RNA–Protein interactions for RNA: ENST00000585974.1

ZNF560-202, Transcript of zinc finger protein 560, humanhuman

TSL 3

Gene ZNF560, Length 516 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-202ENST00000585974 AEBP2Q6ZN18 517 aaPredicted RBP24.87■■□□□ 1.57
ZNF560-202ENST00000585974 CHIC1Q5VXU3 224 aa24.12■■□□□ 1.45
ZNF560-202ENST00000585974 SENP3Q9H4L4 574 aaPredicted RBP21.31■■□□□ 1
ZNF560-202ENST00000585974 PHF23Q9BUL5 403 aaPredicted RBP21.09■□□□□ 0.97
ZNF560-202ENST00000585974 FOXD1Q16676 465 aa19.7■□□□□ 0.74
ZNF560-202ENST00000585974 PLPPR3Q6T4P5 718 aa19.51■□□□□ 0.71
ZNF560-202ENST00000585974 PPP6R1Q9UPN7 881 aa18.68■□□□□ 0.58
ZNF560-202ENST00000585974 ADRA2BP18089 450 aa18.65■□□□□ 0.58
ZNF560-202ENST00000585974 PIAS4Q8N2W9 510 aaPredicted RBP18.52■□□□□ 0.56
ZNF560-202ENST00000585974 MSH5O43196 834 aa18.41■□□□□ 0.54
ZNF560-202ENST00000585974 SCAF1Q9H7N4 1312 aaKnown RBP17.29■□□□□ 0.36
ZNF560-202ENST00000585974 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
ZNF560-202ENST00000585974 PPP4R3CPQ6ZMV5 832 aa17.1■□□□□ 0.33
ZNF560-202ENST00000585974 MAPK8IP2Q13387 824 aaPredicted RBP16.98■□□□□ 0.31
ZNF560-202ENST00000585974 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
ZNF560-202ENST00000585974 CNKSR2Q8WXI2 1034 aa16.75■□□□□ 0.27
ZNF560-202ENST00000585974 NCBP3Q53F19 620 aaKnown RBP16.68■□□□□ 0.26
ZNF560-202ENST00000585974 HOXD11P31277 338 aaPredicted RBP16.49■□□□□ 0.23
ZNF560-202ENST00000585974 RNF216Q9NWF9 866 aaPredicted RBP16.49■□□□□ 0.23
ZNF560-202ENST00000585974 NPM3O75607 178 aaKnown RBP16.29■□□□□ 0.2
ZNF560-202ENST00000585974 KCNA4P22459 653 aa16.29■□□□□ 0.2
ZNF560-202ENST00000585974 DCAF8L1A6NGE4 600 aa16.12■□□□□ 0.17
ZNF560-202ENST00000585974 DNAJC5BQ9UF47 199 aa16.06■□□□□ 0.16
ZNF560-202ENST00000585974 RNF39Q9H2S5 420 aa15.69■□□□□ 0.1
ZNF560-202ENST00000585974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.68■□□□□ 0.1
ZNF560-202ENST00000585974 C1QBPQ07021 282 aaKnown RBP15.56■□□□□ 0.08
ZNF560-202ENST00000585974 SLC4A1APQ9BWU0 796 aaKnown RBP15.53■□□□□ 0.08
ZNF560-202ENST00000585974 CACNB1Q02641 598 aaPredicted RBP15.48■□□□□ 0.07
ZNF560-202ENST00000585974 SLC4A2P04920 1241 aa15.43■□□□□ 0.06
ZNF560-202ENST00000585974 U3KPZ7 1027 aaPredicted RBP15.34■□□□□ 0.05
ZNF560-202ENST00000585974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.24■□□□□ 0.03
ZNF560-202ENST00000585974 HNRNPUL2Q1KMD3 747 aaKnown RBP15.24■□□□□ 0.03
ZNF560-202ENST00000585974 APLP2Q06481 763 aa15.18■□□□□ 0.02
ZNF560-202ENST00000585974 FOXD4L1Q9NU39 408 aa15.17■□□□□ 0.02
ZNF560-202ENST00000585974 MYCNP04198 464 aaPredicted RBP15.14■□□□□ 0.01
ZNF560-202ENST00000585974 SAMD1Q6SPF0 538 aaPredicted RBP15.12■□□□□ 0.01
ZNF560-202ENST00000585974 CAPN15O75808 1086 aa14.96□□□□□ -0.01
ZNF560-202ENST00000585974 SPINK5Q9NQ38 1064 aaPredicted RBP14.96□□□□□ -0.01
ZNF560-202ENST00000585974 ZBTB22O15209 634 aa14.93□□□□□ -0.02
ZNF560-202ENST00000585974 ZNF219Q9P2Y4 722 aaPredicted RBP14.92□□□□□ -0.02
ZNF560-202ENST00000585974 TRHP20396 242 aaPredicted RBP14.81□□□□□ -0.04
ZNF560-202ENST00000585974 DSG3P32926 999 aa14.81□□□□□ -0.04
ZNF560-202ENST00000585974 ATXN8OSP0DMR3 200 aa14.78□□□□□ -0.04
ZNF560-202ENST00000585974 CSRNP3Q8WYN3 585 aa14.68□□□□□ -0.06
ZNF560-202ENST00000585974 EHMT2Q96KQ7 1210 aa14.62□□□□□ -0.07
ZNF560-202ENST00000585974 ATF5Q9Y2D1 282 aaPredicted RBP14.59□□□□□ -0.07
ZNF560-202ENST00000585974 ABCB7O75027 752 aa14.58□□□□□ -0.08
ZNF560-202ENST00000585974 POLA2Q14181 598 aa14.53□□□□□ -0.08
ZNF560-202ENST00000585974 ZBTB12Q9Y330 459 aaPredicted RBP14.42□□□□□ -0.1
ZNF560-202ENST00000585974 RBM42Q9BTD8 480 aaKnown RBP14.24□□□□□ -0.13
ZNF560-202ENST00000585974 FBLN2P98095 1184 aa14.18□□□□□ -0.14
ZNF560-202ENST00000585974 OSCARQ8IYS5 282 aa13.99□□□□□ -0.17
ZNF560-202ENST00000585974 MKRN4PQ13434 485 aaPredicted RBP13.98□□□□□ -0.17
ZNF560-202ENST00000585974 AKT1S1Q96B36 256 aa13.97□□□□□ -0.17
ZNF560-202ENST00000585974 SPDYE2BA6NHP3 402 aa13.96□□□□□ -0.17
ZNF560-202ENST00000585974 SPDYE6P0CI01 402 aa13.96□□□□□ -0.17
ZNF560-202ENST00000585974 SPDYE2Q495Y8 402 aa13.96□□□□□ -0.17
ZNF560-202ENST00000585974 ZNF692Q9BU19 519 aaPredicted RBP13.8□□□□□ -0.2
ZNF560-202ENST00000585974 SSUH2Q9Y2M2 353 aa13.77□□□□□ -0.21
ZNF560-202ENST00000585974 REM2Q8IYK8 340 aaPredicted RBP13.76□□□□□ -0.21
ZNF560-202ENST00000585974 CHRDL2Q6WN34 429 aa13.66□□□□□ -0.22
ZNF560-202ENST00000585974 SPDYE4A6NLX3 237 aa13.6□□□□□ -0.23
ZNF560-202ENST00000585974 SPDYE1Q8NFV5 336 aaPredicted RBP13.6□□□□□ -0.23
ZNF560-202ENST00000585974 PABPN1Q86U42 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
ZNF560-202ENST00000585974 PITPNM1O00562 1244 aa13.56□□□□□ -0.24
ZNF560-202ENST00000585974 POTEHQ6S545 545 aa13.55□□□□□ -0.24
ZNF560-202ENST00000585974 CLEC11AQ9Y240 323 aa13.45□□□□□ -0.26
ZNF560-202ENST00000585974 STAG3Q9UJ98 1225 aa13.44□□□□□ -0.26
ZNF560-202ENST00000585974 FXR2P51116 673 aaKnown RBP eCLIP13.43□□□□□ -0.26
ZNF560-202ENST00000585974 PIP4P2Q8N4L2 257 aa13.4□□□□□ -0.26
ZNF560-202ENST00000585974 PROM2Q8N271 834 aa13.37□□□□□ -0.27
ZNF560-202ENST00000585974 PRR29P0C7W0 189 aa13.36□□□□□ -0.27
ZNF560-202ENST00000585974 FKBP8Q14318 412 aa13.28□□□□□ -0.28
ZNF560-202ENST00000585974 PRKAR2AP13861 404 aaKnown RBP13.24□□□□□ -0.29
ZNF560-202ENST00000585974 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
ZNF560-202ENST00000585974 CREBZFQ9NS37 354 aa13.07□□□□□ -0.32
ZNF560-202ENST00000585974 HAX1O00165 279 aa13.06□□□□□ -0.32
ZNF560-202ENST00000585974 FBXO3Q9UK99 471 aa13.06□□□□□ -0.32
ZNF560-202ENST00000585974 FARP1Q9Y4F1 1045 aaPredicted RBP13.05□□□□□ -0.32
ZNF560-202ENST00000585974 PLEKHG5O94827 1062 aa13.01□□□□□ -0.33
ZNF560-202ENST00000585974 C19orf67A6NJJ6 358 aa12.98□□□□□ -0.33
ZNF560-202ENST00000585974 NPM1P06748 294 aaKnown RBP eCLIP12.97□□□□□ -0.33
ZNF560-202ENST00000585974 MIER1Q8N108 512 aa12.93□□□□□ -0.34
ZNF560-202ENST00000585974 SP7Q8TDD2 431 aaPredicted RBP12.91□□□□□ -0.34
ZNF560-202ENST00000585974 MNX1P50219 401 aaPredicted RBP12.89□□□□□ -0.35
ZNF560-202ENST00000585974 PLCD3Q8N3E9 789 aa12.89□□□□□ -0.35
ZNF560-202ENST00000585974 ZBTB47Q9UFB7 747 aaPredicted RBP12.88□□□□□ -0.35
ZNF560-202ENST00000585974 CD44P16070 742 aaKnown RBP12.85□□□□□ -0.35
ZNF560-202ENST00000585974 CLCN6P51797 869 aa12.84□□□□□ -0.35
ZNF560-202ENST00000585974 EVX2Q03828 476 aa12.82□□□□□ -0.36
ZNF560-202ENST00000585974 PAK3O75914 559 aaPredicted RBP12.81□□□□□ -0.36
ZNF560-202ENST00000585974 VASPP50552 380 aaPredicted RBP12.77□□□□□ -0.37
ZNF560-202ENST00000585974 ZRANB1Q9UGI0 708 aa12.73□□□□□ -0.37
ZNF560-202ENST00000585974 ZNF579Q8NAF0 562 aaKnown RBP12.72□□□□□ -0.37
ZNF560-202ENST00000585974 GABBR2O75899 941 aa12.66□□□□□ -0.38
ZNF560-202ENST00000585974 NUBP1P53384 320 aa12.62□□□□□ -0.39
ZNF560-202ENST00000585974 KLHL34Q8N239 644 aa12.62□□□□□ -0.39
ZNF560-202ENST00000585974 TSPYL2Q9H2G4 693 aaPredicted RBP12.6□□□□□ -0.39
ZNF560-202ENST00000585974 RASEFQ8IZ41 740 aa12.59□□□□□ -0.39
ZNF560-202ENST00000585974 FAM212AQ96EL1 285 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms