RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 USP17L23D6RBM5 183 aa9.58□□□□□ -0.88
SSBP4-214ENST00000607020 PRSS1P07477 247 aa9.58□□□□□ -0.88
SSBP4-214ENST00000607020 SMIM17P0DL12 118 aa9.58□□□□□ -0.88
SSBP4-214ENST00000607020 CIRBPQ14011 172 aaKnown RBP9.58□□□□□ -0.88
SSBP4-214ENST00000607020 WDR73Q6P4I2 378 aa9.58□□□□□ -0.88
SSBP4-214ENST00000607020 KCNIP4Q6PIL6 250 aa9.58□□□□□ -0.88
SSBP4-214ENST00000607020 TSKUQ8WUA8 353 aa9.58□□□□□ -0.88
SSBP4-214ENST00000607020 KIF25-AS1Q9Y6Z4 181 aa9.58□□□□□ -0.88
SSBP4-214ENST00000607020 V9GYV3 84 aa9.58□□□□□ -0.88
SSBP4-214ENST00000607020 PANO1I0J062 215 aa9.57□□□□□ -0.88
SSBP4-214ENST00000607020 NTF3P20783 257 aa9.57□□□□□ -0.88
SSBP4-214ENST00000607020 FOXA3P55318 350 aaPredicted RBP9.57□□□□□ -0.88
SSBP4-214ENST00000607020 RAB4BP61018 213 aa9.57□□□□□ -0.88
SSBP4-214ENST00000607020 ZNF56Q15929 161 aa9.57□□□□□ -0.88
SSBP4-214ENST00000607020 GFRA4Q9GZZ7 299 aa9.57□□□□□ -0.88
SSBP4-214ENST00000607020 FAM231BA6NCW3 169 aa9.56□□□□□ -0.88
SSBP4-214ENST00000607020 TRGC1P0CF51 173 aa9.56□□□□□ -0.88
SSBP4-214ENST00000607020 UQCC3Q6UW78 93 aa9.56□□□□□ -0.88
SSBP4-214ENST00000607020 OR10G8Q8NGN5 311 aa9.56□□□□□ -0.88
SSBP4-214ENST00000607020 PGLYRP4Q96LB8 373 aa9.56□□□□□ -0.88
SSBP4-214ENST00000607020 TRBV10-1A0A0K0K1A3 114 aa9.55□□□□□ -0.88
SSBP4-214ENST00000607020 HIGD1CA8MV81 97 aa9.55□□□□□ -0.88
SSBP4-214ENST00000607020 TWIST1Q15672 202 aa9.55□□□□□ -0.88
SSBP4-214ENST00000607020 F5H697 171 aa9.54□□□□□ -0.88
SSBP4-214ENST00000607020 LINC01600Q96MT4 127 aa9.54□□□□□ -0.88
SSBP4-214ENST00000607020 TMEM262E9PQX1 116 aa9.53□□□□□ -0.88
SSBP4-214ENST00000607020 CRPP02741 224 aa9.53□□□□□ -0.88
SSBP4-214ENST00000607020 MGPP08493 103 aa9.53□□□□□ -0.88
SSBP4-214ENST00000607020 UBE2D3P61077 147 aa9.53□□□□□ -0.88
SSBP4-214ENST00000607020 UBE2D2P62837 147 aa9.53□□□□□ -0.88
SSBP4-214ENST00000607020 PNRC1Q12796 327 aaPredicted RBP9.53□□□□□ -0.88
SSBP4-214ENST00000607020 MIAQ16674 131 aa9.53□□□□□ -0.88
SSBP4-214ENST00000607020 COMMD7Q86VX2 200 aa9.53□□□□□ -0.88
SSBP4-214ENST00000607020 BORCS7Q96B45 105 aa9.53□□□□□ -0.88
SSBP4-214ENST00000607020 RNF185Q96GF1 192 aa9.53□□□□□ -0.88
SSBP4-214ENST00000607020 DPH3P1Q9H4G8 78 aa9.53□□□□□ -0.88
SSBP4-214ENST00000607020 TRBV7-3A0A075B6L6 115 aa9.52□□□□□ -0.89
SSBP4-214ENST00000607020 TRBV6-8A0A0A6YYG3 113 aa9.52□□□□□ -0.89
SSBP4-214ENST00000607020 A0A1B0GUT8 65 aa9.52□□□□□ -0.89
SSBP4-214ENST00000607020 TMEM218A2RU14 115 aa9.52□□□□□ -0.89
SSBP4-214ENST00000607020 RPL36AP83881 106 aaKnown RBP9.52□□□□□ -0.89
SSBP4-214ENST00000607020 KRTAP26-1Q6PEX3 210 aa9.52□□□□□ -0.89
SSBP4-214ENST00000607020 CLRN3Q8NCR9 226 aa9.52□□□□□ -0.89
SSBP4-214ENST00000607020 RPL36ALQ969Q0 106 aaKnown RBP9.52□□□□□ -0.89
SSBP4-214ENST00000607020 NAT8BQ9UHF3 227 aa9.52□□□□□ -0.89
SSBP4-214ENST00000607020 SMIM27A0A1W2PRY6 76 aa9.51□□□□□ -0.89
SSBP4-214ENST00000607020 LINC00862A6NCI5 91 aa9.51□□□□□ -0.89
SSBP4-214ENST00000607020 ADCYAP1P18509 176 aa9.51□□□□□ -0.89
SSBP4-214ENST00000607020 CNBPP62633 177 aaKnown RBP9.51□□□□□ -0.89
SSBP4-214ENST00000607020 SUMO4Q6EEV6 95 aa9.51□□□□□ -0.89
SSBP4-214ENST00000607020 SMIM15Q7Z3B0 74 aa9.51□□□□□ -0.89
SSBP4-214ENST00000607020 NEXN-AS1Q8NBZ9 246 aa9.51□□□□□ -0.89
SSBP4-214ENST00000607020 NUP35Q8NFH5 326 aa9.51□□□□□ -0.89
SSBP4-214ENST00000607020 PRR34Q9NV39 138 aa9.51□□□□□ -0.89
SSBP4-214ENST00000607020 H7C1H1 209 aa9.5□□□□□ -0.89
SSBP4-214ENST00000607020 M0QY20 66 aa9.5□□□□□ -0.89
SSBP4-214ENST00000607020 HLA-DQA1P01909 254 aa9.5□□□□□ -0.89
SSBP4-214ENST00000607020 ANGP03950 147 aaKnown RBP9.5□□□□□ -0.89
SSBP4-214ENST00000607020 PKIAP61925 76 aa9.5□□□□□ -0.89
SSBP4-214ENST00000607020 MPV17L2Q567V2 206 aa9.5□□□□□ -0.89
SSBP4-214ENST00000607020 F8W036 122 aa9.49□□□□□ -0.89
SSBP4-214ENST00000607020 PPP1R2P9O14990 202 aa9.49□□□□□ -0.89
SSBP4-214ENST00000607020 A0A087WYN8 130 aa9.48□□□□□ -0.89
SSBP4-214ENST00000607020 RIGQ13278 110 aa9.48□□□□□ -0.89
SSBP4-214ENST00000607020 RASL11AQ6T310 242 aa9.48□□□□□ -0.89
SSBP4-214ENST00000607020 SEC11CQ9BY50 192 aa9.48□□□□□ -0.89
SSBP4-214ENST00000607020 MT-ND4LP03901 98 aa9.47□□□□□ -0.89
SSBP4-214ENST00000607020 KRTAP10-8P60410 259 aa9.47□□□□□ -0.89
SSBP4-214ENST00000607020 TMEM191AQ9H0A3 160 aa9.47□□□□□ -0.89
SSBP4-214ENST00000607020 PLAC8Q9NZF1 115 aa9.47□□□□□ -0.89
SSBP4-214ENST00000607020 TRAV26-2A0A0B4J265 109 aa9.46□□□□□ -0.9
SSBP4-214ENST00000607020 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.46□□□□□ -0.9
SSBP4-214ENST00000607020 GATD1Q8NB37 220 aa9.46□□□□□ -0.9
SSBP4-214ENST00000607020 SPACA4Q8TDM5 124 aa9.46□□□□□ -0.9
SSBP4-214ENST00000607020 ANAPC16Q96DE5 110 aa9.46□□□□□ -0.9
SSBP4-214ENST00000607020 DPH3Q96FX2 82 aa9.46□□□□□ -0.9
SSBP4-214ENST00000607020 NIT2Q9NQR4 276 aa9.46□□□□□ -0.9
SSBP4-214ENST00000607020 IGHV3-64A0A075B6Q5 118 aa9.45□□□□□ -0.9
SSBP4-214ENST00000607020 A0A0J9YXV3 536 aa9.45□□□□□ -0.9
SSBP4-214ENST00000607020 A0A1B0GW15 77 aa9.45□□□□□ -0.9
SSBP4-214ENST00000607020 PHOX2AO14813 284 aa9.44□□□□□ -0.9
SSBP4-214ENST00000607020 GAS8-AS1O95177 125 aa9.44□□□□□ -0.9
SSBP4-214ENST00000607020 TMEM97Q5BJF2 176 aa9.44□□□□□ -0.9
SSBP4-214ENST00000607020 C7orf33Q8WU49 177 aa9.44□□□□□ -0.9
SSBP4-214ENST00000607020 CHCHD5Q9BSY4 110 aa9.44□□□□□ -0.9
SSBP4-214ENST00000607020 SLPIP03973 132 aa9.43□□□□□ -0.9
SSBP4-214ENST00000607020 CAMPP49913 170 aa9.43□□□□□ -0.9
SSBP4-214ENST00000607020 RBX1P62877 108 aa9.43□□□□□ -0.9
SSBP4-214ENST00000607020 ODF1Q14990 250 aa9.43□□□□□ -0.9
SSBP4-214ENST00000607020 C10orf91Q5T1B1 145 aa9.43□□□□□ -0.9
SSBP4-214ENST00000607020 MRPL54Q6P161 138 aaKnown RBP9.43□□□□□ -0.9
SSBP4-214ENST00000607020 NTM-AS1Q6ZSK4 140 aa9.43□□□□□ -0.9
SSBP4-214ENST00000607020 AMN1Q8IY45 258 aa9.43□□□□□ -0.9
SSBP4-214ENST00000607020 LINC00269Q8N2A0 174 aa9.43□□□□□ -0.9
SSBP4-214ENST00000607020 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.42□□□□□ -0.9
SSBP4-214ENST00000607020 A0A1B0GXF2 115 aa9.42□□□□□ -0.9
SSBP4-214ENST00000607020 CHTF8P0CG12 524 aa9.42□□□□□ -0.9
SSBP4-214ENST00000607020 RAB4AP20338 218 aa9.42□□□□□ -0.9
SSBP4-214ENST00000607020 HBBP68871 147 aa9.42□□□□□ -0.9
SSBP4-214ENST00000607020 ATP5L2Q7Z4Y8 100 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms