RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 NUDT10Q8NFP7 164 aa8.58□□□□□ -1.04
PRKCSH-218ENST00000593053 OCC1Q8TAD7 63 aa8.58□□□□□ -1.04
PRKCSH-218ENST00000593053 NUDT11Q96G61 164 aa8.58□□□□□ -1.04
PRKCSH-218ENST00000593053 VPS13BQ7Z7G8 4022 aa8.57□□□□□ -1.04
PRKCSH-218ENST00000593053 TRBV25-1A0A075B6N4 114 aa8.57□□□□□ -1.04
PRKCSH-218ENST00000593053 TRGC1P0CF51 173 aa8.57□□□□□ -1.04
PRKCSH-218ENST00000593053 NTF3P20783 257 aa8.57□□□□□ -1.04
PRKCSH-218ENST00000593053 RBX1P62877 108 aa8.57□□□□□ -1.04
PRKCSH-218ENST00000593053 ADIRFQ15847 76 aa8.57□□□□□ -1.04
PRKCSH-218ENST00000593053 SRRM2Q9UQ35 2752 aaKnown RBP8.57□□□□□ -1.04
PRKCSH-218ENST00000593053 IGHV1-24A0A0C4DH33 117 aa8.56□□□□□ -1.04
PRKCSH-218ENST00000593053 IQCJQ1A5X6 159 aa8.56□□□□□ -1.04
PRKCSH-218ENST00000593053 CLPSL2Q6UWE3 100 aa8.56□□□□□ -1.04
PRKCSH-218ENST00000593053 ISOC2Q96AB3 205 aa8.56□□□□□ -1.04
PRKCSH-218ENST00000593053 RNASE7Q9H1E1 156 aaKnown RBP8.56□□□□□ -1.04
PRKCSH-218ENST00000593053 DPH3P1Q9H4G8 78 aa8.56□□□□□ -1.04
PRKCSH-218ENST00000593053 RPP21Q9H633 154 aaKnown RBP8.56□□□□□ -1.04
PRKCSH-218ENST00000593053 RPS10P5Q9NQ39 176 aa8.56□□□□□ -1.04
PRKCSH-218ENST00000593053 MYCBP2O75592 4640 aa8.55□□□□□ -1.04
PRKCSH-218ENST00000593053 HLA-DQA1P01909 254 aa8.55□□□□□ -1.04
PRKCSH-218ENST00000593053 CTRLP40313 264 aa8.55□□□□□ -1.04
PRKCSH-218ENST00000593053 MIAQ16674 131 aa8.55□□□□□ -1.04
PRKCSH-218ENST00000593053 C14orf177Q52M58 125 aa8.55□□□□□ -1.04
PRKCSH-218ENST00000593053 RASL11AQ6T310 242 aa8.55□□□□□ -1.04
PRKCSH-218ENST00000593053 LINC00269Q8N2A0 174 aa8.55□□□□□ -1.04
PRKCSH-218ENST00000593053 YPEL4Q96NS1 127 aa8.55□□□□□ -1.04
PRKCSH-218ENST00000593053 USP17L23D6RBM5 183 aa8.54□□□□□ -1.04
PRKCSH-218ENST00000593053 PNRC1Q12796 327 aaPredicted RBP8.54□□□□□ -1.04
PRKCSH-218ENST00000593053 RHEBQ15382 184 aa8.54□□□□□ -1.04
PRKCSH-218ENST00000593053 TWIST1Q15672 202 aa8.54□□□□□ -1.04
PRKCSH-218ENST00000593053 WDR73Q6P4I2 378 aa8.54□□□□□ -1.04
PRKCSH-218ENST00000593053 DEFB104AQ8WTQ1 72 aa8.54□□□□□ -1.04
PRKCSH-218ENST00000593053 PRR34Q9NV39 138 aa8.54□□□□□ -1.04
PRKCSH-218ENST00000593053 SCXQ7RTU7 201 aa8.53□□□□□ -1.04
PRKCSH-218ENST00000593053 LINC00528Q8N1L1 170 aa8.53□□□□□ -1.04
PRKCSH-218ENST00000593053 TMEM243Q9BU79 118 aa8.53□□□□□ -1.04
PRKCSH-218ENST00000593053 NIT2Q9NQR4 276 aa8.53□□□□□ -1.04
PRKCSH-218ENST00000593053 PLA2G1BP04054 148 aaKnown RBP8.52□□□□□ -1.05
PRKCSH-218ENST00000593053 CHAC1Q9BUX1 264 aa8.52□□□□□ -1.05
PRKCSH-218ENST00000593053 CNFNQ9BYD5 112 aa8.52□□□□□ -1.05
PRKCSH-218ENST00000593053 DMBT1Q9UGM3 2413 aaPredicted RBP8.51□□□□□ -1.05
PRKCSH-218ENST00000593053 REG3AQ06141 175 aa8.51□□□□□ -1.05
PRKCSH-218ENST00000593053 KRTAP26-1Q6PEX3 210 aa8.51□□□□□ -1.05
PRKCSH-218ENST00000593053 C20orf203Q8NBC4 194 aa8.51□□□□□ -1.05
PRKCSH-218ENST00000593053 GTSF1Q8WW33 167 aa8.51□□□□□ -1.05
PRKCSH-218ENST00000593053 PGLYRP4Q96LB8 373 aa8.51□□□□□ -1.05
PRKCSH-218ENST00000593053 FLG2Q5D862 2391 aaPredicted RBP8.51□□□□□ -1.05
PRKCSH-218ENST00000593053 IGLV4-60A0A075B6I1 120 aa8.5□□□□□ -1.05
PRKCSH-218ENST00000593053 IGLV10-54A0A075B6I4 117 aa8.5□□□□□ -1.05
PRKCSH-218ENST00000593053 TRAV26-2A0A0B4J265 109 aa8.5□□□□□ -1.05
PRKCSH-218ENST00000593053 GATCO43716 136 aaKnown RBP8.5□□□□□ -1.05
PRKCSH-218ENST00000593053 PRSS1P07477 247 aa8.5□□□□□ -1.05
PRKCSH-218ENST00000593053 AMTP48728 403 aa8.5□□□□□ -1.05
PRKCSH-218ENST00000593053 COTL1Q14019 142 aa8.5□□□□□ -1.05
PRKCSH-218ENST00000593053 GATD1Q8NB37 220 aa8.5□□□□□ -1.05
PRKCSH-218ENST00000593053 V9GYV3 84 aa8.5□□□□□ -1.05
PRKCSH-218ENST00000593053 COLCA2A8K830 154 aa8.49□□□□□ -1.05
PRKCSH-218ENST00000593053 UBE2L6O14933 153 aa8.49□□□□□ -1.05
PRKCSH-218ENST00000593053 FOXA3P55318 350 aaPredicted RBP8.49□□□□□ -1.05
PRKCSH-218ENST00000593053 SMIM15Q7Z3B0 74 aa8.49□□□□□ -1.05
PRKCSH-218ENST00000593053 CIRBP-AS1Q8TBR5 109 aa8.49□□□□□ -1.05
PRKCSH-218ENST00000593053 GFRA4Q9GZZ7 299 aa8.49□□□□□ -1.05
PRKCSH-218ENST00000593053 SMCO4Q9NRQ5 59 aa8.49□□□□□ -1.05
PRKCSH-218ENST00000593053 A0A1B0GUV1 79 aa8.48□□□□□ -1.05
PRKCSH-218ENST00000593053 A8MWL6 223 aa8.48□□□□□ -1.05
PRKCSH-218ENST00000593053 FAM231DQ6ZW35 169 aa8.48□□□□□ -1.05
PRKCSH-218ENST00000593053 ANAPC16Q96DE5 110 aa8.48□□□□□ -1.05
PRKCSH-218ENST00000593053 RPL39LQ96EH5 51 aaKnown RBP8.48□□□□□ -1.05
PRKCSH-218ENST00000593053 CTDSP1Q9GZU7 261 aa8.48□□□□□ -1.05
PRKCSH-218ENST00000593053 OSTCQ9NRP0 149 aa8.48□□□□□ -1.05
PRKCSH-218ENST00000593053 TGIF2-C20orf24A0A0A6YYL0 155 aa8.47□□□□□ -1.05
PRKCSH-218ENST00000593053 TRAV8-4A0A0B4J246 113 aa8.47□□□□□ -1.05
PRKCSH-218ENST00000593053 MT-ND4LP03901 98 aa8.47□□□□□ -1.05
PRKCSH-218ENST00000593053 DGAT2L7PQ6IED9 249 aa8.47□□□□□ -1.05
PRKCSH-218ENST00000593053 TMEM242Q9NWH2 141 aa8.47□□□□□ -1.05
PRKCSH-218ENST00000593053 CT83Q5H943 113 aa8.45□□□□□ -1.06
PRKCSH-218ENST00000593053 C9orf163Q8N9P6 203 aa8.45□□□□□ -1.06
PRKCSH-218ENST00000593053 IGKV3OR2-268A0A0C4DH90 116 aa8.44□□□□□ -1.06
PRKCSH-218ENST00000593053 hDV102S1A0JD36 115 aa8.44□□□□□ -1.06
PRKCSH-218ENST00000593053 SDHAF1A6NFY7 115 aa8.44□□□□□ -1.06
PRKCSH-218ENST00000593053 J3QL48 77 aa8.44□□□□□ -1.06
PRKCSH-218ENST00000593053 PPP1R2P9O14990 202 aa8.44□□□□□ -1.06
PRKCSH-218ENST00000593053 AMMECR1LQ6DCA0 310 aa8.44□□□□□ -1.06
PRKCSH-218ENST00000593053 BORCS7Q96B45 105 aa8.44□□□□□ -1.06
PRKCSH-218ENST00000593053 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.43□□□□□ -1.06
PRKCSH-218ENST00000593053 IGKV2-29A2NJV5 120 aaPredicted RBP8.43□□□□□ -1.06
PRKCSH-218ENST00000593053 NCR2O95944 276 aa8.43□□□□□ -1.06
PRKCSH-218ENST00000593053 APCSP02743 223 aa8.43□□□□□ -1.06
PRKCSH-218ENST00000593053 TSKUQ8WUA8 353 aa8.43□□□□□ -1.06
PRKCSH-218ENST00000593053 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.43□□□□□ -1.06
PRKCSH-218ENST00000593053 SMIM27A0A1W2PRY6 76 aa8.42□□□□□ -1.06
PRKCSH-218ENST00000593053 GAGE12HA6NDE8 117 aa8.42□□□□□ -1.06
PRKCSH-218ENST00000593053 HIGD1CA8MV81 97 aa8.42□□□□□ -1.06
PRKCSH-218ENST00000593053 PMCHP20382 165 aa8.42□□□□□ -1.06
PRKCSH-218ENST00000593053 KRTAP10-4P60372 401 aaPredicted RBP8.42□□□□□ -1.06
PRKCSH-218ENST00000593053 CNBPP62633 177 aaKnown RBP8.42□□□□□ -1.06
PRKCSH-218ENST00000593053 RNASEKQ6P5S7 137 aaKnown RBP8.42□□□□□ -1.06
PRKCSH-218ENST00000593053 SDIM1Q6ZPB5 146 aa8.42□□□□□ -1.06
PRKCSH-218ENST00000593053 TRBV24-1A0A075B6N3 115 aa8.41□□□□□ -1.06
PRKCSH-218ENST00000593053 TRBV6-5A0A0K0K1A5 114 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms