENST00000607212 PRSS3P2Q8NHM4 247 aa9.4□□□□□ -0.9
CTSA-216ENST00000607212 CHCHD10Q8WYQ3 142 aaPredicted RBP9.4□□□□□ -0.9
CTSA-216ENST00000607212 SMIM12Q96EX1 92 aa9.4□□□□□ -0.9
CTSA-216ENST00000607212 RPS10P5Q9NQ39 176 aa9.4□□□□□ -0.9
CTSA-216ENST00000607212 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.39□□□□□ -0.91
CTSA-216ENST00000607212 IGKV2-29A2NJV5 120 aaPredicted RBP9.39□□□□□ -0.91
CTSA-216ENST00000607212 MEF2BQ02080 365 aaPredicted RBP9.39□□□□□ -0.91
CTSA-216ENST00000607212 RHEBQ15382 184 aa9.39□□□□□ -0.91
CTSA-216ENST00000607212 GATD1Q8NB37 220 aa9.38□□□□□ -0.91
CTSA-216ENST00000607212 NUDT10Q8NFP7 164 aa9.38□□□□□ -0.91
CTSA-216ENST00000607212 NUDT11Q96G61 164 aa9.38□□□□□ -0.91
CTSA-216ENST00000607212 BTF3L4Q96K17 158 aa9.38□□□□□ -0.91
CTSA-216ENST00000607212 BCL2P10415 239 aa9.37□□□□□ -0.91
CTSA-216ENST00000607212 CTRLP40313 264 aa9.37□□□□□ -0.91
CTSA-216ENST00000607212 RPL39LQ96EH5 51 aaKnown RBP9.37□□□□□ -0.91
CTSA-216ENST00000607212 TMEM101Q96IK0 257 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms