RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 CITED1Q99966 193 aa12.06□□□□□ -0.48
LIG1-206ENST00000594067 SPXQ9BT56 116 aa12.06□□□□□ -0.48
LIG1-206ENST00000594067 A0A0J9YXY3 114 aa12.05□□□□□ -0.48
LIG1-206ENST00000594067 RBMY1BA6NDE4 496 aaKnown RBP12.05□□□□□ -0.48
LIG1-206ENST00000594067 RBMY1EA6NEQ0 496 aaKnown RBP12.05□□□□□ -0.48
LIG1-206ENST00000594067 J3QLI3 93 aa12.05□□□□□ -0.48
LIG1-206ENST00000594067 RBMY1DP0C7P1 496 aaKnown RBP12.05□□□□□ -0.48
LIG1-206ENST00000594067 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.05□□□□□ -0.48
LIG1-206ENST00000594067 ADARB2-AS1A8MUL3 147 aa12.05□□□□□ -0.48
LIG1-206ENST00000594067 ZFAND6Q6FIF0 208 aa12.05□□□□□ -0.48
LIG1-206ENST00000594067 Q6YL49 198 aa12.05□□□□□ -0.48
LIG1-206ENST00000594067 DUX3Q96PT4 197 aa12.05□□□□□ -0.48
LIG1-206ENST00000594067 POLQO75417 2590 aa12.05□□□□□ -0.48
LIG1-206ENST00000594067 FAM104AQ969W3 186 aa12.04□□□□□ -0.48
LIG1-206ENST00000594067 LINC01620Q4KN68 170 aa12.04□□□□□ -0.48
LIG1-206ENST00000594067 NTN5Q8WTR8 489 aaPredicted RBP12.04□□□□□ -0.48
LIG1-206ENST00000594067 PIEZO1Q92508 2521 aa12.04□□□□□ -0.48
LIG1-206ENST00000594067 H3BMM0 161 aa12.04□□□□□ -0.48
LIG1-206ENST00000594067 Q6ZSN1 163 aa12.04□□□□□ -0.48
LIG1-206ENST00000594067 TEX29Q8N6K0 151 aa12.04□□□□□ -0.48
LIG1-206ENST00000594067 TNFRSF18Q9Y5U5 241 aa12.04□□□□□ -0.48
LIG1-206ENST00000594067 IGSF10Q6WRI0 2623 aa12.03□□□□□ -0.48
LIG1-206ENST00000594067 IGHV3-30-3P0DP02 117 aa12.03□□□□□ -0.48
LIG1-206ENST00000594067 ATXN8Q156A1 80 aa12.03□□□□□ -0.48
LIG1-206ENST00000594067 Q1RN00 199 aa12.03□□□□□ -0.48
LIG1-206ENST00000594067 HIST2H2BDQ6DRA6 164 aa12.03□□□□□ -0.48
LIG1-206ENST00000594067 LITAFQ99732 161 aa12.03□□□□□ -0.48
LIG1-206ENST00000594067 LINC01600Q96MT4 127 aa12.03□□□□□ -0.48
LIG1-206ENST00000594067 ANAPC13Q9BS18 74 aa12.03□□□□□ -0.48
LIG1-206ENST00000594067 TRAV8-3A0A0A6YYJ7 113 aa12.02□□□□□ -0.49
LIG1-206ENST00000594067 TRBV30A0A0K0K1B3 111 aa12.02□□□□□ -0.49
LIG1-206ENST00000594067 FBN2P35556 2912 aa12.02□□□□□ -0.49
LIG1-206ENST00000594067 PRRC2AP48634 2157 aaKnown RBP12.02□□□□□ -0.49
LIG1-206ENST00000594067 PYGO1Q9Y3Y4 419 aa12.02□□□□□ -0.49
LIG1-206ENST00000594067 TMEM61Q8N0U2 210 aa12.01□□□□□ -0.49
LIG1-206ENST00000594067 TIMM21Q9BVV7 248 aa12.01□□□□□ -0.49
LIG1-206ENST00000594067 ANKRD17O75179 2603 aaKnown RBP12.01□□□□□ -0.49
LIG1-206ENST00000594067 MYO18BQ8IUG5 2567 aa12.01□□□□□ -0.49
LIG1-206ENST00000594067 TRIAP1O43715 76 aa12.01□□□□□ -0.49
LIG1-206ENST00000594067 EDA2RQ9HAV5 297 aa12.01□□□□□ -0.49
LIG1-206ENST00000594067 MXRA5Q9NR99 2828 aa12.01□□□□□ -0.49
LIG1-206ENST00000594067 FSHBP01225 129 aa12□□□□□ -0.49
LIG1-206ENST00000594067 TEX49A0A1B0GTD5 131 aa12□□□□□ -0.49
LIG1-206ENST00000594067 NHLRC4P0CG21 123 aaPredicted RBP12□□□□□ -0.49
LIG1-206ENST00000594067 MRPS36P82909 103 aaKnown RBP12□□□□□ -0.49
LIG1-206ENST00000594067 KHDC1LQ5JSQ8 128 aa12□□□□□ -0.49
LIG1-206ENST00000594067 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.99□□□□□ -0.49
LIG1-206ENST00000594067 TRBV10-2A0A0K0K1G8 114 aa11.99□□□□□ -0.49
LIG1-206ENST00000594067 IGKV2-29A2NJV5 120 aaPredicted RBP11.99□□□□□ -0.49
LIG1-206ENST00000594067 CRLF1O75462 422 aa11.99□□□□□ -0.49
LIG1-206ENST00000594067 IGHV4-31P0DP07 118 aa11.99□□□□□ -0.49
LIG1-206ENST00000594067 ADAMTSL4-AS1Q5T5F5 129 aa11.99□□□□□ -0.49
LIG1-206ENST00000594067 TRAV4A0A0B4J268 109 aa11.99□□□□□ -0.49
LIG1-206ENST00000594067 IGHV3-38A0A0C4DH36 116 aa11.99□□□□□ -0.49
LIG1-206ENST00000594067 ZNF415Q09FC8 603 aa11.99□□□□□ -0.49
LIG1-206ENST00000594067 A8MZ25 164 aa11.98□□□□□ -0.49
LIG1-206ENST00000594067 PRSS2P07478 247 aa11.98□□□□□ -0.49
LIG1-206ENST00000594067 RPL13AP40429 203 aaKnown RBP11.98□□□□□ -0.49
LIG1-206ENST00000594067 LINC01587Q99440 93 aa11.98□□□□□ -0.49
LIG1-206ENST00000594067 CHCHD7Q9BUK0 85 aa11.98□□□□□ -0.49
LIG1-206ENST00000594067 ACACBO00763 2458 aa11.98□□□□□ -0.49
LIG1-206ENST00000594067 A8MTW9 85 aa11.98□□□□□ -0.49
LIG1-206ENST00000594067 SVIPQ8NHG7 77 aa11.98□□□□□ -0.49
LIG1-206ENST00000594067 SNCGO76070 127 aa11.97□□□□□ -0.49
LIG1-206ENST00000594067 GAGE2BQ13066 116 aa11.97□□□□□ -0.49
LIG1-206ENST00000594067 GAGE2EQ4V326 116 aa11.97□□□□□ -0.49
LIG1-206ENST00000594067 MAP6D1Q9H9H5 199 aa11.97□□□□□ -0.49
LIG1-206ENST00000594067 GAGE2DQ9UEU5 116 aa11.97□□□□□ -0.49
LIG1-206ENST00000594067 IGHV1-58A0A0C4DH39 117 aa11.96□□□□□ -0.49
LIG1-206ENST00000594067 UBE2D4Q9Y2X8 147 aa11.96□□□□□ -0.49
LIG1-206ENST00000594067 CENPEQ02224 2701 aa11.96□□□□□ -0.49
LIG1-206ENST00000594067 CACNA1AO00555 2505 aa11.96□□□□□ -0.49
LIG1-206ENST00000594067 DYNLRB2Q8TF09 96 aa11.96□□□□□ -0.5
LIG1-206ENST00000594067 LINC00467Q9BRT7 94 aa11.96□□□□□ -0.5
LIG1-206ENST00000594067 FAM208BQ5VWN6 2430 aa11.96□□□□□ -0.5
LIG1-206ENST00000594067 PRB1P04280 392 aa11.95□□□□□ -0.5
LIG1-206ENST00000594067 SPANXDQ9BXN6 97 aa11.95□□□□□ -0.5
LIG1-206ENST00000594067 SPANXCQ9NY87 97 aa11.95□□□□□ -0.5
LIG1-206ENST00000594067 PEMTQ9UBM1 199 aa11.95□□□□□ -0.5
LIG1-206ENST00000594067 NDUFA12Q9UI09 145 aa11.95□□□□□ -0.5
LIG1-206ENST00000594067 ICOSQ9Y6W8 199 aa11.95□□□□□ -0.5
LIG1-206ENST00000594067 NACAE9PAV3 2078 aa11.95□□□□□ -0.5
LIG1-206ENST00000594067 GAGE5Q13069 117 aa11.95□□□□□ -0.5
LIG1-206ENST00000594067 GAGE6Q13070 117 aa11.95□□□□□ -0.5
LIG1-206ENST00000594067 NPC2P61916 151 aa11.94□□□□□ -0.5
LIG1-206ENST00000594067 Q6ZSV7 163 aa11.94□□□□□ -0.5
LIG1-206ENST00000594067 C11orf72Q8NBR9 251 aa11.94□□□□□ -0.5
LIG1-206ENST00000594067 TINCRA0A1B0GVN0 87 aa11.94□□□□□ -0.5
LIG1-206ENST00000594067 H7C423 109 aa11.94□□□□□ -0.5
LIG1-206ENST00000594067 KRTAP10-9P60411 292 aa11.94□□□□□ -0.5
LIG1-206ENST00000594067 SPANXA1Q9NS26 97 aa11.94□□□□□ -0.5
LIG1-206ENST00000594067 TRAV8-4A0A0B4J246 113 aa11.94□□□□□ -0.5
LIG1-206ENST00000594067 NDUFV3P56181 108 aaKnown RBP11.94□□□□□ -0.5
LIG1-206ENST00000594067 UBE2WQ96B02 151 aa11.94□□□□□ -0.5
LIG1-206ENST00000594067 VSIG2Q96IQ7 327 aa11.94□□□□□ -0.5
LIG1-206ENST00000594067 C2orf82Q6UX34 121 aa11.93□□□□□ -0.5
LIG1-206ENST00000594067 MIAQ16674 131 aa11.93□□□□□ -0.5
LIG1-206ENST00000594067 IGHV3-53P01767 116 aa11.92□□□□□ -0.5
LIG1-206ENST00000594067 DEFB114Q30KQ6 69 aa11.92□□□□□ -0.5
LIG1-206ENST00000594067 PIK3CD-AS1Q5SR53 167 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms