RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 C7orf33Q8WU49 177 aa7.75□□□□□ -1.17
HOMER3-211ENST00000599808 C11orf52Q96A22 123 aa7.75□□□□□ -1.17
HOMER3-211ENST00000599808 LPAP08519 4548 aa7.75□□□□□ -1.17
HOMER3-211ENST00000599808 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.74□□□□□ -1.17
HOMER3-211ENST00000599808 A0A0J9YXV3 536 aa7.74□□□□□ -1.17
HOMER3-211ENST00000599808 KRTAP10-8P60410 259 aa7.74□□□□□ -1.17
HOMER3-211ENST00000599808 ZNF674Q2M3X9 581 aa7.74□□□□□ -1.17
HOMER3-211ENST00000599808 C7orf77A4D0Y5 90 aa7.73□□□□□ -1.17
HOMER3-211ENST00000599808 ZNF727A8MUV8 499 aa7.73□□□□□ -1.17
HOMER3-211ENST00000599808 CEBPGP53567 150 aa7.73□□□□□ -1.17
HOMER3-211ENST00000599808 UBE2G2P60604 165 aa7.73□□□□□ -1.17
HOMER3-211ENST00000599808 PRR3P79522 188 aaKnown RBP7.73□□□□□ -1.17
HOMER3-211ENST00000599808 REG3AQ06141 175 aa7.73□□□□□ -1.17
HOMER3-211ENST00000599808 TMEM97Q5BJF2 176 aa7.73□□□□□ -1.17
HOMER3-211ENST00000599808 CST9LP1Q5W188 147 aa7.73□□□□□ -1.17
HOMER3-211ENST00000599808 WDR73Q6P4I2 378 aa7.73□□□□□ -1.17
HOMER3-211ENST00000599808 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.73□□□□□ -1.17
HOMER3-211ENST00000599808 SMIM7Q9BQ49 75 aa7.73□□□□□ -1.17
HOMER3-211ENST00000599808 SMCO4Q9NRQ5 59 aa7.73□□□□□ -1.17
HOMER3-211ENST00000599808 AP5S1Q9NUS5 200 aa7.73□□□□□ -1.17
HOMER3-211ENST00000599808 NAT8Q9UHE5 227 aa7.73□□□□□ -1.17
HOMER3-211ENST00000599808 ZFP30Q9Y2G7 519 aa7.73□□□□□ -1.17
HOMER3-211ENST00000599808 TRBV25-1A0A075B6N4 114 aa7.72□□□□□ -1.17
HOMER3-211ENST00000599808 TRBV6-1A0A0K0K1D8 114 aa7.72□□□□□ -1.17
HOMER3-211ENST00000599808 CBLN2Q8IUK8 224 aa7.72□□□□□ -1.17
HOMER3-211ENST00000599808 OR10AG1Q8NH19 301 aa7.72□□□□□ -1.17
HOMER3-211ENST00000599808 GTSF1Q8WW33 167 aa7.72□□□□□ -1.17
HOMER3-211ENST00000599808 HIST1H2BAQ96A08 127 aa7.72□□□□□ -1.17
HOMER3-211ENST00000599808 TCEAL7Q9BRU2 100 aa7.72□□□□□ -1.17
HOMER3-211ENST00000599808 DERL1Q9BUN8 251 aa7.72□□□□□ -1.17
HOMER3-211ENST00000599808 RPS10P5Q9NQ39 176 aa7.72□□□□□ -1.17
HOMER3-211ENST00000599808 TMEM241Q24JQ0 296 aa7.71□□□□□ -1.18
HOMER3-211ENST00000599808 C20orf203Q8NBC4 194 aa7.71□□□□□ -1.18
HOMER3-211ENST00000599808 TRAV8-4A0A0B4J246 113 aa7.7□□□□□ -1.18
HOMER3-211ENST00000599808 MUC21A0A0G2JKD1 596 aa7.7□□□□□ -1.18
HOMER3-211ENST00000599808 SCO2A0A1W2PP80 73 aa7.7□□□□□ -1.18
HOMER3-211ENST00000599808 P01737 135 aa7.7□□□□□ -1.18
HOMER3-211ENST00000599808 COX6A2Q02221 97 aa7.7□□□□□ -1.18
HOMER3-211ENST00000599808 IQCJQ1A5X6 159 aa7.7□□□□□ -1.18
HOMER3-211ENST00000599808 FMC1Q96HJ9 113 aa7.7□□□□□ -1.18
HOMER3-211ENST00000599808 GFRA4Q9GZZ7 299 aa7.7□□□□□ -1.18
HOMER3-211ENST00000599808 TMEM242Q9NWH2 141 aa7.7□□□□□ -1.18
HOMER3-211ENST00000599808 MUC21A0A140T8X8 626 aa7.69□□□□□ -1.18
HOMER3-211ENST00000599808 F5H697 171 aa7.69□□□□□ -1.18
HOMER3-211ENST00000599808 LTAP01374 205 aa7.69□□□□□ -1.18
HOMER3-211ENST00000599808 UBE2G1P62253 170 aa7.69□□□□□ -1.18
HOMER3-211ENST00000599808 RPL23P62829 140 aaKnown RBP7.69□□□□□ -1.18
HOMER3-211ENST00000599808 MAJINQ3KP22 176 aa7.69□□□□□ -1.18
HOMER3-211ENST00000599808 PRSS3P2Q8NHM4 247 aa7.69□□□□□ -1.18
HOMER3-211ENST00000599808 YPEL4Q96NS1 127 aa7.69□□□□□ -1.18
HOMER3-211ENST00000599808 CTDSP1Q9GZU7 261 aa7.69□□□□□ -1.18
HOMER3-211ENST00000599808 IGLV4-60A0A075B6I1 120 aa7.68□□□□□ -1.18
HOMER3-211ENST00000599808 IGHV1-24A0A0C4DH33 117 aa7.68□□□□□ -1.18
HOMER3-211ENST00000599808 IGKV2-24A0A0C4DH68 120 aa7.68□□□□□ -1.18
HOMER3-211ENST00000599808 COLCA2A8K830 154 aa7.68□□□□□ -1.18
HOMER3-211ENST00000599808 AKR1C3P42330 323 aa7.68□□□□□ -1.18
HOMER3-211ENST00000599808 REG3GQ6UW15 175 aa7.68□□□□□ -1.18
HOMER3-211ENST00000599808 LINC01551Q86U37 167 aa7.68□□□□□ -1.18
HOMER3-211ENST00000599808 C15orf56Q8N910 161 aa7.68□□□□□ -1.18
HOMER3-211ENST00000599808 TRBV20OR9-2A0A075B6H5 130 aa7.67□□□□□ -1.18
HOMER3-211ENST00000599808 SNAI2O43623 268 aa7.67□□□□□ -1.18
HOMER3-211ENST00000599808 GZMBP10144 247 aa7.67□□□□□ -1.18
HOMER3-211ENST00000599808 ADIRFQ15847 76 aa7.67□□□□□ -1.18
HOMER3-211ENST00000599808 SPINK6Q6UWN8 80 aa7.67□□□□□ -1.18
HOMER3-211ENST00000599808 STPG4Q8N801 248 aa7.67□□□□□ -1.18
HOMER3-211ENST00000599808 SSBP4Q9BWG4 385 aaPredicted RBP7.67□□□□□ -1.18
HOMER3-211ENST00000599808 A0A1B0GUV1 79 aa7.66□□□□□ -1.18
HOMER3-211ENST00000599808 MT-ND4LP03901 98 aa7.66□□□□□ -1.18
HOMER3-211ENST00000599808 CXCL1P09341 107 aa7.66□□□□□ -1.18
HOMER3-211ENST00000599808 RPL35P42766 123 aaKnown RBP7.66□□□□□ -1.18
HOMER3-211ENST00000599808 RPS10P46783 165 aaKnown RBP7.66□□□□□ -1.18
HOMER3-211ENST00000599808 SSTP61278 116 aa7.66□□□□□ -1.18
HOMER3-211ENST00000599808 SPANXN1Q5VSR9 72 aa7.66□□□□□ -1.18
HOMER3-211ENST00000599808 ISOC2Q96AB3 205 aa7.66□□□□□ -1.18
HOMER3-211ENST00000599808 ANAPC16Q96DE5 110 aa7.66□□□□□ -1.18
HOMER3-211ENST00000599808 OR5AL1P0C617 328 aa7.65□□□□□ -1.18
HOMER3-211ENST00000599808 SRSF9Q13242 221 aaKnown RBP eCLIP7.65□□□□□ -1.18
HOMER3-211ENST00000599808 TMA7Q9Y2S6 64 aaKnown RBP7.65□□□□□ -1.18
HOMER3-211ENST00000599808 A0A096LNI7 61 aa7.64□□□□□ -1.19
HOMER3-211ENST00000599808 M0QY20 66 aa7.64□□□□□ -1.19
HOMER3-211ENST00000599808 PPP1R2P9O14990 202 aa7.64□□□□□ -1.19
HOMER3-211ENST00000599808 S100A9P06702 114 aaKnown RBP7.64□□□□□ -1.19
HOMER3-211ENST00000599808 SMIM17P0DL12 118 aa7.64□□□□□ -1.19
HOMER3-211ENST00000599808 HIGD2BQ4VC39 106 aa7.64□□□□□ -1.19
HOMER3-211ENST00000599808 TMEM243Q9BU79 118 aa7.64□□□□□ -1.19
HOMER3-211ENST00000599808 MUC2Q02817 5179 aa7.64□□□□□ -1.19
HOMER3-211ENST00000599808 GAGE12HA6NDE8 117 aa7.63□□□□□ -1.19
HOMER3-211ENST00000599808 K7EN84 100 aa7.63□□□□□ -1.19
HOMER3-211ENST00000599808 GNG4P50150 75 aa7.63□□□□□ -1.19
HOMER3-211ENST00000599808 CENPWQ5EE01 88 aa7.63□□□□□ -1.19
HOMER3-211ENST00000599808 CFAP161Q6P656 301 aa7.63□□□□□ -1.19
HOMER3-211ENST00000599808 OCC1Q8TAD7 63 aa7.63□□□□□ -1.19
HOMER3-211ENST00000599808 SMIM12Q96EX1 92 aa7.63□□□□□ -1.19
HOMER3-211ENST00000599808 AP1S3Q96PC3 154 aa7.63□□□□□ -1.19
HOMER3-211ENST00000599808 TRBV24-1A0A075B6N3 115 aa7.62□□□□□ -1.19
HOMER3-211ENST00000599808 RAB5AP20339 215 aa7.62□□□□□ -1.19
HOMER3-211ENST00000599808 IMMP2LQ96T52 175 aa7.62□□□□□ -1.19
HOMER3-211ENST00000599808 MGPP08493 103 aa7.61□□□□□ -1.19
HOMER3-211ENST00000599808 SUMO4Q6EEV6 95 aa7.61□□□□□ -1.19
HOMER3-211ENST00000599808 Q6ZRP5 223 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms