RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 HLA-DQA1P01909 254 aa7.25□□□□□ -1.25
CCDC47-206ENST00000584112 RBX1P62877 108 aa7.25□□□□□ -1.25
CCDC47-206ENST00000584112 GAGE6Q13070 117 aa7.25□□□□□ -1.25
CCDC47-206ENST00000584112 LINC01620Q4KN68 170 aa7.25□□□□□ -1.25
CCDC47-206ENST00000584112 LYZL1Q6UWQ5 148 aa7.25□□□□□ -1.25
CCDC47-206ENST00000584112 PRR34Q9NV39 138 aa7.25□□□□□ -1.25
CCDC47-206ENST00000584112 NTF3P20783 257 aa7.24□□□□□ -1.25
CCDC47-206ENST00000584112 CTRLP40313 264 aa7.24□□□□□ -1.25
CCDC47-206ENST00000584112 NKX2-5P52952 324 aaPredicted RBP7.24□□□□□ -1.25
CCDC47-206ENST00000584112 SCXQ7RTU7 201 aa7.24□□□□□ -1.25
CCDC47-206ENST00000584112 AKAP14Q86UN6 197 aa7.24□□□□□ -1.25
CCDC47-206ENST00000584112 LINC00269Q8N2A0 174 aa7.24□□□□□ -1.25
CCDC47-206ENST00000584112 C9orf62Q8N4C0 152 aa7.24□□□□□ -1.25
CCDC47-206ENST00000584112 NUDT10Q8NFP7 164 aa7.24□□□□□ -1.25
CCDC47-206ENST00000584112 NUDT11Q96G61 164 aa7.24□□□□□ -1.25
CCDC47-206ENST00000584112 NIT2Q9NQR4 276 aa7.24□□□□□ -1.25
CCDC47-206ENST00000584112 USP17L23D6RBM5 183 aa7.23□□□□□ -1.25
CCDC47-206ENST00000584112 BLOC1S1P78537 153 aa7.23□□□□□ -1.25
CCDC47-206ENST00000584112 TWIST1Q15672 202 aa7.23□□□□□ -1.25
CCDC47-206ENST00000584112 CLPSL2Q6UWE3 100 aa7.23□□□□□ -1.25
CCDC47-206ENST00000584112 ANAPC16Q96DE5 110 aa7.23□□□□□ -1.25
CCDC47-206ENST00000584112 PGLYRP4Q96LB8 373 aa7.23□□□□□ -1.25
CCDC47-206ENST00000584112 TMEM243Q9BU79 118 aa7.23□□□□□ -1.25
CCDC47-206ENST00000584112 CHAC1Q9BUX1 264 aa7.23□□□□□ -1.25
CCDC47-206ENST00000584112 CNFNQ9BYD5 112 aa7.23□□□□□ -1.25
CCDC47-206ENST00000584112 RPP21Q9H633 154 aaKnown RBP7.23□□□□□ -1.25
CCDC47-206ENST00000584112 A0A1B0GUV1 79 aa7.22□□□□□ -1.25
CCDC47-206ENST00000584112 TMEM250H0YL14 139 aa7.22□□□□□ -1.25
CCDC47-206ENST00000584112 UBE2L6O14933 153 aa7.22□□□□□ -1.25
CCDC47-206ENST00000584112 REG3AQ06141 175 aa7.22□□□□□ -1.25
CCDC47-206ENST00000584112 DGAT2L7PQ6IED9 249 aa7.22□□□□□ -1.25
CCDC47-206ENST00000584112 Q6ZNX1 250 aa7.22□□□□□ -1.25
CCDC47-206ENST00000584112 SMIM15Q7Z3B0 74 aa7.22□□□□□ -1.25
CCDC47-206ENST00000584112 RNASE7Q9H1E1 156 aaKnown RBP7.22□□□□□ -1.25
CCDC47-206ENST00000584112 TRAV8-4A0A0B4J246 113 aa7.21□□□□□ -1.26
CCDC47-206ENST00000584112 K7EN84 100 aa7.21□□□□□ -1.26
CCDC47-206ENST00000584112 COTL1Q14019 142 aa7.21□□□□□ -1.26
CCDC47-206ENST00000584112 OCC1Q8TAD7 63 aa7.21□□□□□ -1.26
CCDC47-206ENST00000584112 MRPL18Q9H0U6 180 aaKnown RBP7.21□□□□□ -1.26
CCDC47-206ENST00000584112 AMTP48728 403 aa7.2□□□□□ -1.26
CCDC47-206ENST00000584112 HNRNPA3P51991 378 aaKnown RBP7.2□□□□□ -1.26
CCDC47-206ENST00000584112 KRTAP26-1Q6PEX3 210 aa7.2□□□□□ -1.26
CCDC47-206ENST00000584112 TEX261Q6UWH6 196 aa7.2□□□□□ -1.26
CCDC47-206ENST00000584112 ALKAL2Q6UX46 152 aa7.2□□□□□ -1.26
CCDC47-206ENST00000584112 CLRN3Q8NCR9 226 aa7.2□□□□□ -1.26
CCDC47-206ENST00000584112 CIRBP-AS1Q8TBR5 109 aa7.2□□□□□ -1.26
CCDC47-206ENST00000584112 IGLV10-54A0A075B6I4 117 aa7.19□□□□□ -1.26
CCDC47-206ENST00000584112 A0A0U1RQV1 116 aa7.19□□□□□ -1.26
CCDC47-206ENST00000584112 A8MWL6 223 aa7.19□□□□□ -1.26
CCDC47-206ENST00000584112 GATCO43716 136 aaKnown RBP7.19□□□□□ -1.26
CCDC47-206ENST00000584112 PRSS1P07477 247 aa7.19□□□□□ -1.26
CCDC47-206ENST00000584112 FAM231DQ6ZW35 169 aa7.19□□□□□ -1.26
CCDC47-206ENST00000584112 C20orf203Q8NBC4 194 aa7.19□□□□□ -1.26
CCDC47-206ENST00000584112 IGLV4-60A0A075B6I1 120 aa7.18□□□□□ -1.26
CCDC47-206ENST00000584112 C9orf163Q8N9P6 203 aa7.18□□□□□ -1.26
CCDC47-206ENST00000584112 GATD1Q8NB37 220 aa7.18□□□□□ -1.26
CCDC47-206ENST00000584112 LYPD6BQ8NI32 183 aa7.18□□□□□ -1.26
CCDC47-206ENST00000584112 hCG_2014768A0A024R1R8 64 aa7.17□□□□□ -1.26
CCDC47-206ENST00000584112 hDV102S1A0JD36 115 aa7.17□□□□□ -1.26
CCDC47-206ENST00000584112 NDUFS6O75380 124 aaKnown RBP7.17□□□□□ -1.26
CCDC47-206ENST00000584112 NCR2O95944 276 aa7.17□□□□□ -1.26
CCDC47-206ENST00000584112 CEBPGP53567 150 aa7.17□□□□□ -1.26
CCDC47-206ENST00000584112 CT83Q5H943 113 aa7.17□□□□□ -1.26
CCDC47-206ENST00000584112 GTSF1Q8WW33 167 aa7.17□□□□□ -1.26
CCDC47-206ENST00000584112 BORCS7Q96B45 105 aa7.17□□□□□ -1.26
CCDC47-206ENST00000584112 TRAV26-2A0A0B4J265 109 aa7.16□□□□□ -1.26
CCDC47-206ENST00000584112 H7C423 109 aa7.16□□□□□ -1.26
CCDC47-206ENST00000584112 AMMECR1LQ6DCA0 310 aa7.16□□□□□ -1.26
CCDC47-206ENST00000584112 SMIM7Q9BQ49 75 aa7.16□□□□□ -1.26
CCDC47-206ENST00000584112 EIF5A2Q9GZV4 153 aaKnown RBP7.16□□□□□ -1.26
CCDC47-206ENST00000584112 GFRA4Q9GZZ7 299 aa7.16□□□□□ -1.26
CCDC47-206ENST00000584112 AP5S1Q9NUS5 200 aa7.16□□□□□ -1.26
CCDC47-206ENST00000584112 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.15□□□□□ -1.26
CCDC47-206ENST00000584112 SDHAF1A6NFY7 115 aa7.15□□□□□ -1.26
CCDC47-206ENST00000584112 APCSP02743 223 aa7.15□□□□□ -1.26
CCDC47-206ENST00000584112 FOXA3P55318 350 aaPredicted RBP7.15□□□□□ -1.26
CCDC47-206ENST00000584112 CNBPP62633 177 aaKnown RBP7.15□□□□□ -1.26
CCDC47-206ENST00000584112 RPL39LQ96EH5 51 aaKnown RBP7.15□□□□□ -1.26
CCDC47-206ENST00000584112 CFAP161Q6P656 301 aa7.14□□□□□ -1.27
CCDC47-206ENST00000584112 FAM210AQ96ND0 272 aa7.14□□□□□ -1.27
CCDC47-206ENST00000584112 IGHV3-64A0A075B6Q5 118 aa7.13□□□□□ -1.27
CCDC47-206ENST00000584112 TRBV6-5A0A0K0K1A5 114 aa7.13□□□□□ -1.27
CCDC47-206ENST00000584112 A0A1B0GUT8 65 aa7.13□□□□□ -1.27
CCDC47-206ENST00000584112 FAM231BA6NCW3 169 aa7.13□□□□□ -1.27
CCDC47-206ENST00000584112 ZNF727A8MUV8 499 aa7.13□□□□□ -1.27
CCDC47-206ENST00000584112 I3L3M4 83 aa7.13□□□□□ -1.27
CCDC47-206ENST00000584112 ZNF25P17030 456 aaPredicted RBP7.13□□□□□ -1.27
CCDC47-206ENST00000584112 PMCHP20382 165 aa7.13□□□□□ -1.27
CCDC47-206ENST00000584112 RPL37AP61513 92 aaKnown RBP7.13□□□□□ -1.27
CCDC47-206ENST00000584112 RNASEKQ6P5S7 137 aaKnown RBP7.13□□□□□ -1.27
CCDC47-206ENST00000584112 SDIM1Q6ZPB5 146 aa7.13□□□□□ -1.27
CCDC47-206ENST00000584112 LINC01551Q86U37 167 aa7.13□□□□□ -1.27
CCDC47-206ENST00000584112 TSKUQ8WUA8 353 aa7.13□□□□□ -1.27
CCDC47-206ENST00000584112 IGKV3OR2-268A0A0C4DH90 116 aa7.12□□□□□ -1.27
CCDC47-206ENST00000584112 GAGE12HA6NDE8 117 aa7.12□□□□□ -1.27
CCDC47-206ENST00000584112 HIGD1CA8MV81 97 aa7.12□□□□□ -1.27
CCDC47-206ENST00000584112 BTF3L4Q96K17 158 aa7.12□□□□□ -1.27
CCDC47-206ENST00000584112 TMEM191AQ9H0A3 160 aa7.12□□□□□ -1.27
CCDC47-206ENST00000584112 ST20Q9HBF5 79 aa7.12□□□□□ -1.27
CCDC47-206ENST00000584112 OSTCQ9NRP0 149 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms