RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 EIF4EBP3O60516 100 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-225ENST00000600733 SIGMAR1Q99720 223 aa14.75□□□□□ -0.05
SHKBP1-225ENST00000600733 Q5PR19 223 aa14.74□□□□□ -0.05
SHKBP1-225ENST00000600733 CHD6Q8TD26 2715 aa14.74□□□□□ -0.05
SHKBP1-225ENST00000600733 UBR5O95071 2799 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-225ENST00000600733 ADARB2-AS1A8MUL3 147 aa14.73□□□□□ -0.05
SHKBP1-225ENST00000600733 PTH2Q96A98 100 aa14.73□□□□□ -0.05
SHKBP1-225ENST00000600733 C1QTNF4Q9BXJ3 329 aa14.73□□□□□ -0.05
SHKBP1-225ENST00000600733 PYGO1Q9Y3Y4 419 aa14.73□□□□□ -0.05
SHKBP1-225ENST00000600733 A8MWV9 139 aa14.73□□□□□ -0.05
SHKBP1-225ENST00000600733 SMAGPQ0VAQ4 97 aa14.73□□□□□ -0.05
SHKBP1-225ENST00000600733 SPATA25Q9BR10 227 aa14.73□□□□□ -0.05
SHKBP1-225ENST00000600733 LYRM7Q5U5X0 104 aa14.72□□□□□ -0.05
SHKBP1-225ENST00000600733 RAX2Q96IS3 184 aa14.72□□□□□ -0.05
SHKBP1-225ENST00000600733 MAP6D1Q9H9H5 199 aa14.72□□□□□ -0.05
SHKBP1-225ENST00000600733 PRRC2AP48634 2157 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-225ENST00000600733 IGHV3-30-3P0DP02 117 aa14.72□□□□□ -0.05
SHKBP1-225ENST00000600733 ZNF415Q09FC8 603 aa14.72□□□□□ -0.05
SHKBP1-225ENST00000600733 FOXI1Q12951 378 aa14.72□□□□□ -0.05
SHKBP1-225ENST00000600733 MUSTN1Q8IVN3 82 aa14.72□□□□□ -0.05
SHKBP1-225ENST00000600733 EPG5Q9HCE0 2579 aa14.71□□□□□ -0.05
SHKBP1-225ENST00000600733 TRAV8-3A0A0A6YYJ7 113 aa14.71□□□□□ -0.05
SHKBP1-225ENST00000600733 PEMTQ9UBM1 199 aa14.71□□□□□ -0.05
SHKBP1-225ENST00000600733 AKAP9Q99996 3911 aa14.71□□□□□ -0.05
SHKBP1-225ENST00000600733 MRPS36P82909 103 aaKnown RBP14.71□□□□□ -0.06
SHKBP1-225ENST00000600733 Q8N2B8 174 aa14.71□□□□□ -0.06
SHKBP1-225ENST00000600733 LINC01587Q99440 93 aa14.71□□□□□ -0.06
SHKBP1-225ENST00000600733 SCGB1C2P0DMR2 95 aa14.7□□□□□ -0.06
SHKBP1-225ENST00000600733 DYNLRB2Q8TF09 96 aa14.7□□□□□ -0.06
SHKBP1-225ENST00000600733 TIMM21Q9BVV7 248 aa14.7□□□□□ -0.06
SHKBP1-225ENST00000600733 A0A0J9YXY3 114 aa14.69□□□□□ -0.06
SHKBP1-225ENST00000600733 C4orf3Q8WVX3 66 aa14.69□□□□□ -0.06
SHKBP1-225ENST00000600733 CHCHD7Q9BUK0 85 aa14.69□□□□□ -0.06
SHKBP1-225ENST00000600733 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-225ENST00000600733 IGHV3-38A0A0C4DH36 116 aa14.69□□□□□ -0.06
SHKBP1-225ENST00000600733 IGKV2-29A2NJV5 120 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-225ENST00000600733 H7C2G1 150 aa14.69□□□□□ -0.06
SHKBP1-225ENST00000600733 C11orf72Q8NBR9 251 aa14.69□□□□□ -0.06
SHKBP1-225ENST00000600733 TMEM263Q8WUH6 116 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-225ENST00000600733 TRBV20-1A0A075B6N2 111 aa14.68□□□□□ -0.06
SHKBP1-225ENST00000600733 ATP6V0E2Q8NHE4 81 aa14.68□□□□□ -0.06
SHKBP1-225ENST00000600733 BBC3Q96PG8 261 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-225ENST00000600733 SONP18583 2426 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-225ENST00000600733 NF1P21359 2839 aa14.68□□□□□ -0.06
SHKBP1-225ENST00000600733 WNK1Q9H4A3 2382 aa14.68□□□□□ -0.06
SHKBP1-225ENST00000600733 IGHV3-33P01772 117 aa14.68□□□□□ -0.06
SHKBP1-225ENST00000600733 UBE2D4Q9Y2X8 147 aa14.67□□□□□ -0.06
SHKBP1-225ENST00000600733 DEFB114Q30KQ6 69 aa14.67□□□□□ -0.06
SHKBP1-225ENST00000600733 A8MZ25 164 aa14.66□□□□□ -0.06
SHKBP1-225ENST00000600733 LINC00467Q9BRT7 94 aa14.66□□□□□ -0.06
SHKBP1-225ENST00000600733 DEFB113Q30KQ7 82 aa14.66□□□□□ -0.06
SHKBP1-225ENST00000600733 PIK3CD-AS1Q5SR53 167 aa14.66□□□□□ -0.06
SHKBP1-225ENST00000600733 Q96MF0 132 aa14.66□□□□□ -0.06
SHKBP1-225ENST00000600733 CRYBA4P53673 196 aa14.65□□□□□ -0.06
SHKBP1-225ENST00000600733 Q6ZUT4 128 aa14.65□□□□□ -0.06
SHKBP1-225ENST00000600733 LITAFQ99732 161 aa14.65□□□□□ -0.06
SHKBP1-225ENST00000600733 A0A0B4J2C4 111 aa14.64□□□□□ -0.07
SHKBP1-225ENST00000600733 ERG28Q9UKR5 140 aa14.64□□□□□ -0.07
SHKBP1-225ENST00000600733 APCP25054 2843 aa14.64□□□□□ -0.07
SHKBP1-225ENST00000600733 IGHV1-58A0A0C4DH39 117 aa14.64□□□□□ -0.07
SHKBP1-225ENST00000600733 INSP01308 110 aa14.64□□□□□ -0.07
SHKBP1-225ENST00000600733 IGHV3-53P01767 116 aa14.64□□□□□ -0.07
SHKBP1-225ENST00000600733 TEN1Q86WV5 123 aa14.64□□□□□ -0.07
SHKBP1-225ENST00000600733 CARD19Q96LW7 228 aa14.64□□□□□ -0.07
SHKBP1-225ENST00000600733 XCL2Q9UBD3 114 aa14.64□□□□□ -0.07
SHKBP1-225ENST00000600733 SPINK8P0C7L1 97 aa14.63□□□□□ -0.07
SHKBP1-225ENST00000600733 SPANXA1Q9NS26 97 aa14.63□□□□□ -0.07
SHKBP1-225ENST00000600733 ADAMTSL4-AS1Q5T5F5 129 aa14.63□□□□□ -0.07
SHKBP1-225ENST00000600733 NDUFA12Q9UI09 145 aa14.63□□□□□ -0.07
SHKBP1-225ENST00000600733 TINCRA0A1B0GVN0 87 aa14.62□□□□□ -0.07
SHKBP1-225ENST00000600733 PRSS2P07478 247 aa14.62□□□□□ -0.07
SHKBP1-225ENST00000600733 FHL3Q13643 280 aa14.62□□□□□ -0.07
SHKBP1-225ENST00000600733 SBSPONQ8IVN8 264 aa14.62□□□□□ -0.07
SHKBP1-225ENST00000600733 BEAN1Q3B7T3 259 aa14.62□□□□□ -0.07
SHKBP1-225ENST00000600733 VSIG2Q96IQ7 327 aa14.62□□□□□ -0.07
SHKBP1-225ENST00000600733 ITPR3Q14573 2671 aa14.61□□□□□ -0.07
SHKBP1-225ENST00000600733 IGHV3OR16-12A0A075B7B8 117 aa14.61□□□□□ -0.07
SHKBP1-225ENST00000600733 Q1RN00 199 aa14.61□□□□□ -0.07
SHKBP1-225ENST00000600733 C11orf44Q8N8P7 122 aa14.61□□□□□ -0.07
SHKBP1-225ENST00000600733 NIPBLQ6KC79 2804 aaeCLIP14.61□□□□□ -0.07
SHKBP1-225ENST00000600733 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-225ENST00000600733 SCGB1A1P11684 91 aa14.61□□□□□ -0.07
SHKBP1-225ENST00000600733 ODF3L2Q3SX64 289 aa14.61□□□□□ -0.07
SHKBP1-225ENST00000600733 PPDPFLQ8WWR9 84 aa14.61□□□□□ -0.07
SHKBP1-225ENST00000600733 CDIP1Q9H305 208 aa14.61□□□□□ -0.07
SHKBP1-225ENST00000600733 ANKRD29Q8N6D5 301 aa14.6□□□□□ -0.07
SHKBP1-225ENST00000600733 NBPF19A0A087WUL8 3843 aa14.6□□□□□ -0.07
SHKBP1-225ENST00000600733 RS1O15537 224 aa14.59□□□□□ -0.07
SHKBP1-225ENST00000600733 NOTCH3Q9UM47 2321 aa14.59□□□□□ -0.07
SHKBP1-225ENST00000600733 C9JAW5 83 aa14.59□□□□□ -0.07
SHKBP1-225ENST00000600733 NPC2P61916 151 aa14.59□□□□□ -0.07
SHKBP1-225ENST00000600733 SETD2Q9BYW2 2564 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-225ENST00000600733 A0A1W2PRX2 142 aa14.58□□□□□ -0.08
SHKBP1-225ENST00000600733 Q6ZSV7 163 aa14.58□□□□□ -0.08
SHKBP1-225ENST00000600733 DNAJC30Q96LL9 226 aa14.58□□□□□ -0.08
SHKBP1-225ENST00000600733 GEMIN7Q9H840 131 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-225ENST00000600733 SLC25A20O43772 301 aa14.58□□□□□ -0.08
SHKBP1-225ENST00000600733 CDKN2A-AS1Q9UH64 79 aa14.57□□□□□ -0.08
SHKBP1-225ENST00000600733 KRTAP1-3Q8IUG1 177 aa14.57□□□□□ -0.08
SHKBP1-225ENST00000600733 ZNF843Q8N446 348 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms