RNA–Protein interactions for RNA: ENST00000585974.1

ZNF560-202, Transcript of zinc finger protein 560, humanhuman

TSL 3

Gene ZNF560, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-202ENST00000585974 LINC00869P0C866 280 aa1.84□□□□□ -2.11
ZNF560-202ENST00000585974 RPL7P18124 248 aaKnown RBP1.84□□□□□ -2.11
ZNF560-202ENST00000585974 CXCL2P19875 107 aa1.84□□□□□ -2.11
ZNF560-202ENST00000585974 S100A5P33763 92 aa1.84□□□□□ -2.11
ZNF560-202ENST00000585974 KRTAP12-4P60329 112 aa1.84□□□□□ -2.11
ZNF560-202ENST00000585974 GABARAPL2P60520 117 aa1.84□□□□□ -2.11
ZNF560-202ENST00000585974 HIST1H1AQ02539 215 aaPredicted RBP1.84□□□□□ -2.11
ZNF560-202ENST00000585974 ZNF90Q03938 601 aa1.84□□□□□ -2.11
ZNF560-202ENST00000585974 NMSQ5H8A3 153 aa1.84□□□□□ -2.11
ZNF560-202ENST00000585974 IBA57Q5T440 356 aaKnown RBP1.84□□□□□ -2.11
ZNF560-202ENST00000585974 SLC51BQ86UW2 128 aa1.84□□□□□ -2.11
ZNF560-202ENST00000585974 ZFP82Q8N141 532 aa1.84□□□□□ -2.11
ZNF560-202ENST00000585974 ZNF431Q8TF32 576 aaPredicted RBP1.84□□□□□ -2.11
ZNF560-202ENST00000585974 LINC01600Q96MT4 127 aa1.84□□□□□ -2.11
ZNF560-202ENST00000585974 ODF3Q96PU9 254 aa1.84□□□□□ -2.11
ZNF560-202ENST00000585974 TP53RKQ96S44 253 aa1.84□□□□□ -2.11
ZNF560-202ENST00000585974 SH3BGRL3Q9H299 93 aa1.84□□□□□ -2.11
ZNF560-202ENST00000585974 NDUFB11Q9NX14 153 aa1.84□□□□□ -2.11
ZNF560-202ENST00000585974 TRAV12-3A0A0B4J271 114 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 MEIS3P1A6NDR6 274 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 CRYM-AS1A6NIL9 109 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 B4DEV8 164 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 C9JCJ5 164 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 OR7C2O60412 319 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 SLC25A5P05141 298 aaKnown RBP1.83□□□□□ -2.12
ZNF560-202ENST00000585974 PFN1P07737 140 aaKnown RBP1.83□□□□□ -2.12
ZNF560-202ENST00000585974 NMBP08949 121 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 ORM2P19652 201 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 H2BFSP57053 126 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 PIGPP57054 158 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 ZNF846Q147U1 533 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 SP6Q3SY56 376 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 LELP1Q5T871 98 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 C1orf195Q5TG92 126 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 EIF4E3Q8N5X7 224 aaKnown RBP1.83□□□□□ -2.12
ZNF560-202ENST00000585974 MIR7-3HGQ8N6C7 128 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 OR5H6Q8NGV6 325 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 ATP6V0E2Q8NHE4 81 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 RNASE11Q8TAA1 199 aaKnown RBP1.83□□□□□ -2.12
ZNF560-202ENST00000585974 SHANK2-AS3Q9BTD1 123 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 TMEM147Q9BVK8 224 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 FXYD6Q9H0Q3 95 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 TMEM222Q9H0R3 208 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 TXNL4BQ9NX01 149 aaKnown RBP1.83□□□□□ -2.12
ZNF560-202ENST00000585974 COPZ2Q9P299 210 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 SSR3Q9UNL2 185 aa1.83□□□□□ -2.12
ZNF560-202ENST00000585974 IGKV1OR2-108A0A075B7D4 117 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 TRAV8-1A0A0A6YYK1 113 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 PIGBOS1A0A0B4J2F0 54 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 SMIM31A0A1B0GVY4 71 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 C7orf66A4D0T2 115 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 GGTLC3B5MD39 225 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 K7EPK0 472 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 HYPMO75409 117 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 HIST1H1EP10412 219 aaKnown RBP1.82□□□□□ -2.12
ZNF560-202ENST00000585974 NTF3P20783 257 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 SDC2P34741 201 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 POLR2GP62487 172 aaKnown RBP eCLIP1.82□□□□□ -2.12
ZNF560-202ENST00000585974 WFDC2Q14508 124 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 LCN15Q6UWW0 184 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 SCGB1D4Q6XE38 83 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 ATP5L2Q7Z4Y8 100 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 DAZ4Q86SG3 579 aaKnown RBP1.82□□□□□ -2.12
ZNF560-202ENST00000585974 LHFPL1Q86WI0 220 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 TMEM75Q8N9X5 138 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 TERB2Q8NHR7 220 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 SLC50A1Q9BRV3 221 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 KCNIP2Q9NS61 270 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 HIGD1AQ9Y241 93 aa1.82□□□□□ -2.12
ZNF560-202ENST00000585974 LRP1Q07954 4544 aaKnown RBP1.82□□□□□ -2.12
ZNF560-202ENST00000585974 C7orf71A4D174 169 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 TMEM250H0YL14 139 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 H3BRN7 92 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 K7ERS5 55 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 LECT2O14960 151 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 IGHV3-53P01767 116 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 IGHV3-30P01768 117 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 IGHV3-33P01772 117 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 TCRBP04435 133 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 IL5P05113 134 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 GPX1P07203 203 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 OR5G3P0C626 314 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 SULT1A3P0DMM9 295 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 SULT1A4P0DMN0 295 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 IGHV3-30-3P0DP02 117 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 IGHV3-30-5P0DP03 117 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 RNASE4P34096 147 aaKnown RBP1.81□□□□□ -2.12
ZNF560-202ENST00000585974 SMCO1Q147U7 214 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 JOSD1Q15040 202 aaPredicted RBP1.81□□□□□ -2.12
ZNF560-202ENST00000585974 GUK1Q16774 197 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 BPIFA4PQ86YQ2 179 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 GTSF1LQ9H1H1 148 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 MRPL16Q9NX20 251 aaKnown RBP1.81□□□□□ -2.12
ZNF560-202ENST00000585974 LSM5Q9Y4Y9 91 aaKnown RBP1.81□□□□□ -2.12
ZNF560-202ENST00000585974 PXMP4Q9Y6I8 212 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 LRP2P98164 4655 aa1.81□□□□□ -2.12
ZNF560-202ENST00000585974 A0A087WWC5 75 aa1.8□□□□□ -2.12
ZNF560-202ENST00000585974 TRAV4A0A0B4J268 109 aa1.8□□□□□ -2.12
ZNF560-202ENST00000585974 TRBV6-4A0A1B0GX49 114 aa1.8□□□□□ -2.12
ZNF560-202ENST00000585974 A6NED7 52 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms